RNA–Protein interactions for RNA: ENST00000608425.5

CTCFL-217, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-217ENST00000608425 SMUG1Q53HV7 270 aa12.87□□□□□ -0.35
CTCFL-217ENST00000608425 FAM133AQ8N9E0 248 aa12.87□□□□□ -0.35
CTCFL-217ENST00000608425 ATP11CQ8NB49 1132 aa12.87□□□□□ -0.35
CTCFL-217ENST00000608425 SCG3Q8WXD2 468 aaKnown RBP12.87□□□□□ -0.35
CTCFL-217ENST00000608425 NCSTNQ92542 709 aa12.87□□□□□ -0.35
CTCFL-217ENST00000608425 GATA6Q92908 595 aa12.87□□□□□ -0.35
CTCFL-217ENST00000608425 AP1M1Q9BXS5 423 aa12.87□□□□□ -0.35
CTCFL-217ENST00000608425 TUT1Q9H6E5 874 aaKnown RBP12.87□□□□□ -0.35
CTCFL-217ENST00000608425 ZNHIT6Q9NWK9 470 aaKnown RBP12.87□□□□□ -0.35
CTCFL-217ENST00000608425 ATP8A1Q9Y2Q0 1164 aa12.87□□□□□ -0.35
CTCFL-217ENST00000608425 TCP11X1B4DZS4 312 aa12.87□□□□□ -0.35
CTCFL-217ENST00000608425 GPAA1O43292 621 aa12.87□□□□□ -0.35
CTCFL-217ENST00000608425 WFS1O76024 890 aa12.87□□□□□ -0.35
CTCFL-217ENST00000608425 NTSR2O95665 410 aa12.87□□□□□ -0.35
CTCFL-217ENST00000608425 OAS1P00973 400 aaKnown RBP12.87□□□□□ -0.35
CTCFL-217ENST00000608425 MLH1P40692 756 aa12.87□□□□□ -0.35
CTCFL-217ENST00000608425 ANTXR2P58335 489 aa12.87□□□□□ -0.35
CTCFL-217ENST00000608425 KIAA0753Q2KHM9 967 aa12.87□□□□□ -0.35
CTCFL-217ENST00000608425 CENPTQ96BT3 561 aa12.87□□□□□ -0.35
CTCFL-217ENST00000608425 LRRC45Q96CN5 670 aa12.87□□□□□ -0.35
CTCFL-217ENST00000608425 NMD3Q96D46 503 aaKnown RBP12.87□□□□□ -0.35
CTCFL-217ENST00000608425 MYL10Q9BUA6 226 aa12.87□□□□□ -0.35
CTCFL-217ENST00000608425 TRIM31Q9BZY9 425 aa12.87□□□□□ -0.35
CTCFL-217ENST00000608425 PUS7LQ9H0K6 701 aaKnown RBP12.87□□□□□ -0.35
CTCFL-217ENST00000608425 PFDN4Q9NQP4 134 aa12.87□□□□□ -0.35
CTCFL-217ENST00000608425 ARHGAP20Q9P2F6 1191 aa12.87□□□□□ -0.35
CTCFL-217ENST00000608425 ZNF652Q9Y2D9 606 aa12.87□□□□□ -0.35
CTCFL-217ENST00000608425 LRCH1Q9Y2L9 728 aa12.87□□□□□ -0.35
CTCFL-217ENST00000608425 MYH6P13533 1939 aa12.87□□□□□ -0.35
CTCFL-217ENST00000608425 FOXO6A8MYZ6 492 aa12.86□□□□□ -0.35
CTCFL-217ENST00000608425 CEP104O60308 925 aa12.86□□□□□ -0.35
CTCFL-217ENST00000608425 AFPP02771 609 aaKnown RBP12.86□□□□□ -0.35
CTCFL-217ENST00000608425 TARSP26639 723 aaKnown RBP12.86□□□□□ -0.35
CTCFL-217ENST00000608425 EPHB2P29323 1055 aa12.86□□□□□ -0.35
CTCFL-217ENST00000608425 SLCO1A2P46721 670 aa12.86□□□□□ -0.35
CTCFL-217ENST00000608425 CCDC152Q4G0S7 254 aa12.86□□□□□ -0.35
CTCFL-217ENST00000608425 CLEC4GQ6UXB4 293 aa12.86□□□□□ -0.35
CTCFL-217ENST00000608425 ZNF507Q8TCN5 953 aa12.86□□□□□ -0.35
CTCFL-217ENST00000608425 ATP8B4Q8TF62 1192 aa12.86□□□□□ -0.35
CTCFL-217ENST00000608425 PHF12Q96QT6 1004 aa12.86□□□□□ -0.35
CTCFL-217ENST00000608425 DPH5Q9H2P9 285 aa12.86□□□□□ -0.35
CTCFL-217ENST00000608425 DENND2DQ9H6A0 471 aaPredicted RBP12.86□□□□□ -0.35
CTCFL-217ENST00000608425 AZI2Q9H6S1 392 aa12.86□□□□□ -0.35
CTCFL-217ENST00000608425 CNOT10Q9H9A5 744 aaKnown RBP12.86□□□□□ -0.35
CTCFL-217ENST00000608425 SUGT1Q9Y2Z0 365 aa12.86□□□□□ -0.35
CTCFL-217ENST00000608425 SH3GLB1Q9Y371 365 aa12.86□□□□□ -0.35
CTCFL-217ENST00000608425 CHD4Q14839 1912 aa12.86□□□□□ -0.35
CTCFL-217ENST00000608425 SPDYE16A6NNV3 312 aaPredicted RBP12.86□□□□□ -0.35
CTCFL-217ENST00000608425 OR6B1O95007 311 aa12.86□□□□□ -0.35
CTCFL-217ENST00000608425 SLC5A1P13866 664 aa12.86□□□□□ -0.35
CTCFL-217ENST00000608425 PHEXP78562 749 aa12.86□□□□□ -0.35
CTCFL-217ENST00000608425 NR5A1Q13285 461 aa12.86□□□□□ -0.35
CTCFL-217ENST00000608425 DIXDC1Q155Q3 683 aa12.86□□□□□ -0.35
CTCFL-217ENST00000608425 RIBC1Q8N443 379 aaPredicted RBP12.86□□□□□ -0.35
CTCFL-217ENST00000608425 NR1H4Q96RI1 486 aaPredicted RBP12.86□□□□□ -0.35
CTCFL-217ENST00000608425 TUBGCP5Q96RT8 1024 aa12.86□□□□□ -0.35
CTCFL-217ENST00000608425 CENPOQ9BU64 300 aa12.86□□□□□ -0.35
CTCFL-217ENST00000608425 GOLPH3Q9H4A6 298 aa12.86□□□□□ -0.35
CTCFL-217ENST00000608425 HAO1Q9UJM8 370 aa12.86□□□□□ -0.35
CTCFL-217ENST00000608425 TMEM247A6NEH6 219 aa12.85□□□□□ -0.35
CTCFL-217ENST00000608425 FGAP02671 866 aa12.85□□□□□ -0.35
CTCFL-217ENST00000608425 EIF4A3P38919 411 aaKnown RBP12.85□□□□□ -0.35
CTCFL-217ENST00000608425 NEK3P51956 506 aa12.85□□□□□ -0.35
CTCFL-217ENST00000608425 EHHADHQ08426 723 aa12.85□□□□□ -0.35
CTCFL-217ENST00000608425 PAK1Q13153 545 aa12.85□□□□□ -0.35
CTCFL-217ENST00000608425 KHDC1Q4VXA5 237 aaKnown RBP12.85□□□□□ -0.35
CTCFL-217ENST00000608425 SNX30Q5VWJ9 437 aa12.85□□□□□ -0.35
CTCFL-217ENST00000608425 TMEM53Q6P2H8 277 aa12.85□□□□□ -0.35
CTCFL-217ENST00000608425 TMC3Q7Z5M5 1100 aa12.85□□□□□ -0.35
CTCFL-217ENST00000608425 C2CD5Q86YS7 1000 aa12.85□□□□□ -0.35
CTCFL-217ENST00000608425 KBTBD2Q8IY47 623 aa12.85□□□□□ -0.35
CTCFL-217ENST00000608425 LENG1Q96BZ8 264 aaPredicted RBP12.85□□□□□ -0.35
CTCFL-217ENST00000608425 DHTKD1Q96HY7 919 aaPredicted RBP12.85□□□□□ -0.35
CTCFL-217ENST00000608425 HAPLN3Q96S86 360 aa12.85□□□□□ -0.35
CTCFL-217ENST00000608425 TTYH3Q9C0H2 523 aa12.85□□□□□ -0.35
CTCFL-217ENST00000608425 DDX47Q9H0S4 455 aaKnown RBP12.85□□□□□ -0.35
CTCFL-217ENST00000608425 NHSQ6T4R5 1651 aa12.85□□□□□ -0.35
CTCFL-217ENST00000608425 COL24A1Q17RW2 1714 aa12.85□□□□□ -0.35
CTCFL-217ENST00000608425 FAM205CA6NFA0 338 aa12.85□□□□□ -0.35
CTCFL-217ENST00000608425 LGALS16A8MUM7 142 aa12.85□□□□□ -0.35
CTCFL-217ENST00000608425 GNAT2P19087 354 aa12.85□□□□□ -0.35
CTCFL-217ENST00000608425 GUCY1A2P33402 732 aa12.85□□□□□ -0.35
CTCFL-217ENST00000608425 MMP13P45452 471 aa12.85□□□□□ -0.35
CTCFL-217ENST00000608425 CMPK2Q5EBM0 449 aa12.85□□□□□ -0.35
CTCFL-217ENST00000608425 RFWD3Q6PCD5 774 aa12.85□□□□□ -0.35
CTCFL-217ENST00000608425 C16orf87Q6PH81 154 aa12.85□□□□□ -0.35
CTCFL-217ENST00000608425 ZNF554Q86TJ5 538 aa12.85□□□□□ -0.35
CTCFL-217ENST00000608425 SESTD1Q86VW0 696 aa12.85□□□□□ -0.35
CTCFL-217ENST00000608425 DTX3LQ8TDB6 740 aa12.85□□□□□ -0.35
CTCFL-217ENST00000608425 MPP4Q96JB8 637 aa12.85□□□□□ -0.35
CTCFL-217ENST00000608425 SIKE1Q9BRV8 207 aa12.85□□□□□ -0.35
CTCFL-217ENST00000608425 UBAP1Q9NZ09 502 aa12.85□□□□□ -0.35
CTCFL-217ENST00000608425 TIAM2Q8IVF5 1701 aa12.85□□□□□ -0.35
CTCFL-217ENST00000608425 BCL9LQ86UU0 1499 aa12.85□□□□□ -0.35
CTCFL-217ENST00000608425 THSD7AQ9UPZ6 1657 aa12.85□□□□□ -0.35
CTCFL-217ENST00000608425 EPHB6O15197 1021 aa12.85□□□□□ -0.35
CTCFL-217ENST00000608425 CREB1P16220 341 aa12.85□□□□□ -0.35
CTCFL-217ENST00000608425 SERPINB3P29508 390 aa12.85□□□□□ -0.35
CTCFL-217ENST00000608425 PHKA1P46020 1223 aa12.85□□□□□ -0.35
CTCFL-217ENST00000608425 KIF11P52732 1056 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms