RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 DDX39AO00148 427 aaKnown RBP11.78□□□□□ -0.52
LINC01001-203ENST00000607448 MEIS1O00470 390 aa11.78□□□□□ -0.52
LINC01001-203ENST00000607448 BMP15O95972 392 aa11.78□□□□□ -0.52
LINC01001-203ENST00000607448 ADAM17P78536 824 aa11.78□□□□□ -0.52
LINC01001-203ENST00000607448 TMCO2Q7Z6W1 182 aaPredicted RBP11.78□□□□□ -0.52
LINC01001-203ENST00000607448 DIS3L2Q8IYB7 885 aaKnown RBP11.78□□□□□ -0.52
LINC01001-203ENST00000607448 REXO1Q8N1G1 1221 aaKnown RBP11.78□□□□□ -0.52
LINC01001-203ENST00000607448 GIMAP8Q8ND71 665 aaPredicted RBP11.78□□□□□ -0.52
LINC01001-203ENST00000607448 LMBR1Q8WVP7 490 aa11.78□□□□□ -0.52
LINC01001-203ENST00000607448 ATP6V0A1Q93050 837 aa11.78□□□□□ -0.52
LINC01001-203ENST00000607448 CCDC34Q96HJ3 373 aa11.78□□□□□ -0.52
LINC01001-203ENST00000607448 XPO4Q9C0E2 1151 aaKnown RBP11.78□□□□□ -0.52
LINC01001-203ENST00000607448 C6orf50Q9HD87 102 aa11.78□□□□□ -0.52
LINC01001-203ENST00000607448 JPH1Q9HDC5 661 aaPredicted RBP11.78□□□□□ -0.52
LINC01001-203ENST00000607448 SLC9A2Q9UBY0 812 aa11.78□□□□□ -0.52
LINC01001-203ENST00000607448 KCNH3Q9ULD8 1083 aa11.78□□□□□ -0.52
LINC01001-203ENST00000607448 MAFGO15525 162 aa11.77□□□□□ -0.53
LINC01001-203ENST00000607448 CCNE2O96020 404 aa11.77□□□□□ -0.53
LINC01001-203ENST00000607448 PFKMP08237 780 aa11.77□□□□□ -0.53
LINC01001-203ENST00000607448 SFPQP23246 707 aaKnown RBP eCLIP11.77□□□□□ -0.53
LINC01001-203ENST00000607448 RFC2P35250 354 aa11.77□□□□□ -0.53
LINC01001-203ENST00000607448 FANCCQ00597 558 aa11.77□□□□□ -0.53
LINC01001-203ENST00000607448 AKAP17AQ02040 695 aaKnown RBP11.77□□□□□ -0.53
LINC01001-203ENST00000607448 GRIN2CQ14957 1233 aa11.77□□□□□ -0.53
LINC01001-203ENST00000607448 NPY5RQ15761 445 aa11.77□□□□□ -0.53
LINC01001-203ENST00000607448 CT47A1Q5JQC4 288 aaPredicted RBP11.77□□□□□ -0.53
LINC01001-203ENST00000607448 CCAR2Q8N163 923 aaKnown RBP11.77□□□□□ -0.53
LINC01001-203ENST00000607448 CCDC155Q8N6L0 562 aa11.77□□□□□ -0.53
LINC01001-203ENST00000607448 TRIML1Q8N9V2 468 aa11.77□□□□□ -0.53
LINC01001-203ENST00000607448 CNNM3Q8NE01 707 aa11.77□□□□□ -0.53
LINC01001-203ENST00000607448 MYLIPQ8WY64 445 aa11.77□□□□□ -0.53
LINC01001-203ENST00000607448 SEPT1Q8WYJ6 367 aa11.77□□□□□ -0.53
LINC01001-203ENST00000607448 ERCC4Q92889 916 aaPredicted RBP11.77□□□□□ -0.53
LINC01001-203ENST00000607448 TIFAQ96CG3 184 aa11.77□□□□□ -0.53
LINC01001-203ENST00000607448 GLT8D2Q9H1C3 349 aa11.77□□□□□ -0.53
LINC01001-203ENST00000607448 ZNF215Q9UL58 517 aaPredicted RBP11.77□□□□□ -0.53
LINC01001-203ENST00000607448 STXBP5LQ9Y2K9 1186 aa11.77□□□□□ -0.53
LINC01001-203ENST00000607448 A0A0C4DFX4 3053 aa11.77□□□□□ -0.53
LINC01001-203ENST00000607448 MYO9BQ13459 2157 aa11.76□□□□□ -0.53
LINC01001-203ENST00000607448 NFASCO94856 1347 aa11.76□□□□□ -0.53
LINC01001-203ENST00000607448 EMSYQ7Z589 1322 aa11.76□□□□□ -0.53
LINC01001-203ENST00000607448 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.76□□□□□ -0.53
LINC01001-203ENST00000607448 BIN1O00499 593 aa11.76□□□□□ -0.53
LINC01001-203ENST00000607448 DHX15O43143 795 aaKnown RBP11.76□□□□□ -0.53
LINC01001-203ENST00000607448 CXCL10P02778 98 aa11.76□□□□□ -0.53
LINC01001-203ENST00000607448 CYP3A4P08684 503 aa11.76□□□□□ -0.53
LINC01001-203ENST00000607448 CTSHP09668 335 aa11.76□□□□□ -0.53
LINC01001-203ENST00000607448 GNA11P29992 359 aa11.76□□□□□ -0.53
LINC01001-203ENST00000607448 ZNF76P36508 570 aa11.76□□□□□ -0.53
LINC01001-203ENST00000607448 THPOP40225 353 aa11.76□□□□□ -0.53
LINC01001-203ENST00000607448 ACTR2P61160 394 aa11.76□□□□□ -0.53
LINC01001-203ENST00000607448 RUFY4Q6ZNE9 571 aa11.76□□□□□ -0.53
LINC01001-203ENST00000607448 TMC6Q7Z403 805 aa11.76□□□□□ -0.53
LINC01001-203ENST00000607448 TEX2Q8IWB9 1127 aa11.76□□□□□ -0.53
LINC01001-203ENST00000607448 CCDC12Q8WUD4 166 aaPredicted RBP11.76□□□□□ -0.53
LINC01001-203ENST00000607448 LENG9Q96B70 501 aa11.76□□□□□ -0.53
LINC01001-203ENST00000607448 NKX2-4Q9H2Z4 354 aa11.76□□□□□ -0.53
LINC01001-203ENST00000607448 ZNF576Q9H609 170 aa11.76□□□□□ -0.53
LINC01001-203ENST00000607448 FBXO2Q9UK22 296 aaPredicted RBP11.76□□□□□ -0.53
LINC01001-203ENST00000607448 SLC4A7Q9Y6M7 1214 aa11.76□□□□□ -0.53
LINC01001-203ENST00000607448 A0A087WWV3 80 aa11.75□□□□□ -0.53
LINC01001-203ENST00000607448 M0R2N6 131 aa11.75□□□□□ -0.53
LINC01001-203ENST00000607448 LGR5O75473 907 aa11.75□□□□□ -0.53
LINC01001-203ENST00000607448 ARHGEF15O94989 841 aa11.75□□□□□ -0.53
LINC01001-203ENST00000607448 ATP2A2P16615 1042 aaKnown RBP11.75□□□□□ -0.53
LINC01001-203ENST00000607448 DEFB103AP81534 67 aa11.75□□□□□ -0.53
LINC01001-203ENST00000607448 MARCH8Q5T0T0 291 aa11.75□□□□□ -0.53
LINC01001-203ENST00000607448 PDCL2Q8N4E4 241 aa11.75□□□□□ -0.53
LINC01001-203ENST00000607448 MLKLQ8NB16 471 aa11.75□□□□□ -0.53
LINC01001-203ENST00000607448 CCDC148Q8NFR7 591 aa11.75□□□□□ -0.53
LINC01001-203ENST00000607448 KIF18AQ8NI77 898 aa11.75□□□□□ -0.53
LINC01001-203ENST00000607448 GLG1Q92896 1179 aa11.75□□□□□ -0.53
LINC01001-203ENST00000607448 GJA10Q969M2 543 aa11.75□□□□□ -0.53
LINC01001-203ENST00000607448 MTIF3Q9H2K0 278 aaKnown RBP11.75□□□□□ -0.53
LINC01001-203ENST00000607448 SH3GLB2Q9NR46 395 aa11.75□□□□□ -0.53
LINC01001-203ENST00000607448 ERAP1Q9NZ08 941 aa11.75□□□□□ -0.53
LINC01001-203ENST00000607448 KCNJ14Q9UNX9 436 aa11.75□□□□□ -0.53
LINC01001-203ENST00000607448 SRPRBQ9Y5M8 271 aaKnown RBP11.75□□□□□ -0.53
LINC01001-203ENST00000607448 NLRC5Q86WI3 1866 aa11.75□□□□□ -0.53
LINC01001-203ENST00000607448 RSPH10B2B2RC85 870 aa11.75□□□□□ -0.53
LINC01001-203ENST00000607448 BTBD18B2RXH4 712 aa11.75□□□□□ -0.53
LINC01001-203ENST00000607448 ATG7O95352 703 aa11.75□□□□□ -0.53
LINC01001-203ENST00000607448 RSPH10BP0C881 870 aa11.75□□□□□ -0.53
LINC01001-203ENST00000607448 NLRP5P59047 1200 aa11.75□□□□□ -0.53
LINC01001-203ENST00000607448 WDR5P61964 334 aaKnown RBP11.75□□□□□ -0.53
LINC01001-203ENST00000607448 IGBP1P78318 339 aa11.75□□□□□ -0.53
LINC01001-203ENST00000607448 PNOCQ13519 176 aa11.75□□□□□ -0.53
LINC01001-203ENST00000607448 ARID5BQ14865 1188 aa11.75□□□□□ -0.53
LINC01001-203ENST00000607448 GRIK4Q16099 956 aa11.75□□□□□ -0.53
LINC01001-203ENST00000607448 PRR16Q569H4 304 aa11.75□□□□□ -0.53
LINC01001-203ENST00000607448 NT5DC1Q5TFE4 455 aa11.75□□□□□ -0.53
LINC01001-203ENST00000607448 NIPA1Q7RTP0 329 aa11.75□□□□□ -0.53
LINC01001-203ENST00000607448 SPRED2Q7Z698 418 aa11.75□□□□□ -0.53
LINC01001-203ENST00000607448 CCDC60Q8IWA6 550 aaPredicted RBP11.75□□□□□ -0.53
LINC01001-203ENST00000607448 TRAPPC12Q8WVT3 735 aa11.75□□□□□ -0.53
LINC01001-203ENST00000607448 CLIC6Q96NY7 704 aa11.75□□□□□ -0.53
LINC01001-203ENST00000607448 CGNQ9P2M7 1197 aaKnown RBP11.75□□□□□ -0.53
LINC01001-203ENST00000607448 NRCAMQ92823 1304 aa11.74□□□□□ -0.53
LINC01001-203ENST00000607448 TMEM265A0A087WTH1 108 aa11.74□□□□□ -0.53
LINC01001-203ENST00000607448 IGKV6D-21A0A0A0MT36 114 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms