RNA–Protein interactions for RNA: ENST00000602308.1

TRIM11-205, Transcript of tripartite motif containing 11, humanhuman

TSL 3

Gene TRIM11, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-205ENST00000602308 TMEM117Q9H0C3 514 aa16.6■□□□□ 0.25
TRIM11-205ENST00000602308 SFXN1Q9H9B4 322 aa16.6■□□□□ 0.25
TRIM11-205ENST00000602308 TMEM161AQ9NX61 479 aa16.6■□□□□ 0.25
TRIM11-205ENST00000602308 ZSCAN32Q9NX65 697 aa16.6■□□□□ 0.25
TRIM11-205ENST00000602308 RTEL1Q9NZ71 1219 aa16.6■□□□□ 0.25
TRIM11-205ENST00000602308 GMEB2Q9UKD1 530 aa16.6■□□□□ 0.25
TRIM11-205ENST00000602308 NOC2LQ9Y3T9 749 aaKnown RBP16.6■□□□□ 0.25
TRIM11-205ENST00000602308 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.59■□□□□ 0.25
TRIM11-205ENST00000602308 TBC1D4O60343 1298 aa16.59■□□□□ 0.25
TRIM11-205ENST00000602308 PPP1R11O60927 126 aaPredicted RBP16.59■□□□□ 0.25
TRIM11-205ENST00000602308 INSRRP14616 1297 aa16.59■□□□□ 0.25
TRIM11-205ENST00000602308 STARD6P59095 220 aa16.59■□□□□ 0.25
TRIM11-205ENST00000602308 PTPN14Q15678 1187 aa16.59■□□□□ 0.25
TRIM11-205ENST00000602308 FCHSD1Q86WN1 690 aa16.59■□□□□ 0.25
TRIM11-205ENST00000602308 AMNQ9BXJ7 453 aa16.59■□□□□ 0.25
TRIM11-205ENST00000602308 ERAP1Q9NZ08 941 aa16.59■□□□□ 0.25
TRIM11-205ENST00000602308 GSTTP1A0A1W2PQM5 241 aa16.58■□□□□ 0.24
TRIM11-205ENST00000602308 NT5C1B-RDH14C9J2C7 533 aa16.58■□□□□ 0.24
TRIM11-205ENST00000602308 FIBPO43427 364 aa16.58■□□□□ 0.24
TRIM11-205ENST00000602308 DHX16O60231 1041 aaKnown RBP16.58■□□□□ 0.24
TRIM11-205ENST00000602308 GBP2P32456 591 aaPredicted RBP16.58■□□□□ 0.24
TRIM11-205ENST00000602308 KRT76Q01546 638 aa16.58■□□□□ 0.24
TRIM11-205ENST00000602308 TMEM40Q8WWA1 233 aa16.58■□□□□ 0.24
TRIM11-205ENST00000602308 SENP7Q9BQF6 1050 aa16.58■□□□□ 0.24
TRIM11-205ENST00000602308 ZBP1Q9H171 429 aa16.58■□□□□ 0.24
TRIM11-205ENST00000602308 ELAC1Q9H777 363 aaKnown RBP16.58■□□□□ 0.24
TRIM11-205ENST00000602308 CDHR5Q9HBB8 845 aa16.58■□□□□ 0.24
TRIM11-205ENST00000602308 ST3GAL5Q9UNP4 418 aa16.58■□□□□ 0.24
TRIM11-205ENST00000602308 IRAK3Q9Y616 596 aa16.58■□□□□ 0.24
TRIM11-205ENST00000602308 C2orf16Q68DN1 1984 aa16.57■□□□□ 0.24
TRIM11-205ENST00000602308 C1QTNF9BB2RNN3 333 aa16.57■□□□□ 0.24
TRIM11-205ENST00000602308 GDF9O60383 454 aa16.57■□□□□ 0.24
TRIM11-205ENST00000602308 RPS6KA5O75582 802 aa16.57■□□□□ 0.24
TRIM11-205ENST00000602308 C1QTNF9P0C862 333 aa16.57■□□□□ 0.24
TRIM11-205ENST00000602308 VPS52Q8N1B4 723 aa16.57■□□□□ 0.24
TRIM11-205ENST00000602308 LRRC43Q8N309 656 aa16.57■□□□□ 0.24
TRIM11-205ENST00000602308 TMEM87AQ8NBN3 555 aa16.57■□□□□ 0.24
TRIM11-205ENST00000602308 TRAPPC12Q8WVT3 735 aa16.57■□□□□ 0.24
TRIM11-205ENST00000602308 MYADMQ96S97 322 aa16.57■□□□□ 0.24
TRIM11-205ENST00000602308 ZKSCAN3Q9BRR0 538 aa16.57■□□□□ 0.24
TRIM11-205ENST00000602308 BCO2Q9BYV7 579 aa16.57■□□□□ 0.24
TRIM11-205ENST00000602308 EPS15L1Q9UBC2 864 aa16.57■□□□□ 0.24
TRIM11-205ENST00000602308 MTF2Q9Y483 593 aaPredicted RBP16.57■□□□□ 0.24
TRIM11-205ENST00000602308 PCDHA2Q9Y5H9 948 aa16.57■□□□□ 0.24
TRIM11-205ENST00000602308 RRN3P2A6NIE6 340 aa16.56■□□□□ 0.24
TRIM11-205ENST00000602308 METAP2P50579 478 aaKnown RBP eCLIP16.56■□□□□ 0.24
TRIM11-205ENST00000602308 LPAL2Q16609 132 aa16.56■□□□□ 0.24
TRIM11-205ENST00000602308 TSSK4Q6SA08 328 aa16.56■□□□□ 0.24
TRIM11-205ENST00000602308 SAMD3Q8N6K7 520 aa16.56■□□□□ 0.24
TRIM11-205ENST00000602308 PANK1Q8TE04 598 aa16.56■□□□□ 0.24
TRIM11-205ENST00000602308 LRRCC1Q9C099 1032 aa16.56■□□□□ 0.24
TRIM11-205ENST00000602308 SLC2A4RGQ9NR83 387 aa16.56■□□□□ 0.24
TRIM11-205ENST00000602308 GINS2Q9Y248 185 aa16.56■□□□□ 0.24
TRIM11-205ENST00000602308 MYH6P13533 1939 aa16.56■□□□□ 0.24
TRIM11-205ENST00000602308 COL4A3Q01955 1670 aa16.56■□□□□ 0.24
TRIM11-205ENST00000602308 GCOM1H8Y6P7 765 aaPredicted RBP16.55■□□□□ 0.24
TRIM11-205ENST00000602308 STAM2O75886 525 aa16.55■□□□□ 0.24
TRIM11-205ENST00000602308 ZIC2O95409 532 aaPredicted RBP16.55■□□□□ 0.24
TRIM11-205ENST00000602308 POLR2MP0CAP2 368 aa16.55■□□□□ 0.24
TRIM11-205ENST00000602308 BMS1Q14692 1282 aaKnown RBP16.55■□□□□ 0.24
TRIM11-205ENST00000602308 LRSAM1Q6UWE0 723 aa16.55■□□□□ 0.24
TRIM11-205ENST00000602308 C15orf39Q6ZRI6 1047 aa16.55■□□□□ 0.24
TRIM11-205ENST00000602308 FAM43BQ6ZT52 329 aaPredicted RBP16.55■□□□□ 0.24
TRIM11-205ENST00000602308 TMEM173Q86WV6 379 aaPredicted RBP16.55■□□□□ 0.24
TRIM11-205ENST00000602308 PNMA1Q8ND90 353 aa16.55■□□□□ 0.24
TRIM11-205ENST00000602308 ST13P5Q8NFI4 369 aaPredicted RBP16.55■□□□□ 0.24
TRIM11-205ENST00000602308 SEPT1Q8WYJ6 367 aa16.55■□□□□ 0.24
TRIM11-205ENST00000602308 NXPE3Q969Y0 559 aa16.55■□□□□ 0.24
TRIM11-205ENST00000602308 GCN1Q92616 2671 aaKnown RBP16.55■□□□□ 0.24
TRIM11-205ENST00000602308 PATJQ8NI35 1801 aa16.54■□□□□ 0.24
TRIM11-205ENST00000602308 FRMPD4Q14CM0 1322 aa16.54■□□□□ 0.24
TRIM11-205ENST00000602308 KANSL1LA0AUZ9 987 aa16.54■□□□□ 0.24
TRIM11-205ENST00000602308 SPDYE4A6NLX3 237 aa16.54■□□□□ 0.24
TRIM11-205ENST00000602308 ATP9AO75110 1047 aa16.54■□□□□ 0.24
TRIM11-205ENST00000602308 CTSAP10619 480 aa16.54■□□□□ 0.24
TRIM11-205ENST00000602308 DSC3Q14574 896 aa16.54■□□□□ 0.24
TRIM11-205ENST00000602308 WTAPQ15007 396 aa16.54■□□□□ 0.24
TRIM11-205ENST00000602308 ASPRV1Q53RT3 343 aa16.54■□□□□ 0.24
TRIM11-205ENST00000602308 NME8Q8N427 588 aa16.54■□□□□ 0.24
TRIM11-205ENST00000602308 KDF1Q8NAX2 398 aaPredicted RBP16.54■□□□□ 0.24
TRIM11-205ENST00000602308 DDX23Q9BUQ8 820 aaKnown RBP16.54■□□□□ 0.24
TRIM11-205ENST00000602308 SMARCAD1Q9H4L7 1026 aa16.54■□□□□ 0.24
TRIM11-205ENST00000602308 WDR6Q9NNW5 1121 aaKnown RBP16.54■□□□□ 0.24
TRIM11-205ENST00000602308 SEMA4GQ9NTN9 838 aa16.54■□□□□ 0.24
TRIM11-205ENST00000602308 IGF2RP11717 2491 aa16.54■□□□□ 0.24
TRIM11-205ENST00000602308 SMIM35A0A1B0GVV1 85 aa16.53■□□□□ 0.24
TRIM11-205ENST00000602308 HOXA2O43364 376 aa16.53■□□□□ 0.24
TRIM11-205ENST00000602308 SNW1Q13573 536 aaKnown RBP16.53■□□□□ 0.24
TRIM11-205ENST00000602308 GIT2Q14161 759 aa16.53■□□□□ 0.24
TRIM11-205ENST00000602308 PLCB4Q15147 1175 aa16.53■□□□□ 0.24
TRIM11-205ENST00000602308 ALX1Q15699 326 aa16.53■□□□□ 0.24
TRIM11-205ENST00000602308 CLLU1OSQ5K130 101 aa16.53■□□□□ 0.24
TRIM11-205ENST00000602308 UNQ6494/PRO21346Q6UXR6 183 aa16.53■□□□□ 0.24
TRIM11-205ENST00000602308 PRR23CQ6ZRP0 262 aa16.53■□□□□ 0.24
TRIM11-205ENST00000602308 PPFIBP1Q86W92 1011 aa16.53■□□□□ 0.24
TRIM11-205ENST00000602308 DGKHQ86XP1 1220 aa16.53■□□□□ 0.24
TRIM11-205ENST00000602308 DDX1Q92499 740 aaKnown RBP16.53■□□□□ 0.24
TRIM11-205ENST00000602308 MTMR8Q96EF0 704 aa16.53■□□□□ 0.24
TRIM11-205ENST00000602308 TMEM169Q96HH4 297 aa16.53■□□□□ 0.24
TRIM11-205ENST00000602308 SHDQ96IW2 340 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms