RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 ZFXP17010 805 aaPredicted RBP13.58□□□□□ -0.24
CTCFL-218ENST00000608440 GNAT2P19087 354 aa13.58□□□□□ -0.24
CTCFL-218ENST00000608440 GALK1P51570 392 aa13.58□□□□□ -0.24
CTCFL-218ENST00000608440 KHDC1Q4VXA5 237 aaKnown RBP13.58□□□□□ -0.24
CTCFL-218ENST00000608440 SPATA24Q86W54 205 aa13.58□□□□□ -0.24
CTCFL-218ENST00000608440 STAG2Q8N3U4 1231 aa13.58□□□□□ -0.24
CTCFL-218ENST00000608440 GDAP1Q8TB36 358 aa13.58□□□□□ -0.24
CTCFL-218ENST00000608440 DTX3LQ8TDB6 740 aa13.58□□□□□ -0.24
CTCFL-218ENST00000608440 OXER1Q8TDS5 423 aa13.58□□□□□ -0.24
CTCFL-218ENST00000608440 NEUROD6Q96NK8 337 aa13.58□□□□□ -0.24
CTCFL-218ENST00000608440 CDCA7Q9BWT1 371 aaPredicted RBP13.58□□□□□ -0.24
CTCFL-218ENST00000608440 PFDN4Q9NQP4 134 aa13.58□□□□□ -0.24
CTCFL-218ENST00000608440 BCL9LQ86UU0 1499 aa13.58□□□□□ -0.24
CTCFL-218ENST00000608440 PAPPAQ13219 1627 aa13.58□□□□□ -0.24
CTCFL-218ENST00000608440 GRM8O00222 908 aa13.58□□□□□ -0.24
CTCFL-218ENST00000608440 EPHB6O15197 1021 aa13.58□□□□□ -0.24
CTCFL-218ENST00000608440 NKRFO15226 690 aaKnown RBP eCLIP13.58□□□□□ -0.24
CTCFL-218ENST00000608440 NDUFB5O43674 189 aa13.58□□□□□ -0.24
CTCFL-218ENST00000608440 LYNP07948 512 aa13.58□□□□□ -0.24
CTCFL-218ENST00000608440 TTLL12Q14166 644 aaPredicted RBP13.58□□□□□ -0.24
CTCFL-218ENST00000608440 MAP7Q14244 749 aa13.58□□□□□ -0.24
CTCFL-218ENST00000608440 CNGA2Q16280 664 aa13.58□□□□□ -0.24
CTCFL-218ENST00000608440 KSR2Q6VAB6 950 aa13.58□□□□□ -0.24
CTCFL-218ENST00000608440 COPS6Q7L5N1 327 aa13.58□□□□□ -0.24
CTCFL-218ENST00000608440 OTUD6AQ7L8S5 288 aa13.58□□□□□ -0.24
CTCFL-218ENST00000608440 FBXL16Q8N461 479 aa13.58□□□□□ -0.24
CTCFL-218ENST00000608440 ANKRD42Q8N9B4 389 aa13.58□□□□□ -0.24
CTCFL-218ENST00000608440 TBC1D16Q8TBP0 767 aa13.58□□□□□ -0.24
CTCFL-218ENST00000608440 LZICQ8WZA0 190 aa13.58□□□□□ -0.24
CTCFL-218ENST00000608440 TUBGCP5Q96RT8 1024 aa13.58□□□□□ -0.24
CTCFL-218ENST00000608440 TBC1D10AQ9BXI6 508 aa13.58□□□□□ -0.24
CTCFL-218ENST00000608440 GOLPH3Q9H4A6 298 aa13.58□□□□□ -0.24
CTCFL-218ENST00000608440 PAG1Q9NWQ8 432 aa13.58□□□□□ -0.24
CTCFL-218ENST00000608440 SPATA31A6Q5VVP1 1343 aa13.57□□□□□ -0.24
CTCFL-218ENST00000608440 GRID2IPA4D2P6 1211 aa13.57□□□□□ -0.24
CTCFL-218ENST00000608440 TTI1O43156 1089 aa13.57□□□□□ -0.24
CTCFL-218ENST00000608440 HPCAP84074 193 aa13.57□□□□□ -0.24
CTCFL-218ENST00000608440 RCN1Q15293 331 aa13.57□□□□□ -0.24
CTCFL-218ENST00000608440 CFAP157Q5JU67 520 aa13.57□□□□□ -0.24
CTCFL-218ENST00000608440 DHTKD1Q96HY7 919 aaPredicted RBP13.57□□□□□ -0.24
CTCFL-218ENST00000608440 ABHD8Q96I13 439 aa13.57□□□□□ -0.24
CTCFL-218ENST00000608440 KLHL14Q9P2G3 628 aa13.57□□□□□ -0.24
CTCFL-218ENST00000608440 CTNNAL1Q9UBT7 734 aa13.57□□□□□ -0.24
CTCFL-218ENST00000608440 DBR1Q9UK59 544 aaKnown RBP13.57□□□□□ -0.24
CTCFL-218ENST00000608440 KAT6BQ8WYB5 2073 aa13.57□□□□□ -0.24
CTCFL-218ENST00000608440 GJB6O95452 261 aa13.57□□□□□ -0.24
CTCFL-218ENST00000608440 DDX58O95786 925 aaKnown RBP13.57□□□□□ -0.24
CTCFL-218ENST00000608440 FGAP02671 866 aa13.57□□□□□ -0.24
CTCFL-218ENST00000608440 MMP1P03956 469 aa13.57□□□□□ -0.24
CTCFL-218ENST00000608440 ADARP55265 1226 aaKnown RBP13.57□□□□□ -0.24
CTCFL-218ENST00000608440 UBAP2Q5T6F2 1119 aaKnown RBP13.57□□□□□ -0.24
CTCFL-218ENST00000608440 CMTR1Q8N1G2 835 aaKnown RBP13.57□□□□□ -0.24
CTCFL-218ENST00000608440 TAF4BQ92750 862 aa13.57□□□□□ -0.24
CTCFL-218ENST00000608440 CENPKQ9BS16 269 aa13.57□□□□□ -0.24
CTCFL-218ENST00000608440 MYLK2Q9H1R3 596 aa13.57□□□□□ -0.24
CTCFL-218ENST00000608440 FAM114A2Q9NRY5 505 aa13.57□□□□□ -0.24
CTCFL-218ENST00000608440 TXLNGQ9NUQ3 528 aa13.57□□□□□ -0.24
CTCFL-218ENST00000608440 CIDEBQ9UHD4 219 aa13.57□□□□□ -0.24
CTCFL-218ENST00000608440 R3HDM2Q9Y2K5 976 aaKnown RBP13.57□□□□□ -0.24
CTCFL-218ENST00000608440 UBR2Q8IWV8 1755 aa13.57□□□□□ -0.24
CTCFL-218ENST00000608440 TMEM247A6NEH6 219 aa13.56□□□□□ -0.24
CTCFL-218ENST00000608440 VCAM1P19320 739 aa13.56□□□□□ -0.24
CTCFL-218ENST00000608440 MTIF2P46199 727 aaKnown RBP13.56□□□□□ -0.24
CTCFL-218ENST00000608440 EIF3BP55884 814 aaKnown RBP13.56□□□□□ -0.24
CTCFL-218ENST00000608440 PHEXP78562 749 aa13.56□□□□□ -0.24
CTCFL-218ENST00000608440 PARP6Q2NL67 630 aa13.56□□□□□ -0.24
CTCFL-218ENST00000608440 TDRD12Q587J7 1177 aaKnown RBP13.56□□□□□ -0.24
CTCFL-218ENST00000608440 ZNF658Q5TYW1 1059 aaPredicted RBP13.56□□□□□ -0.24
CTCFL-218ENST00000608440 INTS8Q75QN2 995 aaKnown RBP13.56□□□□□ -0.24
CTCFL-218ENST00000608440 RRAGAQ7L523 313 aa13.56□□□□□ -0.24
CTCFL-218ENST00000608440 ECHDC2Q86YB7 292 aa13.56□□□□□ -0.24
CTCFL-218ENST00000608440 ERP27Q96DN0 273 aa13.56□□□□□ -0.24
CTCFL-218ENST00000608440 DCLRE1BQ9H816 532 aa13.56□□□□□ -0.24
CTCFL-218ENST00000608440 MYH2Q9UKX2 1941 aa13.56□□□□□ -0.24
CTCFL-218ENST00000608440 GOLGA8AA7E2F4 631 aa13.56□□□□□ -0.24
CTCFL-218ENST00000608440 NBPF26B4DH59 902 aa13.56□□□□□ -0.24
CTCFL-218ENST00000608440 ITGA4P13612 1032 aa13.56□□□□□ -0.24
CTCFL-218ENST00000608440 EEF1GP26641 437 aaKnown RBP13.56□□□□□ -0.24
CTCFL-218ENST00000608440 NEK3P51956 506 aa13.56□□□□□ -0.24
CTCFL-218ENST00000608440 CDK17Q00537 523 aa13.56□□□□□ -0.24
CTCFL-218ENST00000608440 SSRP1Q08945 709 aaKnown RBP13.56□□□□□ -0.24
CTCFL-218ENST00000608440 TMEM53Q6P2H8 277 aa13.56□□□□□ -0.24
CTCFL-218ENST00000608440 RFWD3Q6PCD5 774 aa13.56□□□□□ -0.24
CTCFL-218ENST00000608440 LRP10Q7Z4F1 713 aa13.56□□□□□ -0.24
CTCFL-218ENST00000608440 MARCH10Q8NA82 808 aaPredicted RBP13.56□□□□□ -0.24
CTCFL-218ENST00000608440 EPS8L3Q8TE67 593 aaKnown RBP13.56□□□□□ -0.24
CTCFL-218ENST00000608440 OSBP2Q969R2 916 aa13.56□□□□□ -0.24
CTCFL-218ENST00000608440 SRPK1Q96SB4 655 aaKnown RBP13.56□□□□□ -0.24
CTCFL-218ENST00000608440 CCDC134Q9H6E4 229 aa13.56□□□□□ -0.24
CTCFL-218ENST00000608440 CLIC5Q9NZA1 410 aa13.56□□□□□ -0.24
CTCFL-218ENST00000608440 PLAGL2Q9UPG8 496 aa13.56□□□□□ -0.24
CTCFL-218ENST00000608440 BCL9O00512 1426 aa13.56□□□□□ -0.24
CTCFL-218ENST00000608440 VAV1P15498 845 aa13.55□□□□□ -0.24
CTCFL-218ENST00000608440 APOA5Q6Q788 366 aa13.55□□□□□ -0.24
CTCFL-218ENST00000608440 BARGINQ6ZT62 677 aa13.55□□□□□ -0.24
CTCFL-218ENST00000608440 TRIM51Q9BSJ1 452 aa13.55□□□□□ -0.24
CTCFL-218ENST00000608440 NOC4LQ9BVI4 516 aaKnown RBP13.55□□□□□ -0.24
CTCFL-218ENST00000608440 KIAA1683Q9H0B3 1180 aa13.55□□□□□ -0.24
CTCFL-218ENST00000608440 NLRC4Q9NPP4 1024 aa13.55□□□□□ -0.24
CTCFL-218ENST00000608440 USP21Q9UK80 565 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms