RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 MKRN4PQ13434 485 aaPredicted RBP29.13■■■□□ 2.25
VEGFA-226ENST00000611736 HSCBQ8IWL3 235 aa29.13■■■□□ 2.25
VEGFA-226ENST00000611736 NEK9Q8TD19 979 aa29.13■■■□□ 2.25
VEGFA-226ENST00000611736 INTS4Q96HW7 963 aaKnown RBP29.13■■■□□ 2.25
VEGFA-226ENST00000611736 CEP170P1Q96L14 293 aa29.13■■■□□ 2.25
VEGFA-226ENST00000611736 HSD17B14Q9BPX1 270 aa29.13■■■□□ 2.25
VEGFA-226ENST00000611736 SEMA6BQ9H3T3 888 aa29.13■■■□□ 2.25
VEGFA-226ENST00000611736 CHD7Q9P2D1 2997 aa29.13■■■□□ 2.25
VEGFA-226ENST00000611736 PCDHA11Q9Y5I1 949 aa29.13■■■□□ 2.25
VEGFA-226ENST00000611736 AMHP03971 560 aa29.12■■■□□ 2.25
VEGFA-226ENST00000611736 PDCP20941 246 aa29.12■■■□□ 2.25
VEGFA-226ENST00000611736 RILPL1Q5EBL4 403 aa29.12■■■□□ 2.25
VEGFA-226ENST00000611736 MYOCDQ8IZQ8 938 aa29.12■■■□□ 2.25
VEGFA-226ENST00000611736 ZNF579Q8NAF0 562 aaKnown RBP29.12■■■□□ 2.25
VEGFA-226ENST00000611736 USP38Q8NB14 1042 aa29.12■■■□□ 2.25
VEGFA-226ENST00000611736 OSMRQ99650 979 aa29.12■■■□□ 2.25
VEGFA-226ENST00000611736 MTMR10Q9NXD2 777 aa29.12■■■□□ 2.25
VEGFA-226ENST00000611736 TMEM265A0A087WTH1 108 aa29.11■■■□□ 2.25
VEGFA-226ENST00000611736 ZBTB39O15060 712 aa29.11■■■□□ 2.25
VEGFA-226ENST00000611736 PAK2Q13177 524 aa29.11■■■□□ 2.25
VEGFA-226ENST00000611736 DRP2Q13474 957 aa29.11■■■□□ 2.25
VEGFA-226ENST00000611736 TMEM266Q2M3C6 531 aa29.11■■■□□ 2.25
VEGFA-226ENST00000611736 FAM117BQ6P1L5 589 aa29.11■■■□□ 2.25
VEGFA-226ENST00000611736 ZNF668Q96K58 619 aaPredicted RBP29.11■■■□□ 2.25
VEGFA-226ENST00000611736 ZBED2Q9BTP6 218 aa29.11■■■□□ 2.25
VEGFA-226ENST00000611736 EIF4ENIF1Q9NRA8 985 aaKnown RBP29.11■■■□□ 2.25
VEGFA-226ENST00000611736 SQORQ9Y6N5 450 aa29.11■■■□□ 2.25
VEGFA-226ENST00000611736 LOC101059915A0A1B0GWI6 518 aaPredicted RBP29.1■■■□□ 2.25
VEGFA-226ENST00000611736 GPR32O75388 356 aa29.1■■■□□ 2.25
VEGFA-226ENST00000611736 MAFO75444 373 aaPredicted RBP29.1■■■□□ 2.25
VEGFA-226ENST00000611736 NLRP11P59045 1033 aaKnown RBP29.1■■■□□ 2.25
VEGFA-226ENST00000611736 XKR9Q5GH70 373 aa29.1■■■□□ 2.25
VEGFA-226ENST00000611736 OTUD6AQ7L8S5 288 aa29.1■■■□□ 2.25
VEGFA-226ENST00000611736 TMEM40Q8WWA1 233 aa29.1■■■□□ 2.25
VEGFA-226ENST00000611736 ZNF576Q9H609 170 aa29.1■■■□□ 2.25
VEGFA-226ENST00000611736 PADI3Q9ULW8 664 aa29.1■■■□□ 2.25
VEGFA-226ENST00000611736 NOC2LQ9Y3T9 749 aaKnown RBP29.1■■■□□ 2.25
VEGFA-226ENST00000611736 IGKV6-21A0A0C4DH24 114 aa29.09■■■□□ 2.25
VEGFA-226ENST00000611736 TLL1O43897 1013 aa29.09■■■□□ 2.25
VEGFA-226ENST00000611736 CRYBB1P53674 252 aaPredicted RBP29.09■■■□□ 2.25
VEGFA-226ENST00000611736 FERMT3Q86UX7 667 aa29.09■■■□□ 2.25
VEGFA-226ENST00000611736 BMP2KQ9NSY1 1161 aaPredicted RBP29.09■■■□□ 2.25
VEGFA-226ENST00000611736 ARID2Q68CP9 1835 aa29.08■■■□□ 2.25
VEGFA-226ENST00000611736 RPS6KA5O75582 802 aa29.08■■■□□ 2.25
VEGFA-226ENST00000611736 CA3P07451 260 aa29.08■■■□□ 2.25
VEGFA-226ENST00000611736 SYT1P21579 422 aa29.08■■■□□ 2.25
VEGFA-226ENST00000611736 DNM2P50570 870 aa29.08■■■□□ 2.25
VEGFA-226ENST00000611736 POLGP54098 1239 aaPredicted RBP29.08■■■□□ 2.25
VEGFA-226ENST00000611736 NFX1Q12986 1120 aaKnown RBP29.08■■■□□ 2.25
VEGFA-226ENST00000611736 ERMNQ8TAM6 284 aa29.08■■■□□ 2.25
VEGFA-226ENST00000611736 SCLT1Q96NL6 688 aa29.08■■■□□ 2.25
VEGFA-226ENST00000611736 GUCD1Q96NT3 240 aa29.08■■■□□ 2.25
VEGFA-226ENST00000611736 JPH2Q9BR39 696 aaPredicted RBP29.08■■■□□ 2.25
VEGFA-226ENST00000611736 ADAMTS10Q9H324 1103 aa29.08■■■□□ 2.25
VEGFA-226ENST00000611736 SLC28A3Q9HAS3 691 aa29.08■■■□□ 2.25
VEGFA-226ENST00000611736 A0A087WWV3 80 aa29.07■■■□□ 2.24
VEGFA-226ENST00000611736 MED24O75448 989 aa29.07■■■□□ 2.24
VEGFA-226ENST00000611736 LYPLA2O95372 231 aa29.07■■■□□ 2.24
VEGFA-226ENST00000611736 GJB5O95377 273 aa29.07■■■□□ 2.24
VEGFA-226ENST00000611736 SPATA31C1P0DKV0 1188 aa29.07■■■□□ 2.24
VEGFA-226ENST00000611736 FXR2P51116 673 aaKnown RBP eCLIP29.07■■■□□ 2.246e-18■■■□□ 18.2
VEGFA-226ENST00000611736 GPC3P51654 580 aa29.07■■■□□ 2.24
VEGFA-226ENST00000611736 PPP2R2DQ66LE6 453 aa29.07■■■□□ 2.24
VEGFA-226ENST00000611736 SLC7A3Q8WY07 619 aa29.07■■■□□ 2.24
VEGFA-226ENST00000611736 SUCLA2Q9P2R7 463 aaPredicted RBP29.07■■■□□ 2.24
VEGFA-226ENST00000611736 PPME1Q9Y570 386 aa29.07■■■□□ 2.24
VEGFA-226ENST00000611736 LAD1O00515 517 aa29.06■■■□□ 2.24
VEGFA-226ENST00000611736 UPP2O95045 317 aa29.06■■■□□ 2.24
VEGFA-226ENST00000611736 RFC5P40937 340 aa29.06■■■□□ 2.24
VEGFA-226ENST00000611736 BRAPQ7Z569 592 aa29.06■■■□□ 2.24
VEGFA-226ENST00000611736 CATSPER3Q86XQ3 398 aa29.06■■■□□ 2.24
VEGFA-226ENST00000611736 PIGOQ8TEQ8 1089 aa29.06■■■□□ 2.24
VEGFA-226ENST00000611736 NLRP7Q8WX94 980 aa29.06■■■□□ 2.24
VEGFA-226ENST00000611736 CCDC43Q96MW1 224 aaKnown RBP29.06■■■□□ 2.24
VEGFA-226ENST00000611736 DHX33Q9H6R0 707 aaKnown RBP29.06■■■□□ 2.24
VEGFA-226ENST00000611736 ERVK-5Q9HDB9 667 aa29.06■■■□□ 2.24
VEGFA-226ENST00000611736 TUFT1Q9NNX1 390 aa29.06■■■□□ 2.24
VEGFA-226ENST00000611736 ENPP3O14638 875 aa29.05■■■□□ 2.24
VEGFA-226ENST00000611736 GRIN2CQ14957 1233 aa29.05■■■□□ 2.24
VEGFA-226ENST00000611736 FAM228AQ86W67 206 aa29.05■■■□□ 2.24
VEGFA-226ENST00000611736 ZNF710Q8N1W2 664 aa29.05■■■□□ 2.24
VEGFA-226ENST00000611736 LINC01599Q8WXQ3 324 aa29.05■■■□□ 2.24
VEGFA-226ENST00000611736 RAD9AQ99638 391 aa29.05■■■□□ 2.24
VEGFA-226ENST00000611736 POLR3CQ9BUI4 534 aaPredicted RBP29.05■■■□□ 2.24
VEGFA-226ENST00000611736 FTHL17Q9BXU8 183 aa29.05■■■□□ 2.24
VEGFA-226ENST00000611736 TMX1Q9H3N1 280 aa29.05■■■□□ 2.24
VEGFA-226ENST00000611736 ANKEF1Q9NU02 776 aa29.05■■■□□ 2.24
VEGFA-226ENST00000611736 LRWD1Q9UFC0 647 aa29.05■■■□□ 2.24
VEGFA-226ENST00000611736 ST3GAL5Q9UNP4 418 aa29.05■■■□□ 2.24
VEGFA-226ENST00000611736 STXBP5LQ9Y2K9 1186 aa29.05■■■□□ 2.24
VEGFA-226ENST00000611736 COL6A3P12111 3177 aa29.05■■■□□ 2.24
VEGFA-226ENST00000611736 LCHNA4D1U4 455 aa29.04■■■□□ 2.24
VEGFA-226ENST00000611736 EMC2Q15006 297 aa29.04■■■□□ 2.24
VEGFA-226ENST00000611736 IL17AQ16552 155 aa29.04■■■□□ 2.24
VEGFA-226ENST00000611736 POTEGQ6S5H5 508 aa29.04■■■□□ 2.24
VEGFA-226ENST00000611736 DTHD1Q6ZMT9 781 aa29.04■■■□□ 2.24
VEGFA-226ENST00000611736 RHPN2Q8IUC4 686 aa29.04■■■□□ 2.24
VEGFA-226ENST00000611736 EXOC8Q8IYI6 725 aa29.04■■■□□ 2.24
VEGFA-226ENST00000611736 TOP1MTQ969P6 601 aa29.04■■■□□ 2.24
VEGFA-226ENST00000611736 TMEM143Q96AN5 459 aa29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms