RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-208ENST00000602726 LINC01465Q8N7H1 131 aa24.55■■□□□ 1.52
PPFIA3-208ENST00000602726 TGS1Q96RS0 853 aaKnown RBP24.55■■□□□ 1.52
PPFIA3-208ENST00000602726 OSMRQ99650 979 aa24.55■■□□□ 1.52
PPFIA3-208ENST00000602726 NOC2LQ9Y3T9 749 aaKnown RBP24.55■■□□□ 1.52
PPFIA3-208ENST00000602726 KIF3AQ9Y496 699 aa24.55■■□□□ 1.52
PPFIA3-208ENST00000602726 GPR32O75388 356 aa24.54■■□□□ 1.52
PPFIA3-208ENST00000602726 MCM7P33993 719 aa24.54■■□□□ 1.52
PPFIA3-208ENST00000602726 SPIRE1Q08AE8 756 aa24.54■■□□□ 1.52
PPFIA3-208ENST00000602726 ANO5Q75V66 913 aa24.54■■□□□ 1.52
PPFIA3-208ENST00000602726 SPRED2Q7Z698 418 aa24.54■■□□□ 1.52
PPFIA3-208ENST00000602726 TMEM40Q8WWA1 233 aa24.54■■□□□ 1.52
PPFIA3-208ENST00000602726 SH2D3AQ9BRG2 576 aa24.54■■□□□ 1.52
PPFIA3-208ENST00000602726 TTC12Q9H892 705 aaPredicted RBP24.54■■□□□ 1.52
PPFIA3-208ENST00000602726 TRANK1O15050 2925 aa24.54■■□□□ 1.52
PPFIA3-208ENST00000602726 EYSQ5T1H1 3165 aa24.53■■□□□ 1.52
PPFIA3-208ENST00000602726 EPOPA6NHQ4 379 aa24.53■■□□□ 1.52
PPFIA3-208ENST00000602726 GPR182O15218 404 aa24.53■■□□□ 1.52
PPFIA3-208ENST00000602726 CD2BP2O95400 341 aaKnown RBP24.53■■□□□ 1.52
PPFIA3-208ENST00000602726 TXKP42681 527 aa24.53■■□□□ 1.52
PPFIA3-208ENST00000602726 NLRP11P59045 1033 aaKnown RBP24.53■■□□□ 1.52
PPFIA3-208ENST00000602726 PLA2G4FQ68DD2 849 aa24.53■■□□□ 1.52
PPFIA3-208ENST00000602726 FAM43BQ6ZT52 329 aaPredicted RBP24.53■■□□□ 1.52
PPFIA3-208ENST00000602726 RTN4RL1Q86UN2 441 aaPredicted RBP24.53■■□□□ 1.52
PPFIA3-208ENST00000602726 SP7Q8TDD2 431 aaPredicted RBP24.53■■□□□ 1.52
PPFIA3-208ENST00000602726 LINC01599Q8WXQ3 324 aa24.53■■□□□ 1.52
PPFIA3-208ENST00000602726 PPM1EQ8WY54 764 aa24.53■■□□□ 1.52
PPFIA3-208ENST00000602726 LXNQ9BS40 222 aa24.53■■□□□ 1.52
PPFIA3-208ENST00000602726 ERVK-5Q9HDB9 667 aa24.53■■□□□ 1.52
PPFIA3-208ENST00000602726 RGL1Q9NZL6 768 aa24.53■■□□□ 1.52
PPFIA3-208ENST00000602726 MTUS1Q9ULD2 1270 aa24.53■■□□□ 1.52
PPFIA3-208ENST00000602726 ST3GAL5Q9UNP4 418 aa24.53■■□□□ 1.52
PPFIA3-208ENST00000602726 GTPBP6O43824 516 aaPredicted RBP24.52■■□□□ 1.52
PPFIA3-208ENST00000602726 DNM2P50570 870 aa24.52■■□□□ 1.52
PPFIA3-208ENST00000602726 ERVK-21P61565 698 aa24.52■■□□□ 1.52
PPFIA3-208ENST00000602726 NOSTRINQ8IVI9 506 aa24.52■■□□□ 1.52
PPFIA3-208ENST00000602726 DYDC2Q96IM9 177 aa24.52■■□□□ 1.52
PPFIA3-208ENST00000602726 SCLT1Q96NL6 688 aa24.52■■□□□ 1.52
PPFIA3-208ENST00000602726 MTMR9Q96QG7 549 aa24.52■■□□□ 1.52
PPFIA3-208ENST00000602726 CEP89Q96ST8 783 aa24.52■■□□□ 1.52
PPFIA3-208ENST00000602726 TSPYL2Q9H2G4 693 aaPredicted RBP24.52■■□□□ 1.52
PPFIA3-208ENST00000602726 ADAMTS10Q9H324 1103 aa24.52■■□□□ 1.52
PPFIA3-208ENST00000602726 TMX1Q9H3N1 280 aa24.52■■□□□ 1.52
PPFIA3-208ENST00000602726 ZSWIM4Q9H7M6 989 aa24.52■■□□□ 1.52
PPFIA3-208ENST00000602726 TTC3P53804 2025 aa24.52■■□□□ 1.52
PPFIA3-208ENST00000602726 CYP4A11Q02928 519 aa24.51■■□□□ 1.51
PPFIA3-208ENST00000602726 C4orf19Q8IY42 314 aa24.51■■□□□ 1.51
PPFIA3-208ENST00000602726 CEP170P1Q96L14 293 aa24.51■■□□□ 1.51
PPFIA3-208ENST00000602726 JPH2Q9BR39 696 aaPredicted RBP24.51■■□□□ 1.51
PPFIA3-208ENST00000602726 CYP26B1Q9NR63 512 aa24.51■■□□□ 1.51
PPFIA3-208ENST00000602726 WRAP73Q9P2S5 460 aaPredicted RBP24.51■■□□□ 1.51
PPFIA3-208ENST00000602726 PRUNE2Q8WUY3 3088 aa24.5■■□□□ 1.51
PPFIA3-208ENST00000602726 DENND3A2RUS2 1198 aa24.5■■□□□ 1.51
PPFIA3-208ENST00000602726 MAFO75444 373 aaPredicted RBP24.5■■□□□ 1.51
PPFIA3-208ENST00000602726 GPC3P51654 580 aa24.5■■□□□ 1.51
PPFIA3-208ENST00000602726 NPEPPSP55786 919 aa24.5■■□□□ 1.51
PPFIA3-208ENST00000602726 ORC2Q13416 577 aaPredicted RBP24.5■■□□□ 1.51
PPFIA3-208ENST00000602726 CTTNQ14247 550 aaKnown RBP24.5■■□□□ 1.51
PPFIA3-208ENST00000602726 ZNF174Q15697 407 aa24.5■■□□□ 1.51
PPFIA3-208ENST00000602726 CCDC85BQ15834 202 aaPredicted RBP24.5■■□□□ 1.51
PPFIA3-208ENST00000602726 OTUD6AQ7L8S5 288 aa24.5■■□□□ 1.51
PPFIA3-208ENST00000602726 FAM228AQ86W67 206 aa24.5■■□□□ 1.51
PPFIA3-208ENST00000602726 TPH2Q8IWU9 490 aa24.5■■□□□ 1.51
PPFIA3-208ENST00000602726 NLRP7Q8WX94 980 aa24.5■■□□□ 1.51
PPFIA3-208ENST00000602726 ZNF668Q96K58 619 aaPredicted RBP24.5■■□□□ 1.51
PPFIA3-208ENST00000602726 EIF2AK1Q9BQI3 630 aaKnown RBP24.5■■□□□ 1.51
PPFIA3-208ENST00000602726 BACH2Q9BYV9 841 aa24.5■■□□□ 1.51
PPFIA3-208ENST00000602726 TMEM60Q9H2L4 133 aa24.5■■□□□ 1.51
PPFIA3-208ENST00000602726 NOL7Q9UMY1 257 aaKnown RBP24.5■■□□□ 1.51
PPFIA3-208ENST00000602726 A0A0C4DFX4 3053 aa24.49■■□□□ 1.51
PPFIA3-208ENST00000602726 IGKV6-21A0A0C4DH24 114 aa24.49■■□□□ 1.51
PPFIA3-208ENST00000602726 STAG3L1P0CL83 205 aa24.49■■□□□ 1.51
PPFIA3-208ENST00000602726 YWHABP31946 246 aaKnown RBP24.49■■□□□ 1.51
PPFIA3-208ENST00000602726 CDC42EP1Q00587 391 aa24.49■■□□□ 1.51
PPFIA3-208ENST00000602726 GRB10Q13322 594 aa24.49■■□□□ 1.51
PPFIA3-208ENST00000602726 DRP2Q13474 957 aa24.49■■□□□ 1.51
PPFIA3-208ENST00000602726 TTC38Q5R3I4 469 aa24.49■■□□□ 1.51
PPFIA3-208ENST00000602726 NPAS4Q8IUM7 802 aa24.49■■□□□ 1.51
PPFIA3-208ENST00000602726 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.49■■□□□ 1.51
PPFIA3-208ENST00000602726 EXOC8Q8IYI6 725 aa24.49■■□□□ 1.51
PPFIA3-208ENST00000602726 MICALL1Q8N3F8 863 aa24.49■■□□□ 1.51
PPFIA3-208ENST00000602726 SLC7A3Q8WY07 619 aa24.49■■□□□ 1.51
PPFIA3-208ENST00000602726 C17orf80Q9BSJ5 609 aa24.49■■□□□ 1.51
PPFIA3-208ENST00000602726 SUCLA2Q9P2R7 463 aaPredicted RBP24.49■■□□□ 1.51
PPFIA3-208ENST00000602726 PPME1Q9Y570 386 aa24.49■■□□□ 1.51
PPFIA3-208ENST00000602726 SLITRK3O94933 977 aa24.48■■□□□ 1.51
PPFIA3-208ENST00000602726 POU3F3P20264 500 aaPredicted RBP24.48■■□□□ 1.51
PPFIA3-208ENST00000602726 IBSPP21815 317 aaPredicted RBP24.48■■□□□ 1.51
PPFIA3-208ENST00000602726 EIF4BP23588 611 aaKnown RBP24.48■■□□□ 1.51
PPFIA3-208ENST00000602726 U2AF2P26368 475 aaKnown RBP eCLIP24.48■■□□□ 1.51
PPFIA3-208ENST00000602726 TRAPPC10P48553 1259 aa24.48■■□□□ 1.51
PPFIA3-208ENST00000602726 PRRC2BQ5JSZ5 2229 aaKnown RBP24.48■■□□□ 1.51
PPFIA3-208ENST00000602726 FIBCD1Q8N539 461 aa24.48■■□□□ 1.51
PPFIA3-208ENST00000602726 NEK9Q8TD19 979 aa24.48■■□□□ 1.51
PPFIA3-208ENST00000602726 GDPD5Q8WTR4 605 aa24.48■■□□□ 1.51
PPFIA3-208ENST00000602726 SAMD11Q96NU1 681 aa24.48■■□□□ 1.51
PPFIA3-208ENST00000602726 ADAM2Q99965 735 aa24.48■■□□□ 1.51
PPFIA3-208ENST00000602726 HSD17B14Q9BPX1 270 aa24.48■■□□□ 1.51
PPFIA3-208ENST00000602726 LRFN2Q9ULH4 789 aa24.48■■□□□ 1.51
PPFIA3-208ENST00000602726 MTCH2Q9Y6C9 303 aa24.48■■□□□ 1.51
PPFIA3-208ENST00000602726 ADGRA3Q8IWK6 1321 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms