RNA–Protein interactions for RNA: ENST00000610452.1

COL15A1-205, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL15A1, Length 5,422 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-205ENST00000610452 SOS2Q07890 1332 aaPredicted RBP21.56■■□□□ 1.04
COL15A1-205ENST00000610452 H0Y626 953 aa21.56■■□□□ 1.04
COL15A1-205ENST00000610452 CLIC2O15247 247 aa21.56■■□□□ 1.04
COL15A1-205ENST00000610452 TRIM16O95361 564 aa21.56■■□□□ 1.04
COL15A1-205ENST00000610452 RAD9BQ6WBX8 426 aa21.56■■□□□ 1.04
COL15A1-205ENST00000610452 TC2NQ8N9U0 490 aa21.56■■□□□ 1.04
COL15A1-205ENST00000610452 DDX17Q92841 729 aaKnown RBP21.56■■□□□ 1.04
COL15A1-205ENST00000610452 SLC52A2Q9HAB3 445 aa21.56■■□□□ 1.04
COL15A1-205ENST00000610452 P4HA1P13674 534 aa21.55■■□□□ 1.04
COL15A1-205ENST00000610452 WDR93Q6P2C0 686 aa21.55■■□□□ 1.04
COL15A1-205ENST00000610452 JDP2Q8WYK2 163 aa21.55■■□□□ 1.04
COL15A1-205ENST00000610452 ACSBG1Q96GR2 724 aa21.55■■□□□ 1.04
COL15A1-205ENST00000610452 DISC1Q9NRI5 854 aa21.55■■□□□ 1.04
COL15A1-205ENST00000610452 E2F6O75461 281 aa21.55■■□□□ 1.04
COL15A1-205ENST00000610452 ATP6V1B1P15313 513 aa21.55■■□□□ 1.04
COL15A1-205ENST00000610452 PRCPP42785 496 aa21.55■■□□□ 1.04
COL15A1-205ENST00000610452 NCAPHQ15003 741 aa21.55■■□□□ 1.04
COL15A1-205ENST00000610452 ADCK1Q86TW2 530 aa21.55■■□□□ 1.04
COL15A1-205ENST00000610452 PI4K2BQ8TCG2 481 aa21.55■■□□□ 1.04
COL15A1-205ENST00000610452 PSTPIP2Q9H939 334 aa21.55■■□□□ 1.04
COL15A1-205ENST00000610452 NPHS2Q9NP85 383 aa21.55■■□□□ 1.04
COL15A1-205ENST00000610452 UBN1Q9NPG3 1134 aa21.55■■□□□ 1.04
COL15A1-205ENST00000610452 H3BRJ5 948 aa21.55■■□□□ 1.04
COL15A1-205ENST00000610452 SH2B2O14492 632 aaPredicted RBP21.55■■□□□ 1.04
COL15A1-205ENST00000610452 KCNQ3O43525 872 aa21.55■■□□□ 1.04
COL15A1-205ENST00000610452 HIBADHP31937 336 aaKnown RBP21.55■■□□□ 1.04
COL15A1-205ENST00000610452 TSPY1Q01534 308 aa21.55■■□□□ 1.04
COL15A1-205ENST00000610452 CACNB1Q02641 598 aaPredicted RBP21.55■■□□□ 1.04
COL15A1-205ENST00000610452 TRIM59Q8IWR1 403 aa21.55■■□□□ 1.04
COL15A1-205ENST00000610452 CHP1Q99653 195 aa21.55■■□□□ 1.04
COL15A1-205ENST00000610452 GJB4Q9NTQ9 266 aa21.55■■□□□ 1.04
COL15A1-205ENST00000610452 CARSP49589 748 aaKnown RBP21.55■■□□□ 1.04
COL15A1-205ENST00000610452 SENP1Q9P0U3 644 aa21.55■■□□□ 1.04
COL15A1-205ENST00000610452 PSMD14O00487 310 aa21.54■■□□□ 1.04
COL15A1-205ENST00000610452 PDE8AO60658 829 aa21.54■■□□□ 1.04
COL15A1-205ENST00000610452 MORF4L2Q15014 288 aa21.54■■□□□ 1.04
COL15A1-205ENST00000610452 ZBTB41Q5SVQ8 909 aa21.54■■□□□ 1.04
COL15A1-205ENST00000610452 ODR4Q5SWX8 454 aa21.54■■□□□ 1.04
COL15A1-205ENST00000610452 CCDC137Q6PK04 289 aaKnown RBP21.54■■□□□ 1.04
COL15A1-205ENST00000610452 RBM12Q9NTZ6 932 aaKnown RBP21.54■■□□□ 1.04
COL15A1-205ENST00000610452 PKD2L2Q9NZM6 624 aa21.54■■□□□ 1.04
COL15A1-205ENST00000610452 KCNG1Q9UIX4 513 aa21.54■■□□□ 1.04
COL15A1-205ENST00000610452 MCM8Q9UJA3 840 aa21.54■■□□□ 1.04
COL15A1-205ENST00000610452 SH3TC1Q8TE82 1336 aa21.54■■□□□ 1.04
COL15A1-205ENST00000610452 SLC12A1Q13621 1099 aa21.54■■□□□ 1.04
COL15A1-205ENST00000610452 FAM102BQ5T8I3 360 aa21.54■■□□□ 1.04
COL15A1-205ENST00000610452 A0A1B0GTH6 734 aa21.54■■□□□ 1.04
COL15A1-205ENST00000610452 IQCA1LA6NCM1 817 aa21.54■■□□□ 1.04
COL15A1-205ENST00000610452 ZNF189O75820 626 aaPredicted RBP21.54■■□□□ 1.04
COL15A1-205ENST00000610452 DSG1Q02413 1049 aa21.54■■□□□ 1.04
COL15A1-205ENST00000610452 PAWRQ96IZ0 340 aaKnown RBP21.54■■□□□ 1.04
COL15A1-205ENST00000610452 CACYBPQ9HB71 228 aaKnown RBP21.54■■□□□ 1.04
COL15A1-205ENST00000610452 PRAMEP78395 509 aa21.54■■□□□ 1.04
COL15A1-205ENST00000610452 TRAF7Q6Q0C0 670 aa21.54■■□□□ 1.04
COL15A1-205ENST00000610452 BTNL9Q6UXG8 535 aa21.54■■□□□ 1.04
COL15A1-205ENST00000610452 KRT26Q7Z3Y9 468 aa21.54■■□□□ 1.04
COL15A1-205ENST00000610452 MMGT1Q8N4V1 131 aa21.54■■□□□ 1.04
COL15A1-205ENST00000610452 THTPAQ9BU02 230 aa21.54■■□□□ 1.04
COL15A1-205ENST00000610452 LIMA1Q9UHB6 759 aaKnown RBP21.54■■□□□ 1.04
COL15A1-205ENST00000610452 XPO1O14980 1071 aaKnown RBP21.54■■□□□ 1.04
COL15A1-205ENST00000610452 CFBP00751 764 aa21.54■■□□□ 1.04
COL15A1-205ENST00000610452 PABPC4Q13310 644 aaKnown RBP eCLIP21.54■■□□□ 1.04
COL15A1-205ENST00000610452 STAT4Q14765 748 aa21.54■■□□□ 1.04
COL15A1-205ENST00000610452 RCN1Q15293 331 aa21.54■■□□□ 1.04
COL15A1-205ENST00000610452 TRIM60Q495X7 471 aa21.54■■□□□ 1.04
COL15A1-205ENST00000610452 REXO1L1PQ8IX06 675 aa21.54■■□□□ 1.04
COL15A1-205ENST00000610452 ANKRD27Q96NW4 1050 aa21.54■■□□□ 1.04
COL15A1-205ENST00000610452 RANBP17Q9H2T7 1088 aaKnown RBP21.54■■□□□ 1.04
COL15A1-205ENST00000610452 PCDHB4Q9Y5E5 795 aa21.54■■□□□ 1.04
COL15A1-205ENST00000610452 A6NJR5 290 aa21.53■■□□□ 1.04
COL15A1-205ENST00000610452 ITIH4Q14624 930 aa21.53■■□□□ 1.04
COL15A1-205ENST00000610452 AEBP2Q6ZN18 517 aaPredicted RBP21.53■■□□□ 1.04
COL15A1-205ENST00000610452 ZC3H15Q8WU90 426 aaKnown RBP21.53■■□□□ 1.04
COL15A1-205ENST00000610452 KDM4CQ9H3R0 1056 aa21.53■■□□□ 1.04
COL15A1-205ENST00000610452 TRABDQ9H4I3 376 aa21.53■■□□□ 1.04
COL15A1-205ENST00000610452 DBR1Q9UK59 544 aaKnown RBP21.53■■□□□ 1.04
COL15A1-205ENST00000610452 RPAP1Q9BWH6 1393 aaPredicted RBP21.53■■□□□ 1.04
COL15A1-205ENST00000610452 MYBL1P10243 752 aa21.53■■□□□ 1.04
COL15A1-205ENST00000610452 KCNB1Q14721 858 aa21.53■■□□□ 1.04
COL15A1-205ENST00000610452 PIGOQ8TEQ8 1089 aa21.53■■□□□ 1.04
COL15A1-205ENST00000610452 ARL8AQ96BM9 186 aa21.53■■□□□ 1.04
COL15A1-205ENST00000610452 L3MBTL1Q9Y468 752 aa21.53■■□□□ 1.04
COL15A1-205ENST00000610452 KAT6BQ8WYB5 2073 aa21.53■■□□□ 1.04
COL15A1-205ENST00000610452 SREK1IP1Q8N9Q2 155 aaPredicted RBP21.53■■□□□ 1.04
COL15A1-205ENST00000610452 SNF8Q96H20 258 aa21.53■■□□□ 1.04
COL15A1-205ENST00000610452 SMG5Q9UPR3 1016 aaKnown RBP21.53■■□□□ 1.04
COL15A1-205ENST00000610452 RSPH10B2B2RC85 870 aa21.53■■□□□ 1.04
COL15A1-205ENST00000610452 M0R2C6 588 aa21.53■■□□□ 1.04
COL15A1-205ENST00000610452 RSPH10BP0C881 870 aa21.53■■□□□ 1.04
COL15A1-205ENST00000610452 KIF19Q2TAC6 998 aa21.53■■□□□ 1.04
COL15A1-205ENST00000610452 MDH1BQ5I0G3 518 aa21.53■■□□□ 1.04
COL15A1-205ENST00000610452 FAM83BQ5T0W9 1011 aa21.53■■□□□ 1.04
COL15A1-205ENST00000610452 TMTC4Q5T4D3 741 aa21.53■■□□□ 1.04
COL15A1-205ENST00000610452 ARL6IP4Q66PJ3 421 aaKnown RBP21.53■■□□□ 1.04
COL15A1-205ENST00000610452 TPTE2Q6XPS3 522 aa21.53■■□□□ 1.04
COL15A1-205ENST00000610452 TMCO5AQ8N6Q1 288 aa21.53■■□□□ 1.04
COL15A1-205ENST00000610452 PLXNC1O60486 1568 aa21.52■■□□□ 1.04
COL15A1-205ENST00000610452 LIG4P49917 911 aa21.52■■□□□ 1.04
COL15A1-205ENST00000610452 ALDH18A1P54886 795 aaKnown RBP21.52■■□□□ 1.04
COL15A1-205ENST00000610452 CYP4A11Q02928 519 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms