RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 TBC1D9BQ66K14 1250 aa16.56■□□□□ 0.24
LYSMD4-211ENST00000604213 PPP1R18Q6NYC8 613 aa16.56■□□□□ 0.24
LYSMD4-211ENST00000604213 ZDHHC24Q6UX98 284 aa16.56■□□□□ 0.24
LYSMD4-211ENST00000604213 GLG1Q92896 1179 aa16.56■□□□□ 0.24
LYSMD4-211ENST00000604213 NLRP3Q96P20 1036 aa16.56■□□□□ 0.24
LYSMD4-211ENST00000604213 ERVK-5Q9HDB9 667 aa16.56■□□□□ 0.24
LYSMD4-211ENST00000604213 DIS3Q9Y2L1 958 aaKnown RBP16.56■□□□□ 0.24
LYSMD4-211ENST00000604213 DAAM1Q9Y4D1 1078 aa16.56■□□□□ 0.24
LYSMD4-211ENST00000604213 FAM187AA6NFU0 413 aa16.56■□□□□ 0.24
LYSMD4-211ENST00000604213 IFI35P80217 286 aaPredicted RBP16.56■□□□□ 0.24
LYSMD4-211ENST00000604213 PPATQ06203 517 aa16.56■□□□□ 0.24
LYSMD4-211ENST00000604213 RIPK1Q13546 671 aa16.56■□□□□ 0.24
LYSMD4-211ENST00000604213 DCAF17Q5H9S7 520 aaPredicted RBP16.56■□□□□ 0.24
LYSMD4-211ENST00000604213 DENND2CQ68D51 928 aa16.56■□□□□ 0.24
LYSMD4-211ENST00000604213 EPM2AIP1Q7L775 607 aaPredicted RBP16.56■□□□□ 0.24
LYSMD4-211ENST00000604213 TEX11Q8IYF3 940 aa16.56■□□□□ 0.24
LYSMD4-211ENST00000604213 SLC35G2Q8TBE7 412 aa16.56■□□□□ 0.24
LYSMD4-211ENST00000604213 MTFR1LQ9H019 292 aa16.56■□□□□ 0.24
LYSMD4-211ENST00000604213 DHX36Q9H2U1 1008 aaKnown RBP16.56■□□□□ 0.24
LYSMD4-211ENST00000604213 CCDC134Q9H6E4 229 aa16.56■□□□□ 0.24
LYSMD4-211ENST00000604213 AZI2Q9H6S1 392 aa16.56■□□□□ 0.24
LYSMD4-211ENST00000604213 CCDC169A6NNP5 214 aa16.55■□□□□ 0.24
LYSMD4-211ENST00000604213 MED24O75448 989 aa16.55■□□□□ 0.24
LYSMD4-211ENST00000604213 GFPT2O94808 682 aa16.55■□□□□ 0.24
LYSMD4-211ENST00000604213 FERP16591 822 aa16.55■□□□□ 0.24
LYSMD4-211ENST00000604213 BTDP43251 543 aa16.55■□□□□ 0.24
LYSMD4-211ENST00000604213 SF3A3Q12874 501 aaKnown RBP eCLIP16.55■□□□□ 0.249e-7■■■■□ 24.7
LYSMD4-211ENST00000604213 PLS1Q14651 629 aa16.55■□□□□ 0.24
LYSMD4-211ENST00000604213 PPP2R5EQ16537 467 aa16.55■□□□□ 0.24
LYSMD4-211ENST00000604213 CRELD2Q6UXH1 353 aaPredicted RBP16.55■□□□□ 0.24
LYSMD4-211ENST00000604213 ADAT2Q7Z6V5 191 aaKnown RBP16.55■□□□□ 0.24
LYSMD4-211ENST00000604213 TBC1D31Q96DN5 1066 aa16.55■□□□□ 0.24
LYSMD4-211ENST00000604213 FAM212AQ96EL1 285 aa16.55■□□□□ 0.24
LYSMD4-211ENST00000604213 JMJD4Q9H9V9 463 aa16.55■□□□□ 0.24
LYSMD4-211ENST00000604213 GOPCQ9HD26 462 aa16.55■□□□□ 0.24
LYSMD4-211ENST00000604213 GPCPD1Q9NPB8 672 aa16.55■□□□□ 0.24
LYSMD4-211ENST00000604213 IGSF9BQ9UPX0 1349 aa16.55■□□□□ 0.24
LYSMD4-211ENST00000604213 PNMA6FA0A0J9YX94 578 aa16.55■□□□□ 0.24
LYSMD4-211ENST00000604213 TLDC2A0PJX2 215 aa16.55■□□□□ 0.24
LYSMD4-211ENST00000604213 KIAA0391O15091 583 aaKnown RBP16.55■□□□□ 0.24
LYSMD4-211ENST00000604213 SLC26A4O43511 780 aa16.55■□□□□ 0.24
LYSMD4-211ENST00000604213 PPP1R12BO60237 982 aaPredicted RBP16.55■□□□□ 0.24
LYSMD4-211ENST00000604213 PLTPP55058 493 aa16.55■□□□□ 0.24
LYSMD4-211ENST00000604213 PRPF4BQ13523 1007 aaKnown RBP16.55■□□□□ 0.24
LYSMD4-211ENST00000604213 RFFLQ8WZ73 363 aa16.55■□□□□ 0.24
LYSMD4-211ENST00000604213 SLC35C1Q96A29 364 aa16.55■□□□□ 0.24
LYSMD4-211ENST00000604213 ELAC2Q9BQ52 826 aaKnown RBP16.55■□□□□ 0.24
LYSMD4-211ENST00000604213 CARD9Q9H257 536 aa16.55■□□□□ 0.24
LYSMD4-211ENST00000604213 EBF2Q9HAK2 575 aa16.55■□□□□ 0.24
LYSMD4-211ENST00000604213 GCNT4Q9P109 453 aa16.55■□□□□ 0.24
LYSMD4-211ENST00000604213 TRPC6Q9Y210 931 aa16.55■□□□□ 0.24
LYSMD4-211ENST00000604213 SNX24Q9Y343 169 aa16.55■□□□□ 0.24
LYSMD4-211ENST00000604213 RPTORQ8N122 1335 aa16.54■□□□□ 0.24
LYSMD4-211ENST00000604213 A0A1B0GUA9 196 aa16.54■□□□□ 0.24
LYSMD4-211ENST00000604213 PDXKO00764 312 aa16.54■□□□□ 0.24
LYSMD4-211ENST00000604213 RGS16O15492 202 aaPredicted RBP16.54■□□□□ 0.24
LYSMD4-211ENST00000604213 RTN2O75298 545 aa16.54■□□□□ 0.24
LYSMD4-211ENST00000604213 RPSAP08865 295 aaKnown RBP16.54■□□□□ 0.24
LYSMD4-211ENST00000604213 TMEM253P0C7T8 217 aa16.54■□□□□ 0.24
LYSMD4-211ENST00000604213 SNHG28P0DPA3 235 aa16.54■□□□□ 0.24
LYSMD4-211ENST00000604213 STAT3P40763 770 aa16.54■□□□□ 0.24
LYSMD4-211ENST00000604213 DRG2P55039 364 aaKnown RBP16.54■□□□□ 0.24
LYSMD4-211ENST00000604213 GIT2Q14161 759 aa16.54■□□□□ 0.24
LYSMD4-211ENST00000604213 KIAA1755Q5JYT7 1200 aa16.54■□□□□ 0.24
LYSMD4-211ENST00000604213 TRPM8Q7Z2W7 1104 aa16.54■□□□□ 0.24
LYSMD4-211ENST00000604213 COL23A1Q86Y22 540 aaPredicted RBP16.54■□□□□ 0.24
LYSMD4-211ENST00000604213 JAMLQ86YT9 394 aa16.54■□□□□ 0.24
LYSMD4-211ENST00000604213 LRRC47Q8N1G4 583 aaKnown RBP16.54■□□□□ 0.24
LYSMD4-211ENST00000604213 TCP11Q8WWU5 503 aa16.54■□□□□ 0.24
LYSMD4-211ENST00000604213 STAMBPL1Q96FJ0 436 aa16.54■□□□□ 0.24
LYSMD4-211ENST00000604213 FAXDC2Q96IV6 333 aa16.54■□□□□ 0.24
LYSMD4-211ENST00000604213 INTS9Q9NV88 658 aaKnown RBP16.54■□□□□ 0.24
LYSMD4-211ENST00000604213 SAMD15Q9P1V8 674 aa16.54■□□□□ 0.24
LYSMD4-211ENST00000604213 POTEFA5A3E0 1075 aa16.53■□□□□ 0.24
LYSMD4-211ENST00000604213 CFAP73A6NFT4 308 aa16.53■□□□□ 0.24
LYSMD4-211ENST00000604213 CALUO43852 315 aaPredicted RBP16.53■□□□□ 0.24
LYSMD4-211ENST00000604213 POTEIP0CG38 1075 aa16.53■□□□□ 0.24
LYSMD4-211ENST00000604213 GBP2P32456 591 aaPredicted RBP16.53■□□□□ 0.24
LYSMD4-211ENST00000604213 CASP4P49662 377 aa16.53■□□□□ 0.24
LYSMD4-211ENST00000604213 DHX34Q14147 1143 aaKnown RBP16.53■□□□□ 0.24
LYSMD4-211ENST00000604213 SLC29A2Q14542 456 aa16.53■□□□□ 0.24
LYSMD4-211ENST00000604213 UBAP2Q5T6F2 1119 aaKnown RBP16.53■□□□□ 0.24
LYSMD4-211ENST00000604213 TCERG1LQ5VWI1 586 aa16.53■□□□□ 0.24
LYSMD4-211ENST00000604213 POTEGQ6S5H5 508 aa16.53■□□□□ 0.24
LYSMD4-211ENST00000604213 POTEEQ6S8J3 1075 aa16.53■□□□□ 0.24
LYSMD4-211ENST00000604213 SLC51AQ86UW1 340 aa16.53■□□□□ 0.24
LYSMD4-211ENST00000604213 SFR1Q86XK3 245 aa16.53■□□□□ 0.24
LYSMD4-211ENST00000604213 FBXO25Q8TCJ0 367 aa16.53■□□□□ 0.24
LYSMD4-211ENST00000604213 HOOK2Q96ED9 719 aa16.53■□□□□ 0.24
LYSMD4-211ENST00000604213 NAP1L3Q99457 506 aaPredicted RBP16.53■□□□□ 0.24
LYSMD4-211ENST00000604213 PRMT1Q99873 361 aaKnown RBP16.53■□□□□ 0.24
LYSMD4-211ENST00000604213 KCNMB3Q9NPA1 279 aa16.53■□□□□ 0.24
LYSMD4-211ENST00000604213 MTMR4Q9NYA4 1195 aa16.53■□□□□ 0.24
LYSMD4-211ENST00000604213 GRHL1Q9NZI5 618 aa16.53■□□□□ 0.24
LYSMD4-211ENST00000604213 AGAP1Q9UPQ3 857 aa16.53■□□□□ 0.24
LYSMD4-211ENST00000604213 AFF2P51816 1311 aa16.53■□□□□ 0.24
LYSMD4-211ENST00000604213 NHSQ6T4R5 1651 aa16.53■□□□□ 0.24
LYSMD4-211ENST00000604213 GOLGA6L10A0A0M3HER8 536 aa16.53■□□□□ 0.24
LYSMD4-211ENST00000604213 CCDC189A1A4V9 331 aa16.53■□□□□ 0.24
LYSMD4-211ENST00000604213 SMIM23A6NLE4 172 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms