RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 PCDHGC5Q9Y5F6 944 aa20.39■□□□□ 0.85
CHMP2A-208ENST00000601220 MSH4O15457 936 aa20.38■□□□□ 0.85
CHMP2A-208ENST00000601220 DCXO43602 365 aa20.38■□□□□ 0.85
CHMP2A-208ENST00000601220 VTNP04004 478 aa20.38■□□□□ 0.85
CHMP2A-208ENST00000601220 CKAP2LQ8IYA6 745 aa20.38■□□□□ 0.85
CHMP2A-208ENST00000601220 VPS54Q9P1Q0 977 aa20.38■□□□□ 0.85
CHMP2A-208ENST00000601220 CD207Q9UJ71 328 aa20.38■□□□□ 0.85
CHMP2A-208ENST00000601220 DENND3A2RUS2 1198 aa20.37■□□□□ 0.85
CHMP2A-208ENST00000601220 TBKBP1A7MCY6 615 aa20.37■□□□□ 0.85
CHMP2A-208ENST00000601220 GLP2RO95838 553 aa20.37■□□□□ 0.85
CHMP2A-208ENST00000601220 HOXD11P31277 338 aaPredicted RBP20.37■□□□□ 0.85
CHMP2A-208ENST00000601220 CLCN3P51790 818 aa20.37■□□□□ 0.85
CHMP2A-208ENST00000601220 ODR4Q5SWX8 454 aa20.37■□□□□ 0.85
CHMP2A-208ENST00000601220 TRMT1LQ7Z2T5 733 aaKnown RBP20.37■□□□□ 0.85
CHMP2A-208ENST00000601220 METTL13Q8N6R0 699 aa20.37■□□□□ 0.85
CHMP2A-208ENST00000601220 BICD2Q8TD16 824 aa20.37■□□□□ 0.85
CHMP2A-208ENST00000601220 CWH43Q9H720 699 aa20.37■□□□□ 0.85
CHMP2A-208ENST00000601220 ELAC1Q9H777 363 aaKnown RBP20.37■□□□□ 0.85
CHMP2A-208ENST00000601220 NCOA5Q9HCD5 579 aaKnown RBP20.37■□□□□ 0.85
CHMP2A-208ENST00000601220 RNF19AQ9NV58 838 aa20.37■□□□□ 0.85
CHMP2A-208ENST00000601220 TYW1Q9NV66 732 aaKnown RBP20.37■□□□□ 0.85
CHMP2A-208ENST00000601220 MAGEB2O15479 319 aa20.36■□□□□ 0.85
CHMP2A-208ENST00000601220 FGFR1P11362 822 aa20.36■□□□□ 0.85
CHMP2A-208ENST00000601220 IBSPP21815 317 aaPredicted RBP20.36■□□□□ 0.85
CHMP2A-208ENST00000601220 NRIP1P48552 1158 aa20.36■□□□□ 0.85
CHMP2A-208ENST00000601220 USP11P51784 963 aa20.36■□□□□ 0.85
CHMP2A-208ENST00000601220 COASYQ13057 564 aa20.36■□□□□ 0.85
CHMP2A-208ENST00000601220 SLC5A5Q92911 643 aa20.36■□□□□ 0.85
CHMP2A-208ENST00000601220 SLC26A6Q9BXS9 759 aa20.36■□□□□ 0.85
CHMP2A-208ENST00000601220 TMEM161AQ9NX61 479 aa20.36■□□□□ 0.85
CHMP2A-208ENST00000601220 CEP131Q9UPN4 1083 aa20.36■□□□□ 0.85
CHMP2A-208ENST00000601220 KIAA1671Q9BY89 1806 aa20.36■□□□□ 0.85
CHMP2A-208ENST00000601220 LOXHD1Q8IVV2 1947 aa20.35■□□□□ 0.85
CHMP2A-208ENST00000601220 WDR64B1ANS9 1081 aa20.35■□□□□ 0.85
CHMP2A-208ENST00000601220 PSMA5P28066 241 aa20.35■□□□□ 0.85
CHMP2A-208ENST00000601220 NLRP11P59045 1033 aaKnown RBP20.35■□□□□ 0.85
CHMP2A-208ENST00000601220 CCT2P78371 535 aaKnown RBP20.35■□□□□ 0.85
CHMP2A-208ENST00000601220 AKAP17AQ02040 695 aaKnown RBP20.35■□□□□ 0.85
CHMP2A-208ENST00000601220 UBE3AQ05086 875 aa20.35■□□□□ 0.85
CHMP2A-208ENST00000601220 TOB2Q14106 344 aaPredicted RBP20.35■□□□□ 0.85
CHMP2A-208ENST00000601220 UGCGQ16739 394 aa20.35■□□□□ 0.85
CHMP2A-208ENST00000601220 EFCAB12Q6NXP0 572 aa20.35■□□□□ 0.85
CHMP2A-208ENST00000601220 LRRC55Q6ZSA7 311 aa20.35■□□□□ 0.85
CHMP2A-208ENST00000601220 SMRP1Q8NCR6 262 aa20.35■□□□□ 0.85
CHMP2A-208ENST00000601220 CCDC148Q8NFR7 591 aa20.35■□□□□ 0.85
CHMP2A-208ENST00000601220 GJA10Q969M2 543 aa20.35■□□□□ 0.85
CHMP2A-208ENST00000601220 PPP2R3CQ969Q6 453 aa20.35■□□□□ 0.85
CHMP2A-208ENST00000601220 CCDC136Q96JN2 1154 aa20.35■□□□□ 0.85
CHMP2A-208ENST00000601220 FAM167AQ96KS9 214 aa20.35■□□□□ 0.85
CHMP2A-208ENST00000601220 RIT2Q99578 217 aa20.35■□□□□ 0.85
CHMP2A-208ENST00000601220 SH3GLB2Q9NR46 395 aa20.35■□□□□ 0.85
CHMP2A-208ENST00000601220 DISC1Q9NRI5 854 aa20.35■□□□□ 0.85
CHMP2A-208ENST00000601220 RNF216Q9NWF9 866 aaPredicted RBP20.35■□□□□ 0.85
CHMP2A-208ENST00000601220 PCDHB12Q9Y5F1 795 aa20.35■□□□□ 0.85
CHMP2A-208ENST00000601220 FSCN2O14926 492 aa20.34■□□□□ 0.85
CHMP2A-208ENST00000601220 FGF18O76093 207 aa20.34■□□□□ 0.85
CHMP2A-208ENST00000601220 OATP04181 439 aa20.34■□□□□ 0.85
CHMP2A-208ENST00000601220 NDUFV1P49821 464 aa20.34■□□□□ 0.85
CHMP2A-208ENST00000601220 ERVFC1P60507 584 aa20.34■□□□□ 0.85
CHMP2A-208ENST00000601220 B3GNT9Q6UX72 402 aa20.34■□□□□ 0.85
CHMP2A-208ENST00000601220 RBM23Q86U06 439 aaKnown RBP20.34■□□□□ 0.85
CHMP2A-208ENST00000601220 LRRC71Q8N4P6 559 aa20.34■□□□□ 0.85
CHMP2A-208ENST00000601220 COLGALT1Q8NBJ5 622 aa20.34■□□□□ 0.85
CHMP2A-208ENST00000601220 VN1R2Q8NFZ6 395 aa20.34■□□□□ 0.85
CHMP2A-208ENST00000601220 CASD1Q96PB1 797 aa20.34■□□□□ 0.85
CHMP2A-208ENST00000601220 CEP89Q96ST8 783 aa20.34■□□□□ 0.85
CHMP2A-208ENST00000601220 UNC45AQ9H3U1 944 aa20.34■□□□□ 0.85
CHMP2A-208ENST00000601220 ATP6V0A4Q9HBG4 840 aa20.34■□□□□ 0.85
CHMP2A-208ENST00000601220 ZSWIM6Q9HCJ5 1215 aa20.34■□□□□ 0.85
CHMP2A-208ENST00000601220 SAMM50Q9Y512 469 aa20.34■□□□□ 0.85
CHMP2A-208ENST00000601220 M0R2N6 131 aa20.33■□□□□ 0.85
CHMP2A-208ENST00000601220 STBD1O95210 358 aa20.33■□□□□ 0.85
CHMP2A-208ENST00000601220 EIF4BP23588 611 aaKnown RBP20.33■□□□□ 0.85
CHMP2A-208ENST00000601220 PRKCEQ02156 737 aa20.33■□□□□ 0.85
CHMP2A-208ENST00000601220 TARBP2Q15633 366 aaKnown RBP20.33■□□□□ 0.85
CHMP2A-208ENST00000601220 NPY5RQ15761 445 aa20.33■□□□□ 0.85
CHMP2A-208ENST00000601220 HERC4Q5GLZ8 1057 aaPredicted RBP20.33■□□□□ 0.85
CHMP2A-208ENST00000601220 RNF135Q8IUD6 432 aa20.33■□□□□ 0.85
CHMP2A-208ENST00000601220 POP1Q99575 1024 aaKnown RBP20.33■□□□□ 0.85
CHMP2A-208ENST00000601220 UPF3BQ9BZI7 483 aaKnown RBP20.33■□□□□ 0.85
CHMP2A-208ENST00000601220 AAASQ9NRG9 546 aa20.33■□□□□ 0.85
CHMP2A-208ENST00000601220 NRBP2Q9NSY0 501 aa20.33■□□□□ 0.85
CHMP2A-208ENST00000601220 BARX2Q9UMQ3 279 aaPredicted RBP20.33■□□□□ 0.85
CHMP2A-208ENST00000601220 CYP3A7-CYP3A51PA0A087WV96 503 aa20.32■□□□□ 0.84
CHMP2A-208ENST00000601220 PER2O15055 1255 aa20.32■□□□□ 0.84
CHMP2A-208ENST00000601220 PSMD10O75832 226 aa20.32■□□□□ 0.84
CHMP2A-208ENST00000601220 CYP3A7P24462 503 aa20.32■□□□□ 0.84
CHMP2A-208ENST00000601220 GPC3P51654 580 aa20.32■□□□□ 0.84
CHMP2A-208ENST00000601220 RBM10P98175 930 aaKnown RBP20.32■□□□□ 0.84
CHMP2A-208ENST00000601220 KCNC3Q14003 757 aa20.32■□□□□ 0.84
CHMP2A-208ENST00000601220 Q4G0T1 1027 aa20.32■□□□□ 0.84
CHMP2A-208ENST00000601220 RUFY3Q7L099 469 aa20.32■□□□□ 0.84
CHMP2A-208ENST00000601220 ZNF710Q8N1W2 664 aa20.32■□□□□ 0.84
CHMP2A-208ENST00000601220 TBCKQ8TEA7 893 aa20.32■□□□□ 0.84
CHMP2A-208ENST00000601220 MBOAT7Q96N66 472 aa20.32■□□□□ 0.84
CHMP2A-208ENST00000601220 TMEM117Q9H0C3 514 aa20.32■□□□□ 0.84
CHMP2A-208ENST00000601220 TLE6Q9H808 572 aa20.32■□□□□ 0.84
CHMP2A-208ENST00000601220 TLR9Q9NR96 1032 aa20.32■□□□□ 0.84
CHMP2A-208ENST00000601220 MUTYHQ9UIF7 546 aa20.32■□□□□ 0.84
CHMP2A-208ENST00000601220 AKT3Q9Y243 479 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms