RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 ZSCAN20P17040 1043 aaPredicted RBP16.83■□□□□ 0.28
CTSA-216ENST00000607212 TMOD1P28289 359 aa16.83■□□□□ 0.28
CTSA-216ENST00000607212 CLCN3P51790 818 aa16.83■□□□□ 0.28
CTSA-216ENST00000607212 UBE3AQ05086 875 aa16.83■□□□□ 0.28
CTSA-216ENST00000607212 PLPP4Q5VZY2 271 aa16.83■□□□□ 0.28
CTSA-216ENST00000607212 ZNF746Q6NUN9 644 aaPredicted RBP16.83■□□□□ 0.28
CTSA-216ENST00000607212 FAM228AQ86W67 206 aa16.83■□□□□ 0.28
CTSA-216ENST00000607212 SMAP1Q8IYB5 467 aaPredicted RBP16.83■□□□□ 0.28
CTSA-216ENST00000607212 COLGALT1Q8NBJ5 622 aa16.83■□□□□ 0.28
CTSA-216ENST00000607212 BRF1Q92994 677 aa16.83■□□□□ 0.28
CTSA-216ENST00000607212 FAM167AQ96KS9 214 aa16.83■□□□□ 0.28
CTSA-216ENST00000607212 ENTPD7Q9NQZ7 604 aa16.83■□□□□ 0.28
CTSA-216ENST00000607212 FAM217BQ9NTX9 383 aaPredicted RBP16.83■□□□□ 0.28
CTSA-216ENST00000607212 TYW1Q9NV66 732 aaKnown RBP16.83■□□□□ 0.28
CTSA-216ENST00000607212 PCDHA10Q9Y5I2 948 aa16.83■□□□□ 0.28
CTSA-216ENST00000607212 IGLV3-22A0A075B6J6 115 aa16.82■□□□□ 0.28
CTSA-216ENST00000607212 MAGEB2O15479 319 aa16.82■□□□□ 0.28
CTSA-216ENST00000607212 CHMP2AO43633 222 aa16.82■□□□□ 0.28
CTSA-216ENST00000607212 C22orf31O95567 290 aa16.82■□□□□ 0.28
CTSA-216ENST00000607212 CYP3A4P08684 503 aa16.82■□□□□ 0.28
CTSA-216ENST00000607212 LAG3P18627 525 aa16.82■□□□□ 0.28
CTSA-216ENST00000607212 RCAN1P53805 252 aa16.82■□□□□ 0.28
CTSA-216ENST00000607212 EFCAB12Q6NXP0 572 aa16.82■□□□□ 0.28
CTSA-216ENST00000607212 BLOC1S2Q6QNY1 142 aa16.82■□□□□ 0.28
CTSA-216ENST00000607212 HFE2Q6ZVN8 426 aa16.82■□□□□ 0.28
CTSA-216ENST00000607212 CENPQQ7L2Z9 268 aaPredicted RBP16.82■□□□□ 0.28
CTSA-216ENST00000607212 CRIPAKQ8N1N5 446 aa16.82■□□□□ 0.28
CTSA-216ENST00000607212 CCDC148Q8NFR7 591 aa16.82■□□□□ 0.28
CTSA-216ENST00000607212 BICD2Q8TD16 824 aa16.82■□□□□ 0.28
CTSA-216ENST00000607212 RASGRP4Q8TDF6 673 aa16.82■□□□□ 0.28
CTSA-216ENST00000607212 PHKBQ93100 1093 aa16.82■□□□□ 0.28
CTSA-216ENST00000607212 ZNF668Q96K58 619 aaPredicted RBP16.82■□□□□ 0.28
CTSA-216ENST00000607212 MSLNLQ96KJ4 702 aa16.82■□□□□ 0.28
CTSA-216ENST00000607212 RPGRIP1Q96KN7 1286 aa16.82■□□□□ 0.28
CTSA-216ENST00000607212 TMEM161AQ9NX61 479 aa16.82■□□□□ 0.28
CTSA-216ENST00000607212 CLEC1BQ9P126 229 aa16.82■□□□□ 0.28
CTSA-216ENST00000607212 HCSTQ9UBK5 93 aa16.82■□□□□ 0.28
CTSA-216ENST00000607212 PUF60Q9UHX1 559 aaKnown RBP16.82■□□□□ 0.28
CTSA-216ENST00000607212 USP15Q9Y4E8 981 aaPredicted RBP16.82■□□□□ 0.28
CTSA-216ENST00000607212 WDR81Q562E7 1941 aa16.81■□□□□ 0.28
CTSA-216ENST00000607212 ESYT2A0FGR8 921 aa16.81■□□□□ 0.28
CTSA-216ENST00000607212 WDR64B1ANS9 1081 aa16.81■□□□□ 0.28
CTSA-216ENST00000607212 C9IYK1 514 aa16.81■□□□□ 0.28
CTSA-216ENST00000607212 DHX15O43143 795 aaKnown RBP16.81■□□□□ 0.28
CTSA-216ENST00000607212 HOXA2O43364 376 aa16.81■□□□□ 0.28
CTSA-216ENST00000607212 ATP4AP20648 1035 aa16.81■□□□□ 0.28
CTSA-216ENST00000607212 NLRP11P59045 1033 aaKnown RBP16.81■□□□□ 0.28
CTSA-216ENST00000607212 COASYQ13057 564 aa16.81■□□□□ 0.28
CTSA-216ENST00000607212 TSGA10IPQ3SY00 556 aa16.81■□□□□ 0.28
CTSA-216ENST00000607212 HERC4Q5GLZ8 1057 aaPredicted RBP16.81■□□□□ 0.28
CTSA-216ENST00000607212 LLGL2Q6P1M3 1020 aa16.81■□□□□ 0.28
CTSA-216ENST00000607212 FAM43BQ6ZT52 329 aaPredicted RBP16.81■□□□□ 0.28
CTSA-216ENST00000607212 LRRC71Q8N4P6 559 aa16.81■□□□□ 0.28
CTSA-216ENST00000607212 SMRP1Q8NCR6 262 aa16.81■□□□□ 0.28
CTSA-216ENST00000607212 SLC26A6Q9BXS9 759 aa16.81■□□□□ 0.28
CTSA-216ENST00000607212 ZMYND12Q9H0C1 365 aa16.81■□□□□ 0.28
CTSA-216ENST00000607212 NRBP2Q9NSY0 501 aa16.81■□□□□ 0.28
CTSA-216ENST00000607212 MAFBQ9Y5Q3 323 aaPredicted RBP16.81■□□□□ 0.28
CTSA-216ENST00000607212 MUC6Q6W4X9 2439 aa16.8■□□□□ 0.28
CTSA-216ENST00000607212 FSD2A1L4K1 749 aa16.8■□□□□ 0.28
CTSA-216ENST00000607212 ZBTB42B2RXF5 422 aa16.8■□□□□ 0.28
CTSA-216ENST00000607212 PRPF3O43395 683 aaKnown RBP16.8■□□□□ 0.28
CTSA-216ENST00000607212 EYA4O95677 639 aa16.8■□□□□ 0.28
CTSA-216ENST00000607212 ZBTB33Q86T24 672 aa16.8■□□□□ 0.28
CTSA-216ENST00000607212 FBXL18Q96ME1 805 aa16.8■□□□□ 0.28
CTSA-216ENST00000607212 CDCA3Q99618 268 aaPredicted RBP16.8■□□□□ 0.28
CTSA-216ENST00000607212 TCF25Q9BQ70 676 aa16.8■□□□□ 0.28
CTSA-216ENST00000607212 APOL5Q9BWW9 433 aa16.8■□□□□ 0.28
CTSA-216ENST00000607212 TMEM117Q9H0C3 514 aa16.8■□□□□ 0.28
CTSA-216ENST00000607212 GAS7O60861 476 aa16.79■□□□□ 0.28
CTSA-216ENST00000607212 GPR32O75388 356 aa16.79■□□□□ 0.28
CTSA-216ENST00000607212 GLP2RO95838 553 aa16.79■□□□□ 0.28
CTSA-216ENST00000607212 OATP04181 439 aa16.79■□□□□ 0.28
CTSA-216ENST00000607212 TECP42680 631 aa16.79■□□□□ 0.28
CTSA-216ENST00000607212 NLRP5P59047 1200 aa16.79■□□□□ 0.28
CTSA-216ENST00000607212 ERVFC1P60507 584 aa16.79■□□□□ 0.28
CTSA-216ENST00000607212 RBM10P98175 930 aaKnown RBP16.79■□□□□ 0.28
CTSA-216ENST00000607212 KRT17Q04695 432 aa16.79■□□□□ 0.28
CTSA-216ENST00000607212 PDE12Q6L8Q7 609 aaKnown RBP16.79■□□□□ 0.28
CTSA-216ENST00000607212 SUGP1Q8IWZ8 645 aaKnown RBP16.79■□□□□ 0.28
CTSA-216ENST00000607212 LRRC43Q8N309 656 aa16.79■□□□□ 0.28
CTSA-216ENST00000607212 NLRP7Q8WX94 980 aa16.79■□□□□ 0.28
CTSA-216ENST00000607212 EDAQ92838 391 aa16.79■□□□□ 0.28
CTSA-216ENST00000607212 PBXIP1Q96AQ6 731 aa16.79■□□□□ 0.28
CTSA-216ENST00000607212 ZNF558Q96NG5 402 aa16.79■□□□□ 0.28
CTSA-216ENST00000607212 PHF7Q9BWX1 381 aaPredicted RBP16.79■□□□□ 0.28
CTSA-216ENST00000607212 TEKT3Q9BXF9 490 aa16.79■□□□□ 0.28
CTSA-216ENST00000607212 ELAC1Q9H777 363 aaKnown RBP16.79■□□□□ 0.28
CTSA-216ENST00000607212 DISC1Q9NRI5 854 aa16.79■□□□□ 0.28
CTSA-216ENST00000607212 VPS54Q9P1Q0 977 aa16.79■□□□□ 0.28
CTSA-216ENST00000607212 TMEM221A6NGB7 291 aa16.78■□□□□ 0.28
CTSA-216ENST00000607212 M0R296 226 aa16.78■□□□□ 0.28
CTSA-216ENST00000607212 ADAMTS3O15072 1205 aa16.78■□□□□ 0.28
CTSA-216ENST00000607212 SP100P23497 879 aaPredicted RBP16.78■□□□□ 0.28
CTSA-216ENST00000607212 CCT2P78371 535 aaKnown RBP16.78■□□□□ 0.28
CTSA-216ENST00000607212 PRKCEQ02156 737 aa16.78■□□□□ 0.28
CTSA-216ENST00000607212 NHLH1Q02575 133 aa16.78■□□□□ 0.28
CTSA-216ENST00000607212 TBC1D8BQ0IIM8 1120 aa16.78■□□□□ 0.28
CTSA-216ENST00000607212 DUSP6Q16828 381 aa16.78■□□□□ 0.28
CTSA-216ENST00000607212 TMC7Q7Z402 723 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms