RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 RNF26Q9BY78 433 aaPredicted RBP14.9□□□□□ -0.02
RPS28-204ENST00000602140 NCOA5Q9HCD5 579 aaKnown RBP14.9□□□□□ -0.02
RPS28-204ENST00000602140 C1orf112Q9NSG2 853 aa14.9□□□□□ -0.02
RPS28-204ENST00000602140 RNF216Q9NWF9 866 aaPredicted RBP14.9□□□□□ -0.02
RPS28-204ENST00000602140 VPS54Q9P1Q0 977 aa14.9□□□□□ -0.02
RPS28-204ENST00000602140 C19orf67A6NJJ6 358 aa14.89□□□□□ -0.03
RPS28-204ENST00000602140 TBKBP1A7MCY6 615 aa14.89□□□□□ -0.03
RPS28-204ENST00000602140 PRR33A8MZF0 331 aa14.89□□□□□ -0.03
RPS28-204ENST00000602140 C9IYK1 514 aa14.89□□□□□ -0.03
RPS28-204ENST00000602140 DCXO43602 365 aa14.89□□□□□ -0.03
RPS28-204ENST00000602140 IFNAR1P17181 557 aa14.89□□□□□ -0.03
RPS28-204ENST00000602140 PDIA3P30101 505 aaKnown RBP14.89□□□□□ -0.03
RPS28-204ENST00000602140 NDUFV1P49821 464 aa14.89□□□□□ -0.03
RPS28-204ENST00000602140 CLCN3P51790 818 aa14.89□□□□□ -0.03
RPS28-204ENST00000602140 CCT2P78371 535 aaKnown RBP14.89□□□□□ -0.03
RPS28-204ENST00000602140 SMAD4Q13485 552 aaKnown RBP14.89□□□□□ -0.03
RPS28-204ENST00000602140 CCDC148Q8NFR7 591 aa14.89□□□□□ -0.03
RPS28-204ENST00000602140 CD207Q9UJ71 328 aa14.89□□□□□ -0.03
RPS28-204ENST00000602140 CEP131Q9UPN4 1083 aa14.89□□□□□ -0.03
RPS28-204ENST00000602140 ARIH1Q9Y4X5 557 aaPredicted RBP14.89□□□□□ -0.03
RPS28-204ENST00000602140 PCDHB12Q9Y5F1 795 aa14.89□□□□□ -0.03
RPS28-204ENST00000602140 WDR64B1ANS9 1081 aa14.88□□□□□ -0.03
RPS28-204ENST00000602140 MAGEB2O15479 319 aa14.88□□□□□ -0.03
RPS28-204ENST00000602140 EDIL3O43854 480 aa14.88□□□□□ -0.03
RPS28-204ENST00000602140 REC8O95072 547 aa14.88□□□□□ -0.03
RPS28-204ENST00000602140 NRIP1P48552 1158 aa14.88□□□□□ -0.03
RPS28-204ENST00000602140 NLRP11P59045 1033 aaKnown RBP14.88□□□□□ -0.03
RPS28-204ENST00000602140 EFCAB12Q6NXP0 572 aa14.88□□□□□ -0.03
RPS28-204ENST00000602140 RBM23Q86U06 439 aaKnown RBP14.88□□□□□ -0.03
RPS28-204ENST00000602140 EFHBQ8N7U6 833 aa14.88□□□□□ -0.03
RPS28-204ENST00000602140 MICAL1Q8TDZ2 1067 aa14.88□□□□□ -0.03
RPS28-204ENST00000602140 CCDC136Q96JN2 1154 aa14.88□□□□□ -0.03
RPS28-204ENST00000602140 FAM167AQ96KS9 214 aa14.88□□□□□ -0.03
RPS28-204ENST00000602140 ATP6V0A4Q9HBG4 840 aa14.88□□□□□ -0.03
RPS28-204ENST00000602140 AAASQ9NRG9 546 aa14.88□□□□□ -0.03
RPS28-204ENST00000602140 DISC1Q9NRI5 854 aa14.88□□□□□ -0.03
RPS28-204ENST00000602140 HCSTQ9UBK5 93 aa14.88□□□□□ -0.03
RPS28-204ENST00000602140 AKT3Q9Y243 479 aa14.88□□□□□ -0.03
RPS28-204ENST00000602140 PCDHGC5Q9Y5F6 944 aa14.88□□□□□ -0.03
RPS28-204ENST00000602140 EVPLQ92817 2033 aa14.88□□□□□ -0.03
RPS28-204ENST00000602140 MSH4O15457 936 aa14.87□□□□□ -0.03
RPS28-204ENST00000602140 CHMP2AO43633 222 aa14.87□□□□□ -0.03
RPS28-204ENST00000602140 ZNF862O60290 1169 aa14.87□□□□□ -0.03
RPS28-204ENST00000602140 GAS7O60861 476 aa14.87□□□□□ -0.03
RPS28-204ENST00000602140 FGFR1P11362 822 aa14.87□□□□□ -0.03
RPS28-204ENST00000602140 USP11P51784 963 aa14.87□□□□□ -0.03
RPS28-204ENST00000602140 EVCP57679 992 aa14.87□□□□□ -0.03
RPS28-204ENST00000602140 NLRP5P59047 1200 aa14.87□□□□□ -0.03
RPS28-204ENST00000602140 FAM189BP81408 668 aa14.87□□□□□ -0.03
RPS28-204ENST00000602140 DSC3Q14574 896 aa14.87□□□□□ -0.03
RPS28-204ENST00000602140 CSPP1Q1MSJ5 1256 aa14.87□□□□□ -0.03
RPS28-204ENST00000602140 LRRC71Q8N4P6 559 aa14.87□□□□□ -0.03
RPS28-204ENST00000602140 MSLNLQ96KJ4 702 aa14.87□□□□□ -0.03
RPS28-204ENST00000602140 MAP7D2Q96T17 732 aa14.87□□□□□ -0.03
RPS28-204ENST00000602140 POP1Q99575 1024 aaKnown RBP14.87□□□□□ -0.03
RPS28-204ENST00000602140 UPF3BQ9BZI7 483 aaKnown RBP14.87□□□□□ -0.03
RPS28-204ENST00000602140 SH3GLB2Q9NR46 395 aa14.87□□□□□ -0.03
RPS28-204ENST00000602140 NRBP2Q9NSY0 501 aa14.87□□□□□ -0.03
RPS28-204ENST00000602140 TYW1Q9NV66 732 aaKnown RBP14.87□□□□□ -0.03
RPS28-204ENST00000602140 TMEM161AQ9NX61 479 aa14.87□□□□□ -0.03
RPS28-204ENST00000602140 CLEC1BQ9P126 229 aa14.87□□□□□ -0.03
RPS28-204ENST00000602140 MYH9P35579 1960 aaKnown RBP14.86□□□□□ -0.03
RPS28-204ENST00000602140 FGF18O76093 207 aa14.86□□□□□ -0.03
RPS28-204ENST00000602140 OATP04181 439 aa14.86□□□□□ -0.03
RPS28-204ENST00000602140 TMOD1P28289 359 aa14.86□□□□□ -0.03
RPS28-204ENST00000602140 PRKCEQ02156 737 aa14.86□□□□□ -0.03
RPS28-204ENST00000602140 UBE3AQ05086 875 aa14.86□□□□□ -0.03
RPS28-204ENST00000602140 UGCGQ16739 394 aa14.86□□□□□ -0.03
RPS28-204ENST00000602140 LRCH2Q5VUJ6 765 aa14.86□□□□□ -0.03
RPS28-204ENST00000602140 RUFY3Q7L099 469 aa14.86□□□□□ -0.03
RPS28-204ENST00000602140 THNSL1Q8IYQ7 743 aa14.86□□□□□ -0.03
RPS28-204ENST00000602140 LINC01465Q8N7H1 131 aa14.86□□□□□ -0.03
RPS28-204ENST00000602140 COLGALT1Q8NBJ5 622 aa14.86□□□□□ -0.03
RPS28-204ENST00000602140 SLC5A5Q92911 643 aa14.86□□□□□ -0.03
RPS28-204ENST00000602140 GJA10Q969M2 543 aa14.86□□□□□ -0.03
RPS28-204ENST00000602140 ZNF668Q96K58 619 aaPredicted RBP14.86□□□□□ -0.03
RPS28-204ENST00000602140 RIT2Q99578 217 aa14.86□□□□□ -0.03
RPS28-204ENST00000602140 ADAMTS10Q9H324 1103 aa14.86□□□□□ -0.03
RPS28-204ENST00000602140 UNC45AQ9H3U1 944 aa14.86□□□□□ -0.03
RPS28-204ENST00000602140 ELAC1Q9H777 363 aaKnown RBP14.86□□□□□ -0.03
RPS28-204ENST00000602140 TLE6Q9H808 572 aa14.86□□□□□ -0.03
RPS28-204ENST00000602140 TLR9Q9NR96 1032 aa14.86□□□□□ -0.03
RPS28-204ENST00000602140 FNDC1Q4ZHG4 1894 aaPredicted RBP14.86□□□□□ -0.03
RPS28-204ENST00000602140 PLXNA4Q9HCM2 1894 aa14.86□□□□□ -0.03
RPS28-204ENST00000602140 PER2O15055 1255 aa14.85□□□□□ -0.03
RPS28-204ENST00000602140 EYA4O95677 639 aa14.85□□□□□ -0.03
RPS28-204ENST00000602140 GLP2RO95838 553 aa14.85□□□□□ -0.03
RPS28-204ENST00000602140 ZSCAN20P17040 1043 aaPredicted RBP14.85□□□□□ -0.03
RPS28-204ENST00000602140 EIF4BP23588 611 aaKnown RBP14.85□□□□□ -0.03
RPS28-204ENST00000602140 SFNP31947 248 aa14.85□□□□□ -0.03
RPS28-204ENST00000602140 SSRP1Q08945 709 aaKnown RBP14.85□□□□□ -0.03
RPS28-204ENST00000602140 TOB2Q14106 344 aaPredicted RBP14.85□□□□□ -0.03
RPS28-204ENST00000602140 TRIM22Q8IYM9 498 aa14.85□□□□□ -0.03
RPS28-204ENST00000602140 TBCKQ8TEA7 893 aa14.85□□□□□ -0.03
RPS28-204ENST00000602140 LARP6Q9BRS8 491 aaKnown RBP14.85□□□□□ -0.03
RPS28-204ENST00000602140 TEKT3Q9BXF9 490 aa14.85□□□□□ -0.03
RPS28-204ENST00000602140 CWH43Q9H720 699 aa14.85□□□□□ -0.03
RPS28-204ENST00000602140 ZSWIM6Q9HCJ5 1215 aa14.85□□□□□ -0.03
RPS28-204ENST00000602140 BARX2Q9UMQ3 279 aaPredicted RBP14.85□□□□□ -0.03
RPS28-204ENST00000602140 PCDHA4Q9UN74 947 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms