RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 POLR2MP0CAP2 368 aa10.71□□□□□ -0.69
CTCFL-220ENST00000608858 GBP2P32456 591 aaPredicted RBP10.71□□□□□ -0.69
CTCFL-220ENST00000608858 METAP2P50579 478 aaKnown RBP eCLIP10.71□□□□□ -0.693e-6■□□□□ 9.1
CTCFL-220ENST00000608858 ARHGAP8P85298 464 aa10.71□□□□□ -0.69
CTCFL-220ENST00000608858 KRT76Q01546 638 aa10.71□□□□□ -0.69
CTCFL-220ENST00000608858 MAMSTRQ6ZN01 415 aa10.71□□□□□ -0.69
CTCFL-220ENST00000608858 MFSD6Q6ZSS7 791 aa10.71□□□□□ -0.69
CTCFL-220ENST00000608858 SLC24A5Q71RS6 500 aa10.71□□□□□ -0.69
CTCFL-220ENST00000608858 PKD1L2Q7Z442 2459 aa10.71□□□□□ -0.69
CTCFL-220ENST00000608858 HOMER1Q86YM7 354 aa10.71□□□□□ -0.69
CTCFL-220ENST00000608858 ATRIPQ8WXE1 791 aa10.71□□□□□ -0.69
CTCFL-220ENST00000608858 PIBF1Q8WXW3 757 aa10.71□□□□□ -0.69
CTCFL-220ENST00000608858 ZNF558Q96NG5 402 aa10.71□□□□□ -0.69
CTCFL-220ENST00000608858 CASD1Q96PB1 797 aa10.71□□□□□ -0.69
CTCFL-220ENST00000608858 MAF1Q9H063 256 aa10.71□□□□□ -0.69
CTCFL-220ENST00000608858 KAT14Q9H8E8 782 aa10.71□□□□□ -0.69
CTCFL-220ENST00000608858 PARD6AQ9NPB6 346 aa10.71□□□□□ -0.69
CTCFL-220ENST00000608858 RGS18Q9NS28 235 aa10.71□□□□□ -0.69
CTCFL-220ENST00000608858 SPATA6Q9NWH7 488 aaPredicted RBP10.71□□□□□ -0.69
CTCFL-220ENST00000608858 ST3GAL5Q9UNP4 418 aa10.71□□□□□ -0.69
CTCFL-220ENST00000608858 IGSF9BQ9UPX0 1349 aa10.71□□□□□ -0.69
CTCFL-220ENST00000608858 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.7□□□□□ -0.7
CTCFL-220ENST00000608858 C9IYK1 514 aa10.7□□□□□ -0.7
CTCFL-220ENST00000608858 N4BP1O75113 896 aaKnown RBP10.7□□□□□ -0.7
CTCFL-220ENST00000608858 RPS6KA5O75582 802 aa10.7□□□□□ -0.7
CTCFL-220ENST00000608858 PARP1P09874 1014 aaKnown RBP10.7□□□□□ -0.7
CTCFL-220ENST00000608858 TGM1P22735 817 aa10.7□□□□□ -0.7
CTCFL-220ENST00000608858 SPEM2Q0P670 501 aa10.7□□□□□ -0.7
CTCFL-220ENST00000608858 PLCB4Q15147 1175 aa10.7□□□□□ -0.7
CTCFL-220ENST00000608858 GNPTABQ3T906 1256 aa10.7□□□□□ -0.7
CTCFL-220ENST00000608858 TSSK4Q6SA08 328 aa10.7□□□□□ -0.7
CTCFL-220ENST00000608858 SLC22A17Q8WUG5 538 aa10.7□□□□□ -0.7
CTCFL-220ENST00000608858 SEPT1Q8WYJ6 367 aa10.7□□□□□ -0.7
CTCFL-220ENST00000608858 GPATCH3Q96I76 525 aa10.7□□□□□ -0.7
CTCFL-220ENST00000608858 ZBTB40Q9NUA8 1239 aa10.7□□□□□ -0.7
CTCFL-220ENST00000608858 ERAP1Q9NZ08 941 aa10.7□□□□□ -0.7
CTCFL-220ENST00000608858 MTF2Q9Y483 593 aaPredicted RBP10.7□□□□□ -0.7
CTCFL-220ENST00000608858 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.7□□□□□ -0.7
CTCFL-220ENST00000608858 FASNP49327 2511 aaKnown RBP10.7□□□□□ -0.7
CTCFL-220ENST00000608858 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.69□□□□□ -0.7
CTCFL-220ENST00000608858 FIBPO43427 364 aa10.69□□□□□ -0.7
CTCFL-220ENST00000608858 ZIC2O95409 532 aaPredicted RBP10.69□□□□□ -0.7
CTCFL-220ENST00000608858 SEC24BO95487 1268 aa10.69□□□□□ -0.7
CTCFL-220ENST00000608858 LMNB2Q03252 620 aa10.69□□□□□ -0.7
CTCFL-220ENST00000608858 DMWDQ09019 674 aa10.69□□□□□ -0.7
CTCFL-220ENST00000608858 PTPN14Q15678 1187 aa10.69□□□□□ -0.7
CTCFL-220ENST00000608858 DCLRE1AQ6PJP8 1040 aa10.69□□□□□ -0.7
CTCFL-220ENST00000608858 CCDC149Q6ZUS6 474 aa10.69□□□□□ -0.7
CTCFL-220ENST00000608858 GPR149Q86SP6 731 aa10.69□□□□□ -0.7
CTCFL-220ENST00000608858 VPS52Q8N1B4 723 aa10.69□□□□□ -0.7
CTCFL-220ENST00000608858 GPR161Q8N6U8 529 aaKnown RBP10.69□□□□□ -0.7
CTCFL-220ENST00000608858 OTUD7AQ8TE49 926 aaPredicted RBP10.69□□□□□ -0.7
CTCFL-220ENST00000608858 TMEM40Q8WWA1 233 aa10.69□□□□□ -0.7
CTCFL-220ENST00000608858 SECISBP2LQ93073 1101 aaKnown RBP10.69□□□□□ -0.7
CTCFL-220ENST00000608858 INPP4AQ96PE3 977 aaPredicted RBP10.69□□□□□ -0.7
CTCFL-220ENST00000608858 IGSF9Q9P2J2 1179 aa10.69□□□□□ -0.7
CTCFL-220ENST00000608858 SQORQ9Y6N5 450 aa10.69□□□□□ -0.7
CTCFL-220ENST00000608858 RRN3P2A6NIE6 340 aa10.68□□□□□ -0.7
CTCFL-220ENST00000608858 LAMTOR5O43504 91 aa10.68□□□□□ -0.7
CTCFL-220ENST00000608858 SSBP05455 408 aaKnown RBP eCLIP10.68□□□□□ -0.7
CTCFL-220ENST00000608858 CD72P21854 359 aa10.68□□□□□ -0.7
CTCFL-220ENST00000608858 FAM189BP81408 668 aa10.68□□□□□ -0.7
CTCFL-220ENST00000608858 SNW1Q13573 536 aaKnown RBP10.68□□□□□ -0.7
CTCFL-220ENST00000608858 ALX1Q15699 326 aa10.68□□□□□ -0.7
CTCFL-220ENST00000608858 LETM2Q2VYF4 491 aa10.68□□□□□ -0.7
CTCFL-220ENST00000608858 LONRF3Q496Y0 759 aa10.68□□□□□ -0.7
CTCFL-220ENST00000608858 ASPRV1Q53RT3 343 aa10.68□□□□□ -0.7
CTCFL-220ENST00000608858 DGKHQ86XP1 1220 aa10.68□□□□□ -0.7
CTCFL-220ENST00000608858 TBC1D10CQ8IV04 446 aa10.68□□□□□ -0.7
CTCFL-220ENST00000608858 SLC39A11Q8N1S5 342 aa10.68□□□□□ -0.7
CTCFL-220ENST00000608858 SMARCAD1Q9H4L7 1026 aa10.68□□□□□ -0.7
CTCFL-220ENST00000608858 RNF19AQ9NV58 838 aa10.68□□□□□ -0.7
CTCFL-220ENST00000608858 SMG5Q9UPR3 1016 aaKnown RBP10.68□□□□□ -0.7
CTCFL-220ENST00000608858 PCDHA2Q9Y5H9 948 aa10.68□□□□□ -0.7
CTCFL-220ENST00000608858 FANCMQ8IYD8 2048 aa10.67□□□□□ -0.7
CTCFL-220ENST00000608858 KLRF2D3W0D1 207 aa10.67□□□□□ -0.7
CTCFL-220ENST00000608858 GDF9O60383 454 aa10.67□□□□□ -0.7
CTCFL-220ENST00000608858 NCLP19338 710 aaKnown RBP10.67□□□□□ -0.7
CTCFL-220ENST00000608858 KLRC1P26715 233 aa10.67□□□□□ -0.7
CTCFL-220ENST00000608858 KLRC2P26717 231 aa10.67□□□□□ -0.7
CTCFL-220ENST00000608858 BCAR1P56945 870 aa10.67□□□□□ -0.7
CTCFL-220ENST00000608858 BMS1Q14692 1282 aaKnown RBP10.67□□□□□ -0.7
CTCFL-220ENST00000608858 KIZQ2M2Z5 673 aa10.67□□□□□ -0.7
CTCFL-220ENST00000608858 N4BP2L1Q5TBK1 243 aaPredicted RBP10.67□□□□□ -0.7
CTCFL-220ENST00000608858 TRMT1LQ7Z2T5 733 aaKnown RBP10.67□□□□□ -0.7
CTCFL-220ENST00000608858 ABI1Q8IZP0 508 aa10.67□□□□□ -0.7
CTCFL-220ENST00000608858 FAM227BQ96M60 508 aa10.67□□□□□ -0.7
CTCFL-220ENST00000608858 PIGSQ96S52 555 aa10.67□□□□□ -0.7
CTCFL-220ENST00000608858 MYADMQ96S97 322 aa10.67□□□□□ -0.7
CTCFL-220ENST00000608858 PCYT2Q99447 389 aa10.67□□□□□ -0.7
CTCFL-220ENST00000608858 RPP25Q9BUL9 199 aaKnown RBP10.67□□□□□ -0.7
CTCFL-220ENST00000608858 TMEM117Q9H0C3 514 aa10.67□□□□□ -0.7
CTCFL-220ENST00000608858 ARHGEF3Q9NR81 526 aa10.67□□□□□ -0.7
CTCFL-220ENST00000608858 C1orf112Q9NSG2 853 aa10.67□□□□□ -0.7
CTCFL-220ENST00000608858 DZANK1Q9NVP4 752 aa10.67□□□□□ -0.7
CTCFL-220ENST00000608858 TMEM161AQ9NX61 479 aa10.67□□□□□ -0.7
CTCFL-220ENST00000608858 MAP3K20Q9NYL2 800 aaKnown RBP10.67□□□□□ -0.7
CTCFL-220ENST00000608858 ANGPTL2Q9UKU9 493 aa10.67□□□□□ -0.7
CTCFL-220ENST00000608858 PCDHB8Q9UN66 801 aa10.67□□□□□ -0.7
CTCFL-220ENST00000608858 ASPMQ8IZT6 3477 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms