RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 RWDD3Q9Y3V2 267 aa20.39■□□□□ 0.85
CCDC12-208ENST00000603885 H3BNC9 293 aa20.38■□□□□ 0.85
CCDC12-208ENST00000603885 CCNT1O60563 726 aaKnown RBP20.38■□□□□ 0.85
CCDC12-208ENST00000603885 DGKIO75912 1065 aa20.38■□□□□ 0.85
CCDC12-208ENST00000603885 CTNNB1P35222 781 aa20.38■□□□□ 0.85
CCDC12-208ENST00000603885 TBC1D8BQ0IIM8 1120 aa20.38■□□□□ 0.85
CCDC12-208ENST00000603885 GPM6BQ13491 265 aa20.38■□□□□ 0.85
CCDC12-208ENST00000603885 BTG3Q14201 252 aaPredicted RBP20.38■□□□□ 0.85
CCDC12-208ENST00000603885 XKR3Q5GH77 459 aa20.38■□□□□ 0.85
CCDC12-208ENST00000603885 ZNF710Q8N1W2 664 aa20.38■□□□□ 0.85
CCDC12-208ENST00000603885 LRRC71Q8N4P6 559 aa20.38■□□□□ 0.85
CCDC12-208ENST00000603885 LINC01465Q8N7H1 131 aa20.38■□□□□ 0.85
CCDC12-208ENST00000603885 ZNF689Q96CS4 500 aaPredicted RBP20.38■□□□□ 0.85
CCDC12-208ENST00000603885 KCNMB3Q9NPA1 279 aa20.38■□□□□ 0.85
CCDC12-208ENST00000603885 SEPT9Q9UHD8 586 aaPredicted RBP20.38■□□□□ 0.85
CCDC12-208ENST00000603885 ST3GAL5Q9UNP4 418 aa20.38■□□□□ 0.85
CCDC12-208ENST00000603885 GPR32O75388 356 aa20.37■□□□□ 0.85
CCDC12-208ENST00000603885 TFF2Q03403 129 aa20.37■□□□□ 0.85
CCDC12-208ENST00000603885 CRIPAKQ8N1N5 446 aa20.37■□□□□ 0.85
CCDC12-208ENST00000603885 HLA-CQ95604 372 aa20.37■□□□□ 0.85
CCDC12-208ENST00000603885 MRPL38Q96DV4 380 aaKnown RBP20.37■□□□□ 0.85
CCDC12-208ENST00000603885 LRFN2Q9ULH4 789 aa20.37■□□□□ 0.85
CCDC12-208ENST00000603885 DENND3A2RUS2 1198 aa20.36■□□□□ 0.85
CCDC12-208ENST00000603885 TBX3O15119 743 aa20.36■□□□□ 0.85
CCDC12-208ENST00000603885 MARCH6O60337 910 aa20.36■□□□□ 0.85
CCDC12-208ENST00000603885 JAK2O60674 1132 aa20.36■□□□□ 0.85
CCDC12-208ENST00000603885 RB1P06400 928 aa20.36■□□□□ 0.85
CCDC12-208ENST00000603885 BMPR1AP36894 532 aa20.36■□□□□ 0.85
CCDC12-208ENST00000603885 SARSP49591 514 aaKnown RBP20.36■□□□□ 0.85
CCDC12-208ENST00000603885 NLRP11P59045 1033 aaKnown RBP20.36■□□□□ 0.85
CCDC12-208ENST00000603885 NR5A1Q13285 461 aa20.36■□□□□ 0.85
CCDC12-208ENST00000603885 PPP2R5CQ13362 524 aa20.36■□□□□ 0.85
CCDC12-208ENST00000603885 TRIM29Q14134 588 aa20.36■□□□□ 0.85
CCDC12-208ENST00000603885 TARBP2Q15633 366 aaKnown RBP20.36■□□□□ 0.85
CCDC12-208ENST00000603885 MTERF2Q49AM1 385 aa20.36■□□□□ 0.85
CCDC12-208ENST00000603885 EARS2Q5JPH6 523 aaKnown RBP20.36■□□□□ 0.85
CCDC12-208ENST00000603885 FAM228AQ86W67 206 aa20.36■□□□□ 0.85
CCDC12-208ENST00000603885 CMTR2Q8IYT2 770 aaKnown RBP20.36■□□□□ 0.85
CCDC12-208ENST00000603885 CLP1Q92989 425 aaKnown RBP20.36■□□□□ 0.85
CCDC12-208ENST00000603885 ADAM2Q99965 735 aa20.36■□□□□ 0.85
CCDC12-208ENST00000603885 NIFKQ9BYG3 293 aaKnown RBP20.36■□□□□ 0.85
CCDC12-208ENST00000603885 C1orf112Q9NSG2 853 aa20.36■□□□□ 0.85
CCDC12-208ENST00000603885 RNF216Q9NWF9 866 aaPredicted RBP20.36■□□□□ 0.85
CCDC12-208ENST00000603885 VAV3Q9UKW4 847 aa20.36■□□□□ 0.85
CCDC12-208ENST00000603885 C5orf67F2Z3F1 127 aa20.35■□□□□ 0.85
CCDC12-208ENST00000603885 MGEA5O60502 916 aa20.35■□□□□ 0.85
CCDC12-208ENST00000603885 LINC00271P0C7V0 271 aa20.35■□□□□ 0.85
CCDC12-208ENST00000603885 IBSPP21815 317 aaPredicted RBP20.35■□□□□ 0.85
CCDC12-208ENST00000603885 PSMC5P62195 406 aa20.35■□□□□ 0.85
CCDC12-208ENST00000603885 TIGD5Q53EQ6 642 aa20.35■□□□□ 0.85
CCDC12-208ENST00000603885 BANK1Q8NDB2 785 aa20.35■□□□□ 0.85
CCDC12-208ENST00000603885 ADAMTS19Q8TE59 1207 aa20.35■□□□□ 0.85
CCDC12-208ENST00000603885 C11orf84Q9BUA3 381 aaPredicted RBP20.35■□□□□ 0.85
CCDC12-208ENST00000603885 RGS18Q9NS28 235 aa20.35■□□□□ 0.85
CCDC12-208ENST00000603885 LIMCH1Q9UPQ0 1083 aa20.35■□□□□ 0.85
CCDC12-208ENST00000603885 FAM205CA6NFA0 338 aa20.34■□□□□ 0.85
CCDC12-208ENST00000603885 DDX11L8A8MPP1 907 aa20.34■□□□□ 0.85
CCDC12-208ENST00000603885 EML1O00423 815 aa20.34■□□□□ 0.85
CCDC12-208ENST00000603885 DKC1O60832 514 aaKnown RBP eCLIP20.34■□□□□ 0.85
CCDC12-208ENST00000603885 STBD1O95210 358 aa20.34■□□□□ 0.85
CCDC12-208ENST00000603885 MMP1P03956 469 aa20.34■□□□□ 0.85
CCDC12-208ENST00000603885 SLC24A5Q71RS6 500 aa20.34■□□□□ 0.85
CCDC12-208ENST00000603885 POTEDQ86YR6 584 aa20.34■□□□□ 0.85
CCDC12-208ENST00000603885 SLFN12Q8IYM2 578 aa20.34■□□□□ 0.85
CCDC12-208ENST00000603885 HAS1Q92839 578 aa20.34■□□□□ 0.85
CCDC12-208ENST00000603885 TNFRSF25Q93038 417 aa20.34■□□□□ 0.85
CCDC12-208ENST00000603885 SCLT1Q96NL6 688 aa20.34■□□□□ 0.85
CCDC12-208ENST00000603885 ADAMTS10Q9H324 1103 aa20.34■□□□□ 0.85
CCDC12-208ENST00000603885 PCDHB7Q9Y5E2 793 aa20.34■□□□□ 0.85
CCDC12-208ENST00000603885 BRWD1Q9NSI6 2320 aa20.33■□□□□ 0.85
CCDC12-208ENST00000603885 TMEM150BA6NC51 233 aa20.33■□□□□ 0.85
CCDC12-208ENST00000603885 BAG4O95429 457 aaKnown RBP20.33■□□□□ 0.85
CCDC12-208ENST00000603885 EIF4BP23588 611 aaKnown RBP20.33■□□□□ 0.85
CCDC12-208ENST00000603885 QARSP47897 775 aaKnown RBP20.33■□□□□ 0.85
CCDC12-208ENST00000603885 GPC3P51654 580 aa20.33■□□□□ 0.85
CCDC12-208ENST00000603885 FOSBP53539 338 aa20.33■□□□□ 0.85
CCDC12-208ENST00000603885 ST3GAL1Q11201 340 aa20.33■□□□□ 0.85
CCDC12-208ENST00000603885 C8orf34Q49A92 452 aa20.33■□□□□ 0.85
CCDC12-208ENST00000603885 PAN2Q504Q3 1202 aaKnown RBP20.33■□□□□ 0.85
CCDC12-208ENST00000603885 DIS3L2Q8IYB7 885 aaKnown RBP20.33■□□□□ 0.85
CCDC12-208ENST00000603885 PLVAPQ9BX97 442 aa20.33■□□□□ 0.85
CCDC12-208ENST00000603885 MRPL42Q9Y6G3 142 aaKnown RBP20.33■□□□□ 0.85
CCDC12-208ENST00000603885 NCOR1O75376 2440 aa20.32■□□□□ 0.84
CCDC12-208ENST00000603885 BTBD18B2RXH4 712 aa20.32■□□□□ 0.84
CCDC12-208ENST00000603885 C9IYK1 514 aa20.32■□□□□ 0.84
CCDC12-208ENST00000603885 P4HBP07237 508 aaKnown RBP20.32■□□□□ 0.84
CCDC12-208ENST00000603885 BMP1P13497 986 aa20.32■□□□□ 0.84
CCDC12-208ENST00000603885 DNM2P50570 870 aa20.32■□□□□ 0.84
CCDC12-208ENST00000603885 KCNQ1P51787 676 aa20.32■□□□□ 0.84
CCDC12-208ENST00000603885 CDC42EP1Q00587 391 aa20.32■□□□□ 0.84
CCDC12-208ENST00000603885 ANO5Q75V66 913 aa20.32■□□□□ 0.84
CCDC12-208ENST00000603885 NLRP7Q8WX94 980 aa20.32■□□□□ 0.84
CCDC12-208ENST00000603885 ZNF668Q96K58 619 aaPredicted RBP20.32■□□□□ 0.84
CCDC12-208ENST00000603885 CEP89Q96ST8 783 aa20.32■□□□□ 0.84
CCDC12-208ENST00000603885 UHRF1Q96T88 793 aaPredicted RBP20.32■□□□□ 0.84
CCDC12-208ENST00000603885 SH2D3AQ9BRG2 576 aa20.32■□□□□ 0.84
CCDC12-208ENST00000603885 LMAN2LQ9H0V9 348 aa20.32■□□□□ 0.84
CCDC12-208ENST00000603885 IGKV6-21A0A0C4DH24 114 aa20.31■□□□□ 0.84
CCDC12-208ENST00000603885 DARSP14868 501 aaKnown RBP20.31■□□□□ 0.84
CCDC12-208ENST00000603885 GATMP50440 423 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms