RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 LETM2Q2VYF4 491 aa25.53■■□□□ 1.68
SSBP4-209ENST00000601357 EFCAB12Q6NXP0 572 aa25.53■■□□□ 1.68
SSBP4-209ENST00000601357 MIER3Q7Z3K6 550 aa25.53■■□□□ 1.68
SSBP4-209ENST00000601357 NEK8Q86SG6 692 aa25.53■■□□□ 1.68
SSBP4-209ENST00000601357 WASF1Q92558 559 aa25.53■■□□□ 1.68
SSBP4-209ENST00000601357 OSMRQ99650 979 aa25.53■■□□□ 1.68
SSBP4-209ENST00000601357 KCNMB3Q9NPA1 279 aa25.53■■□□□ 1.68
SSBP4-209ENST00000601357 ST3GAL5Q9UNP4 418 aa25.53■■□□□ 1.68
SSBP4-209ENST00000601357 RWDD3Q9Y3V2 267 aa25.53■■□□□ 1.68
SSBP4-209ENST00000601357 RB1P06400 928 aa25.52■■□□□ 1.68
SSBP4-209ENST00000601357 GCFC2P16383 781 aaKnown RBP25.52■■□□□ 1.68
SSBP4-209ENST00000601357 BMPR1AP36894 532 aa25.52■■□□□ 1.68
SSBP4-209ENST00000601357 NEK4P51957 841 aa25.52■■□□□ 1.68
SSBP4-209ENST00000601357 BTG3Q14201 252 aaPredicted RBP25.52■■□□□ 1.68
SSBP4-209ENST00000601357 ODR4Q5SWX8 454 aa25.52■■□□□ 1.68
SSBP4-209ENST00000601357 FAM228AQ86W67 206 aa25.52■■□□□ 1.68
SSBP4-209ENST00000601357 CMTR2Q8IYT2 770 aaKnown RBP25.52■■□□□ 1.68
SSBP4-209ENST00000601357 CEP89Q96ST8 783 aa25.52■■□□□ 1.68
SSBP4-209ENST00000601357 PPP1R16BQ96T49 567 aa25.52■■□□□ 1.68
SSBP4-209ENST00000601357 NIFKQ9BYG3 293 aaKnown RBP25.52■■□□□ 1.68
SSBP4-209ENST00000601357 RGS18Q9NS28 235 aa25.52■■□□□ 1.68
SSBP4-209ENST00000601357 GPR182O15218 404 aa25.51■■□□□ 1.67
SSBP4-209ENST00000601357 STAG3L1P0CL83 205 aa25.51■■□□□ 1.67
SSBP4-209ENST00000601357 CTNNB1P35222 781 aa25.51■■□□□ 1.67
SSBP4-209ENST00000601357 SARSP49591 514 aaKnown RBP25.51■■□□□ 1.67
SSBP4-209ENST00000601357 ZNF710Q8N1W2 664 aa25.51■■□□□ 1.67
SSBP4-209ENST00000601357 LRRC71Q8N4P6 559 aa25.51■■□□□ 1.67
SSBP4-209ENST00000601357 FAM20AQ96MK3 541 aa25.51■■□□□ 1.67
SSBP4-209ENST00000601357 ADAMTS10Q9H324 1103 aa25.51■■□□□ 1.67
SSBP4-209ENST00000601357 VAV3Q9UKW4 847 aa25.51■■□□□ 1.67
SSBP4-209ENST00000601357 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.5■■□□□ 1.67
SSBP4-209ENST00000601357 TNFRSF10AO00220 468 aa25.5■■□□□ 1.67
SSBP4-209ENST00000601357 TMOD1P28289 359 aa25.5■■□□□ 1.67
SSBP4-209ENST00000601357 PPP2R5CQ13362 524 aa25.5■■□□□ 1.67
SSBP4-209ENST00000601357 XKR3Q5GH77 459 aa25.5■■□□□ 1.67
SSBP4-209ENST00000601357 EARS2Q5JPH6 523 aaKnown RBP25.5■■□□□ 1.67
SSBP4-209ENST00000601357 PIK3AP1Q6ZUJ8 805 aa25.5■■□□□ 1.67
SSBP4-209ENST00000601357 NSUN7Q8NE18 718 aaKnown RBP25.5■■□□□ 1.67
SSBP4-209ENST00000601357 IL27Q8NEV9 243 aa25.5■■□□□ 1.67
SSBP4-209ENST00000601357 TNFRSF25Q93038 417 aa25.5■■□□□ 1.67
SSBP4-209ENST00000601357 MAP7D2Q96T17 732 aa25.5■■□□□ 1.67
SSBP4-209ENST00000601357 ADAM2Q99965 735 aa25.5■■□□□ 1.67
SSBP4-209ENST00000601357 C11orf84Q9BUA3 381 aaPredicted RBP25.5■■□□□ 1.67
SSBP4-209ENST00000601357 TCF20Q9UGU0 1960 aaKnown RBP25.5■■□□□ 1.67
SSBP4-209ENST00000601357 MRPL42Q9Y6G3 142 aaKnown RBP25.5■■□□□ 1.67
SSBP4-209ENST00000601357 C9IYK1 514 aa25.49■■□□□ 1.67
SSBP4-209ENST00000601357 NLRP11P59045 1033 aaKnown RBP25.49■■□□□ 1.67
SSBP4-209ENST00000601357 TIGD5Q53EQ6 642 aa25.49■■□□□ 1.67
SSBP4-209ENST00000601357 UHRF1Q96T88 793 aaPredicted RBP25.49■■□□□ 1.67
SSBP4-209ENST00000601357 C1orf112Q9NSG2 853 aa25.49■■□□□ 1.67
SSBP4-209ENST00000601357 AKT3Q9Y243 479 aa25.49■■□□□ 1.67
SSBP4-209ENST00000601357 EML1O00423 815 aa25.48■■□□□ 1.67
SSBP4-209ENST00000601357 TBX3O15119 743 aa25.48■■□□□ 1.67
SSBP4-209ENST00000601357 TBC1D8BQ0IIM8 1120 aa25.48■■□□□ 1.67
SSBP4-209ENST00000601357 NR5A1Q13285 461 aa25.48■■□□□ 1.67
SSBP4-209ENST00000601357 DSC3Q14574 896 aa25.48■■□□□ 1.67
SSBP4-209ENST00000601357 SLC24A5Q71RS6 500 aa25.48■■□□□ 1.67
SSBP4-209ENST00000601357 BANK1Q8NDB2 785 aa25.48■■□□□ 1.67
SSBP4-209ENST00000601357 HAS1Q92839 578 aa25.48■■□□□ 1.67
SSBP4-209ENST00000601357 NAP1L4Q99733 375 aaKnown RBP25.48■■□□□ 1.67
SSBP4-209ENST00000601357 PLVAPQ9BX97 442 aa25.48■■□□□ 1.67
SSBP4-209ENST00000601357 UBE2ZQ9H832 354 aaPredicted RBP25.48■■□□□ 1.67
SSBP4-209ENST00000601357 SEPT9Q9UHD8 586 aaPredicted RBP25.48■■□□□ 1.67
SSBP4-209ENST00000601357 FNDC1Q4ZHG4 1894 aaPredicted RBP25.48■■□□□ 1.67
SSBP4-209ENST00000601357 IGKV6-21A0A0C4DH24 114 aa25.47■■□□□ 1.67
SSBP4-209ENST00000601357 DENND3A2RUS2 1198 aa25.47■■□□□ 1.67
SSBP4-209ENST00000601357 TMEM150BA6NC51 233 aa25.47■■□□□ 1.67
SSBP4-209ENST00000601357 FAM205CA6NFA0 338 aa25.47■■□□□ 1.67
SSBP4-209ENST00000601357 GRM6O15303 877 aa25.47■■□□□ 1.67
SSBP4-209ENST00000601357 CCNT1O60563 726 aaKnown RBP25.47■■□□□ 1.67
SSBP4-209ENST00000601357 GPC3P51654 580 aa25.47■■□□□ 1.67
SSBP4-209ENST00000601357 FAM189BP81408 668 aa25.47■■□□□ 1.67
SSBP4-209ENST00000601357 ST3GAL1Q11201 340 aa25.47■■□□□ 1.67
SSBP4-209ENST00000601357 COL19A1Q14993 1142 aa25.47■■□□□ 1.67
SSBP4-209ENST00000601357 LMAN2LQ9H0V9 348 aa25.47■■□□□ 1.67
SSBP4-209ENST00000601357 LRFN2Q9ULH4 789 aa25.47■■□□□ 1.67
SSBP4-209ENST00000601357 BRWD1Q9NSI6 2320 aa25.47■■□□□ 1.67
SSBP4-209ENST00000601357 EIF4BP23588 611 aaKnown RBP25.46■■□□□ 1.67
SSBP4-209ENST00000601357 KRT2P35908 639 aa25.46■■□□□ 1.67
SSBP4-209ENST00000601357 GATMP50440 423 aa25.46■■□□□ 1.67
SSBP4-209ENST00000601357 PSMC5P62195 406 aa25.46■■□□□ 1.67
SSBP4-209ENST00000601357 ANO5Q75V66 913 aa25.46■■□□□ 1.67
SSBP4-209ENST00000601357 P2RX5Q93086 422 aa25.46■■□□□ 1.67
SSBP4-209ENST00000601357 RNF216Q9NWF9 866 aaPredicted RBP25.46■■□□□ 1.67
SSBP4-209ENST00000601357 PCDHB7Q9Y5E2 793 aa25.46■■□□□ 1.67
SSBP4-209ENST00000601357 JAK2O60674 1132 aa25.45■■□□□ 1.66
SSBP4-209ENST00000601357 DRP2Q13474 957 aa25.45■■□□□ 1.66
SSBP4-209ENST00000601357 MTERF2Q49AM1 385 aa25.45■■□□□ 1.66
SSBP4-209ENST00000601357 PAN2Q504Q3 1202 aaKnown RBP25.45■■□□□ 1.66
SSBP4-209ENST00000601357 POTEDQ86YR6 584 aa25.45■■□□□ 1.66
SSBP4-209ENST00000601357 NECAB3Q96P71 396 aaPredicted RBP25.45■■□□□ 1.66
SSBP4-209ENST00000601357 NSUN3Q9H649 340 aaKnown RBP25.45■■□□□ 1.66
SSBP4-209ENST00000601357 MMP1P03956 469 aa25.44■■□□□ 1.66
SSBP4-209ENST00000601357 DARSP14868 501 aaKnown RBP25.44■■□□□ 1.66
SSBP4-209ENST00000601357 SPIRE1Q08AE8 756 aa25.44■■□□□ 1.66
SSBP4-209ENST00000601357 NAALADL2Q58DX5 795 aa25.44■■□□□ 1.66
SSBP4-209ENST00000601357 TCEAL5Q5H9L2 206 aa25.44■■□□□ 1.66
SSBP4-209ENST00000601357 SH2D3AQ9BRG2 576 aa25.44■■□□□ 1.66
SSBP4-209ENST00000601357 ELAC1Q9H777 363 aaKnown RBP25.44■■□□□ 1.66
SSBP4-209ENST00000601357 BRMS1Q9HCU9 246 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms