RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 ABHD15Q6UXT9 468 aa12.74□□□□□ -0.37
SLIRP-212ENST00000613856 SV2BQ7L1I2 683 aa12.74□□□□□ -0.37
SLIRP-212ENST00000613856 CYFIP1Q7L576 1253 aa12.74□□□□□ -0.37
SLIRP-212ENST00000613856 FAM126BQ8IXS8 530 aa12.74□□□□□ -0.37
SLIRP-212ENST00000613856 GRAMD1CQ8IYS0 662 aa12.74□□□□□ -0.37
SLIRP-212ENST00000613856 ATP6V0A1Q93050 837 aa12.74□□□□□ -0.37
SLIRP-212ENST00000613856 C7orf25Q9BPX7 421 aa12.74□□□□□ -0.37
SLIRP-212ENST00000613856 ZSWIM4Q9H7M6 989 aa12.74□□□□□ -0.37
SLIRP-212ENST00000613856 ZHX1Q9UKY1 873 aaPredicted RBP12.74□□□□□ -0.37
SLIRP-212ENST00000613856 DNM3Q9UQ16 869 aa12.74□□□□□ -0.37
SLIRP-212ENST00000613856 SAMM50Q9Y512 469 aa12.74□□□□□ -0.37
SLIRP-212ENST00000613856 MYH11P35749 1972 aa12.73□□□□□ -0.37
SLIRP-212ENST00000613856 IGKV6D-21A0A0A0MT36 114 aa12.73□□□□□ -0.37
SLIRP-212ENST00000613856 ASGR1P07306 291 aa12.73□□□□□ -0.37
SLIRP-212ENST00000613856 PLA2G4BP0C869 781 aa12.73□□□□□ -0.37
SLIRP-212ENST00000613856 AFMP43652 599 aa12.73□□□□□ -0.37
SLIRP-212ENST00000613856 SLC12A3P55017 1021 aa12.73□□□□□ -0.37
SLIRP-212ENST00000613856 PSMC5P62195 406 aa12.73□□□□□ -0.37
SLIRP-212ENST00000613856 TYRO3Q06418 890 aa12.73□□□□□ -0.37
SLIRP-212ENST00000613856 PPIGQ13427 754 aaKnown RBP eCLIP12.73□□□□□ -0.37
SLIRP-212ENST00000613856 MCM6Q14566 821 aa12.73□□□□□ -0.37
SLIRP-212ENST00000613856 LY6KQ17RY6 165 aa12.73□□□□□ -0.37
SLIRP-212ENST00000613856 IQSEC1Q6DN90 963 aa12.73□□□□□ -0.37
SLIRP-212ENST00000613856 SASS6Q6UVJ0 657 aa12.73□□□□□ -0.37
SLIRP-212ENST00000613856 TPH2Q8IWU9 490 aa12.73□□□□□ -0.37
SLIRP-212ENST00000613856 C4orf19Q8IY42 314 aa12.73□□□□□ -0.37
SLIRP-212ENST00000613856 TRIML1Q8N9V2 468 aa12.73□□□□□ -0.37
SLIRP-212ENST00000613856 BANK1Q8NDB2 785 aa12.73□□□□□ -0.37
SLIRP-212ENST00000613856 SMARCE1Q969G3 411 aa12.73□□□□□ -0.37
SLIRP-212ENST00000613856 VWCEQ96DN2 955 aa12.73□□□□□ -0.37
SLIRP-212ENST00000613856 GSDMAQ96QA5 445 aa12.73□□□□□ -0.37
SLIRP-212ENST00000613856 NACC1Q96RE7 527 aa12.73□□□□□ -0.37
SLIRP-212ENST00000613856 TSEN34Q9BSV6 310 aaKnown RBP12.73□□□□□ -0.37
SLIRP-212ENST00000613856 TRIM9Q9C026 710 aa12.73□□□□□ -0.37
SLIRP-212ENST00000613856 BCAS3Q9H6U6 928 aa12.73□□□□□ -0.37
SLIRP-212ENST00000613856 PDGFCQ9NRA1 345 aa12.73□□□□□ -0.37
SLIRP-212ENST00000613856 WRAP73Q9P2S5 460 aaPredicted RBP12.73□□□□□ -0.37
SLIRP-212ENST00000613856 PCDHA5Q9Y5H7 936 aa12.73□□□□□ -0.37
SLIRP-212ENST00000613856 TRANK1O15050 2925 aa12.72□□□□□ -0.37
SLIRP-212ENST00000613856 EMSYQ7Z589 1322 aa12.72□□□□□ -0.37
SLIRP-212ENST00000613856 GSTTP1A0A1W2PQM5 241 aa12.72□□□□□ -0.37
SLIRP-212ENST00000613856 E9PMD0 336 aa12.72□□□□□ -0.37
SLIRP-212ENST00000613856 GH1P01241 217 aa12.72□□□□□ -0.37
SLIRP-212ENST00000613856 C6orf222P0C671 652 aaPredicted RBP12.72□□□□□ -0.37
SLIRP-212ENST00000613856 XRCC6P12956 609 aaKnown RBP eCLIP12.72□□□□□ -0.37
SLIRP-212ENST00000613856 ARHGAP1Q07960 439 aa12.72□□□□□ -0.37
SLIRP-212ENST00000613856 CUL4BQ13620 913 aa12.72□□□□□ -0.37
SLIRP-212ENST00000613856 LAMC2Q13753 1193 aa12.72□□□□□ -0.37
SLIRP-212ENST00000613856 STX1AQ16623 288 aa12.72□□□□□ -0.37
SLIRP-212ENST00000613856 UGCGQ16739 394 aa12.72□□□□□ -0.37
SLIRP-212ENST00000613856 DUSP28Q4G0W2 176 aa12.72□□□□□ -0.37
SLIRP-212ENST00000613856 OTOP2Q7RTS6 562 aa12.72□□□□□ -0.37
SLIRP-212ENST00000613856 CCDC60Q8IWA6 550 aaPredicted RBP12.72□□□□□ -0.37
SLIRP-212ENST00000613856 DHX37Q8IY37 1157 aaKnown RBP12.72□□□□□ -0.37
SLIRP-212ENST00000613856 SYT2Q8N9I0 419 aaPredicted RBP12.72□□□□□ -0.37
SLIRP-212ENST00000613856 AFAP1L1Q8TED9 768 aa12.72□□□□□ -0.37
SLIRP-212ENST00000613856 SEPT1Q8WYJ6 367 aa12.72□□□□□ -0.37
SLIRP-212ENST00000613856 GPR20Q99678 358 aa12.72□□□□□ -0.37
SLIRP-212ENST00000613856 TSPY26PQ9H489 355 aa12.72□□□□□ -0.37
SLIRP-212ENST00000613856 MLXIPQ9HAP2 919 aa12.72□□□□□ -0.37
SLIRP-212ENST00000613856 DBR1Q9UK59 544 aaKnown RBP12.72□□□□□ -0.37
SLIRP-212ENST00000613856 COL4A4P53420 1690 aaPredicted RBP12.71□□□□□ -0.37
SLIRP-212ENST00000613856 PTPRSQ13332 1948 aa12.71□□□□□ -0.37
SLIRP-212ENST00000613856 MOXD2PA6NHM9 499 aa12.71□□□□□ -0.37
SLIRP-212ENST00000613856 EPOPA6NHQ4 379 aa12.71□□□□□ -0.37
SLIRP-212ENST00000613856 MYMKA6NI61 221 aa12.71□□□□□ -0.37
SLIRP-212ENST00000613856 LGR5O75473 907 aa12.71□□□□□ -0.37
SLIRP-212ENST00000613856 ARHGEF15O94989 841 aa12.71□□□□□ -0.37
SLIRP-212ENST00000613856 CAVIN2O95810 425 aa12.71□□□□□ -0.37
SLIRP-212ENST00000613856 PSMC6P62333 389 aa12.71□□□□□ -0.37
SLIRP-212ENST00000613856 BEX3Q00994 111 aa12.71□□□□□ -0.37
SLIRP-212ENST00000613856 KCNB1Q14721 858 aa12.71□□□□□ -0.37
SLIRP-212ENST00000613856 CCDC144BQ3MJ40 725 aa12.71□□□□□ -0.37
SLIRP-212ENST00000613856 PPTC7Q8NI37 304 aa12.71□□□□□ -0.37
SLIRP-212ENST00000613856 HERVK_113Q902F9 699 aa12.71□□□□□ -0.37
SLIRP-212ENST00000613856 STAMQ92783 540 aa12.71□□□□□ -0.37
SLIRP-212ENST00000613856 ERCC4Q92889 916 aaPredicted RBP12.71□□□□□ -0.37
SLIRP-212ENST00000613856 LRFN3Q9BTN0 628 aa12.71□□□□□ -0.37
SLIRP-212ENST00000613856 GTPBP4Q9BZE4 634 aaKnown RBP12.71□□□□□ -0.37
SLIRP-212ENST00000613856 C11orf16Q9NQ32 467 aa12.71□□□□□ -0.37
SLIRP-212ENST00000613856 ANKEF1Q9NU02 776 aa12.71□□□□□ -0.37
SLIRP-212ENST00000613856 ANO10Q9NW15 660 aa12.71□□□□□ -0.37
SLIRP-212ENST00000613856 RMND1Q9NWS8 449 aa12.71□□□□□ -0.37
SLIRP-212ENST00000613856 KCND2Q9NZV8 630 aa12.71□□□□□ -0.37
SLIRP-212ENST00000613856 GABBR1Q9UBS5 961 aa12.71□□□□□ -0.37
SLIRP-212ENST00000613856 MAN1B1Q9UKM7 699 aa12.71□□□□□ -0.37
SLIRP-212ENST00000613856 MAFBQ9Y5Q3 323 aaPredicted RBP12.71□□□□□ -0.37
SLIRP-212ENST00000613856 GRIN2DO15399 1336 aa12.7□□□□□ -0.38
SLIRP-212ENST00000613856 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.7□□□□□ -0.38
SLIRP-212ENST00000613856 PVALEFA0A1B0GWK0 134 aa12.7□□□□□ -0.38
SLIRP-212ENST00000613856 FAM86C2PA6NEL3 165 aa12.7□□□□□ -0.38
SLIRP-212ENST00000613856 ARVCFO00192 962 aa12.7□□□□□ -0.38
SLIRP-212ENST00000613856 NOP56O00567 594 aaKnown RBP12.7□□□□□ -0.38
SLIRP-212ENST00000613856 KLRC4O43908 158 aa12.7□□□□□ -0.38
SLIRP-212ENST00000613856 ZNF862O60290 1169 aa12.7□□□□□ -0.38
SLIRP-212ENST00000613856 DUSP11O75319 330 aaKnown RBP12.7□□□□□ -0.38
SLIRP-212ENST00000613856 CD4P01730 458 aa12.7□□□□□ -0.38
SLIRP-212ENST00000613856 RPN1P04843 607 aaKnown RBP12.7□□□□□ -0.38
SLIRP-212ENST00000613856 HOXD8P13378 290 aaPredicted RBP12.7□□□□□ -0.38
SLIRP-212ENST00000613856 SMPD1P17405 629 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms