RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 ARSHQ5FYA8 562 aa8.55□□□□□ -1.04
MSH6-211ENST00000606499 NFRKBQ6P4R8 1299 aa8.55□□□□□ -1.04
MSH6-211ENST00000606499 PADI6Q6TGC4 694 aa8.55□□□□□ -1.04
MSH6-211ENST00000606499 RUFY4Q6ZNE9 571 aa8.55□□□□□ -1.04
MSH6-211ENST00000606499 KRBA2Q6ZNG9 492 aa8.55□□□□□ -1.04
MSH6-211ENST00000606499 NECAB2Q7Z6G3 386 aa8.55□□□□□ -1.04
MSH6-211ENST00000606499 UBE2Q1Q7Z7E8 422 aa8.55□□□□□ -1.04
MSH6-211ENST00000606499 SESTD1Q86VW0 696 aa8.55□□□□□ -1.04
MSH6-211ENST00000606499 CEP57L1Q8IYX8 460 aa8.55□□□□□ -1.04
MSH6-211ENST00000606499 LRRC71Q8N4P6 559 aa8.55□□□□□ -1.04
MSH6-211ENST00000606499 KCTD17Q8N5Z5 321 aa8.55□□□□□ -1.04
MSH6-211ENST00000606499 SYT2Q8N9I0 419 aaPredicted RBP8.55□□□□□ -1.04
MSH6-211ENST00000606499 SLC43A3Q8NBI5 491 aa8.55□□□□□ -1.04
MSH6-211ENST00000606499 CNNM3Q8NE01 707 aa8.55□□□□□ -1.04
MSH6-211ENST00000606499 CTAGE1Q96RT6 745 aa8.55□□□□□ -1.04
MSH6-211ENST00000606499 MTRQ99707 1265 aa8.55□□□□□ -1.04
MSH6-211ENST00000606499 PYM1Q9BRP8 204 aaKnown RBP8.55□□□□□ -1.04
MSH6-211ENST00000606499 TRPV6Q9H1D0 765 aa8.55□□□□□ -1.04
MSH6-211ENST00000606499 CUEDC2Q9H467 287 aa8.55□□□□□ -1.04
MSH6-211ENST00000606499 POLD4Q9HCU8 107 aa8.55□□□□□ -1.04
MSH6-211ENST00000606499 XPNPEP1Q9NQW7 623 aa8.55□□□□□ -1.04
MSH6-211ENST00000606499 TRMT13Q9NUP7 481 aaKnown RBP8.55□□□□□ -1.04
MSH6-211ENST00000606499 MBLAC1A4D2B0 266 aaPredicted RBP8.54□□□□□ -1.04
MSH6-211ENST00000606499 MYMKA6NI61 221 aa8.54□□□□□ -1.04
MSH6-211ENST00000606499 RRN3P2A6NIE6 340 aa8.54□□□□□ -1.04
MSH6-211ENST00000606499 RSPH10B2B2RC85 870 aa8.54□□□□□ -1.04
MSH6-211ENST00000606499 ARVCFO00192 962 aa8.54□□□□□ -1.04
MSH6-211ENST00000606499 B4GALT4O60513 344 aa8.54□□□□□ -1.04
MSH6-211ENST00000606499 PQBP1O60828 265 aaKnown RBP8.54□□□□□ -1.04
MSH6-211ENST00000606499 KINO60870 393 aaKnown RBP8.54□□□□□ -1.04
MSH6-211ENST00000606499 MAFO75444 373 aaPredicted RBP8.54□□□□□ -1.04
MSH6-211ENST00000606499 RSPH10BP0C881 870 aa8.54□□□□□ -1.04
MSH6-211ENST00000606499 CYP2C9P11712 490 aa8.54□□□□□ -1.04
MSH6-211ENST00000606499 CYP11B2P19099 503 aa8.54□□□□□ -1.04
MSH6-211ENST00000606499 RFC5P40937 340 aa8.54□□□□□ -1.04
MSH6-211ENST00000606499 CDK7P50613 346 aa8.54□□□□□ -1.04
MSH6-211ENST00000606499 CLCN3P51790 818 aa8.54□□□□□ -1.04
MSH6-211ENST00000606499 PTPN11Q06124 597 aaPredicted RBP8.54□□□□□ -1.04
MSH6-211ENST00000606499 MKRN4PQ13434 485 aaPredicted RBP8.54□□□□□ -1.04
MSH6-211ENST00000606499 DRP2Q13474 957 aa8.54□□□□□ -1.04
MSH6-211ENST00000606499 NFKBIBQ15653 356 aa8.54□□□□□ -1.04
MSH6-211ENST00000606499 PTGISQ16647 500 aa8.54□□□□□ -1.04
MSH6-211ENST00000606499 LRRC26Q2I0M4 334 aa8.54□□□□□ -1.04
MSH6-211ENST00000606499 TRIM60Q495X7 471 aa8.54□□□□□ -1.04
MSH6-211ENST00000606499 RINT1Q6NUQ1 792 aa8.54□□□□□ -1.04
MSH6-211ENST00000606499 MTHFD1LQ6UB35 978 aa8.54□□□□□ -1.04
MSH6-211ENST00000606499 SLC39A5Q6ZMH5 540 aa8.54□□□□□ -1.04
MSH6-211ENST00000606499 C1orf186Q6ZWK4 172 aa8.54□□□□□ -1.04
MSH6-211ENST00000606499 SV2BQ7L1I2 683 aa8.54□□□□□ -1.04
MSH6-211ENST00000606499 MAEAQ7L5Y9 396 aa8.54□□□□□ -1.04
MSH6-211ENST00000606499 DYMQ7RTS9 669 aa8.54□□□□□ -1.04
MSH6-211ENST00000606499 SLC7A3Q8WY07 619 aa8.54□□□□□ -1.04
MSH6-211ENST00000606499 WNT8BQ93098 351 aa8.54□□□□□ -1.04
MSH6-211ENST00000606499 PAGE5Q96GU1 130 aa8.54□□□□□ -1.04
MSH6-211ENST00000606499 REEP2Q9BRK0 252 aa8.54□□□□□ -1.04
MSH6-211ENST00000606499 BLZF1Q9H2G9 400 aa8.54□□□□□ -1.04
MSH6-211ENST00000606499 TNMDQ9H2S6 317 aa8.54□□□□□ -1.04
MSH6-211ENST00000606499 DHX33Q9H6R0 707 aaKnown RBP8.54□□□□□ -1.04
MSH6-211ENST00000606499 MAGEF1Q9HAY2 307 aa8.54□□□□□ -1.04
MSH6-211ENST00000606499 ATP6V0A4Q9HBG4 840 aa8.54□□□□□ -1.04
MSH6-211ENST00000606499 GPRC5CQ9NQ84 441 aa8.54□□□□□ -1.04
MSH6-211ENST00000606499 PDLIM7Q9NR12 457 aa8.54□□□□□ -1.04
MSH6-211ENST00000606499 KBTBD4Q9NVX7 518 aa8.54□□□□□ -1.04
MSH6-211ENST00000606499 USP25Q9UHP3 1055 aa8.54□□□□□ -1.04
MSH6-211ENST00000606499 KIAA0100Q14667 2235 aaKnown RBP8.54□□□□□ -1.04
MSH6-211ENST00000606499 LTBP2Q14767 1821 aa8.53□□□□□ -1.04
MSH6-211ENST00000606499 IGKV6-21A0A0C4DH24 114 aa8.53□□□□□ -1.04
MSH6-211ENST00000606499 HIP1RO75146 1068 aa8.53□□□□□ -1.04
MSH6-211ENST00000606499 DGAT1O75907 488 aa8.53□□□□□ -1.04
MSH6-211ENST00000606499 MBD3O95983 291 aa8.53□□□□□ -1.04
MSH6-211ENST00000606499 KRT18P05783 430 aaKnown RBP8.53□□□□□ -1.04
MSH6-211ENST00000606499 GNAT1P11488 350 aa8.53□□□□□ -1.04
MSH6-211ENST00000606499 CAPN2P17655 700 aa8.53□□□□□ -1.04
MSH6-211ENST00000606499 GUCY2CP25092 1073 aa8.53□□□□□ -1.04
MSH6-211ENST00000606499 RTP1P59025 263 aa8.53□□□□□ -1.04
MSH6-211ENST00000606499 MAPK7Q13164 816 aa8.53□□□□□ -1.04
MSH6-211ENST00000606499 PNOCQ13519 176 aa8.53□□□□□ -1.04
MSH6-211ENST00000606499 CUL4BQ13620 913 aa8.53□□□□□ -1.04
MSH6-211ENST00000606499 SNX17Q15036 470 aa8.53□□□□□ -1.04
MSH6-211ENST00000606499 FAM102BQ5T8I3 360 aa8.53□□□□□ -1.04
MSH6-211ENST00000606499 EFCAB12Q6NXP0 572 aa8.53□□□□□ -1.04
MSH6-211ENST00000606499 SH3RF1Q7Z6J0 888 aa8.53□□□□□ -1.04
MSH6-211ENST00000606499 SERINC5Q86VE9 423 aa8.53□□□□□ -1.04
MSH6-211ENST00000606499 FAM126BQ8IXS8 530 aa8.53□□□□□ -1.04
MSH6-211ENST00000606499 DAW1Q8N136 415 aa8.53□□□□□ -1.04
MSH6-211ENST00000606499 METTL13Q8N6R0 699 aa8.53□□□□□ -1.04
MSH6-211ENST00000606499 LINC01465Q8N7H1 131 aa8.53□□□□□ -1.04
MSH6-211ENST00000606499 DHX38Q92620 1227 aaKnown RBP8.53□□□□□ -1.04
MSH6-211ENST00000606499 DDX12PQ92771 950 aa8.53□□□□□ -1.04
MSH6-211ENST00000606499 ERCC4Q92889 916 aaPredicted RBP8.53□□□□□ -1.04
MSH6-211ENST00000606499 TMEM143Q96AN5 459 aa8.53□□□□□ -1.04
MSH6-211ENST00000606499 DNAJC19Q96DA6 116 aa8.53□□□□□ -1.04
MSH6-211ENST00000606499 PPP1R16BQ96T49 567 aa8.53□□□□□ -1.04
MSH6-211ENST00000606499 TRIM9Q9C026 710 aa8.53□□□□□ -1.04
MSH6-211ENST00000606499 FAM49AQ9H0Q0 323 aaPredicted RBP8.53□□□□□ -1.04
MSH6-211ENST00000606499 POLR3FQ9H1D9 316 aaPredicted RBP8.53□□□□□ -1.04
MSH6-211ENST00000606499 SUGCTQ9HAC7 445 aa8.53□□□□□ -1.04
MSH6-211ENST00000606499 NOD1Q9Y239 953 aa8.53□□□□□ -1.04
MSH6-211ENST00000606499 ATP11BQ9Y2G3 1177 aa8.53□□□□□ -1.04
MSH6-211ENST00000606499 PPME1Q9Y570 386 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms