RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 CNNM4Q6P4Q7 775 aa25.48■■□□□ 1.67
IRF3-227ENST00000600911 SYAP1Q96A49 352 aaPredicted RBP25.48■■□□□ 1.67
IRF3-227ENST00000600911 FUCA2Q9BTY2 467 aa25.48■■□□□ 1.67
IRF3-227ENST00000600911 MCOLN1Q9GZU1 580 aa25.48■■□□□ 1.67
IRF3-227ENST00000600911 HIP1RO75146 1068 aa25.48■■□□□ 1.67
IRF3-227ENST00000600911 ZNF200P98182 395 aaPredicted RBP25.48■■□□□ 1.67
IRF3-227ENST00000600911 MKRN4PQ13434 485 aaPredicted RBP25.48■■□□□ 1.67
IRF3-227ENST00000600911 RNF180Q86T96 592 aa25.48■■□□□ 1.67
IRF3-227ENST00000600911 MTG1Q9BT17 334 aaPredicted RBP25.48■■□□□ 1.67
IRF3-227ENST00000600911 SETD4Q9NVD3 440 aa25.48■■□□□ 1.67
IRF3-227ENST00000600911 FRMD3A2A2Y4 597 aa25.47■■□□□ 1.67
IRF3-227ENST00000600911 C22orf31O95567 290 aa25.47■■□□□ 1.67
IRF3-227ENST00000600911 MNX1P50219 401 aaPredicted RBP25.47■■□□□ 1.67
IRF3-227ENST00000600911 ACLYP53396 1101 aa25.47■■□□□ 1.67
IRF3-227ENST00000600911 EHHADHQ08426 723 aa25.47■■□□□ 1.67
IRF3-227ENST00000600911 EMC2Q15006 297 aa25.47■■□□□ 1.67
IRF3-227ENST00000600911 GLIS3Q8NEA6 775 aa25.47■■□□□ 1.67
IRF3-227ENST00000600911 SMARCE1Q969G3 411 aa25.47■■□□□ 1.67
IRF3-227ENST00000600911 CCDC43Q96MW1 224 aaKnown RBP25.47■■□□□ 1.67
IRF3-227ENST00000600911 HDAC6Q9UBN7 1215 aa25.47■■□□□ 1.67
IRF3-227ENST00000600911 OGDHLQ9ULD0 1010 aa25.47■■□□□ 1.67
IRF3-227ENST00000600911 IDEP14735 1019 aa25.46■■□□□ 1.67
IRF3-227ENST00000600911 GUCY2CP25092 1073 aa25.46■■□□□ 1.67
IRF3-227ENST00000600911 AMPD3Q01432 767 aa25.46■■□□□ 1.67
IRF3-227ENST00000600911 PPFIA1Q13136 1202 aa25.46■■□□□ 1.67
IRF3-227ENST00000600911 GRIK4Q16099 956 aa25.46■■□□□ 1.67
IRF3-227ENST00000600911 NBPF20Q3BBV1 942 aa25.46■■□□□ 1.67
IRF3-227ENST00000600911 LRRC71Q8N4P6 559 aa25.46■■□□□ 1.67
IRF3-227ENST00000600911 LMBR1Q8WVP7 490 aa25.46■■□□□ 1.67
IRF3-227ENST00000600911 BSNDQ8WZ55 320 aa25.46■■□□□ 1.67
IRF3-227ENST00000600911 MAFO75444 373 aaPredicted RBP25.45■■□□□ 1.67
IRF3-227ENST00000600911 KRT18P05783 430 aaKnown RBP25.45■■□□□ 1.67
IRF3-227ENST00000600911 COASYQ13057 564 aa25.45■■□□□ 1.67
IRF3-227ENST00000600911 UNC13DQ70J99 1090 aa25.45■■□□□ 1.67
IRF3-227ENST00000600911 SMYD4Q8IYR2 804 aaPredicted RBP25.45■■□□□ 1.67
IRF3-227ENST00000600911 TMEM143Q96AN5 459 aa25.45■■□□□ 1.67
IRF3-227ENST00000600911 IGKV6-21A0A0C4DH24 114 aa25.45■■□□□ 1.66
IRF3-227ENST00000600911 DGAT1O75907 488 aa25.45■■□□□ 1.66
IRF3-227ENST00000600911 POLGP54098 1239 aaPredicted RBP25.45■■□□□ 1.66
IRF3-227ENST00000600911 ADAM17P78536 824 aa25.45■■□□□ 1.66
IRF3-227ENST00000600911 ZNF484Q5JVG2 852 aa25.45■■□□□ 1.66
IRF3-227ENST00000600911 CRISPLD2Q9H0B8 497 aa25.45■■□□□ 1.66
IRF3-227ENST00000600911 ATP6V0A4Q9HBG4 840 aa25.45■■□□□ 1.66
IRF3-227ENST00000600911 PANK4Q9NVE7 773 aa25.45■■□□□ 1.66
IRF3-227ENST00000600911 GDAQ9Y2T3 454 aa25.45■■□□□ 1.66
IRF3-227ENST00000600911 ZEB2O60315 1214 aa25.44■■□□□ 1.66
IRF3-227ENST00000600911 KPNA6O60684 536 aa25.44■■□□□ 1.66
IRF3-227ENST00000600911 MYL1P05976 194 aa25.44■■□□□ 1.66
IRF3-227ENST00000600911 GJB1P08034 283 aa25.44■■□□□ 1.66
IRF3-227ENST00000600911 KLRC1P26715 233 aa25.44■■□□□ 1.66
IRF3-227ENST00000600911 HOXC8P31273 242 aa25.44■■□□□ 1.66
IRF3-227ENST00000600911 MORC3Q14149 939 aa25.44■■□□□ 1.66
IRF3-227ENST00000600911 FAM102BQ5T8I3 360 aa25.44■■□□□ 1.66
IRF3-227ENST00000600911 SFR1Q86XK3 245 aa25.44■■□□□ 1.66
IRF3-227ENST00000600911 LINC01465Q8N7H1 131 aa25.44■■□□□ 1.66
IRF3-227ENST00000600911 PCSK9Q8NBP7 692 aaKnown RBP25.44■■□□□ 1.66
IRF3-227ENST00000600911 U2AF1L4Q8WU68 220 aaKnown RBP25.44■■□□□ 1.66
IRF3-227ENST00000600911 FIZ1Q96SL8 496 aa25.44■■□□□ 1.66
IRF3-227ENST00000600911 TBC1D7Q9P0N9 293 aa25.44■■□□□ 1.66
IRF3-227ENST00000600911 HOOK1Q9UJC3 728 aaKnown RBP25.44■■□□□ 1.66
IRF3-227ENST00000600911 PCDHA2Q9Y5H9 948 aa25.44■■□□□ 1.66
IRF3-227ENST00000600911 A0A1W2PQ45 241 aaPredicted RBP25.43■■□□□ 1.66
IRF3-227ENST00000600911 A0A1W2PQY0 241 aa25.43■■□□□ 1.66
IRF3-227ENST00000600911 CLCN3P51790 818 aa25.43■■□□□ 1.66
IRF3-227ENST00000600911 ZNF131P52739 623 aa25.43■■□□□ 1.66
IRF3-227ENST00000600911 TBC1D8BQ0IIM8 1120 aa25.43■■□□□ 1.66
IRF3-227ENST00000600911 MTHFD1LQ6UB35 978 aa25.43■■□□□ 1.66
IRF3-227ENST00000600911 ASAP3Q8TDY4 903 aa25.43■■□□□ 1.66
IRF3-227ENST00000600911 ZHX3Q9H4I2 956 aa25.43■■□□□ 1.66
IRF3-227ENST00000600911 KCND2Q9NZV8 630 aa25.43■■□□□ 1.66
IRF3-227ENST00000600911 COL1A2P08123 1366 aa25.43■■□□□ 1.66
IRF3-227ENST00000600911 KIAA0100Q14667 2235 aaKnown RBP25.43■■□□□ 1.66
IRF3-227ENST00000600911 RHOBTB3O94955 611 aa25.42■■□□□ 1.66
IRF3-227ENST00000600911 SGPL1O95470 568 aa25.42■■□□□ 1.66
IRF3-227ENST00000600911 STK4Q13043 487 aa25.42■■□□□ 1.66
IRF3-227ENST00000600911 RUFY4Q6ZNE9 571 aa25.42■■□□□ 1.66
IRF3-227ENST00000600911 KIAA0895Q8NCT3 520 aa25.42■■□□□ 1.66
IRF3-227ENST00000600911 GSDMAQ96QA5 445 aa25.42■■□□□ 1.66
IRF3-227ENST00000600911 CTAGE1Q96RT6 745 aa25.42■■□□□ 1.66
IRF3-227ENST00000600911 KATNAL1Q9BW62 490 aa25.42■■□□□ 1.66
IRF3-227ENST00000600911 LRRC27Q9C0I9 530 aa25.42■■□□□ 1.66
IRF3-227ENST00000600911 PHF24Q9UPV7 400 aa25.42■■□□□ 1.66
IRF3-227ENST00000600911 PVALEFA0A1B0GWK0 134 aa25.41■■□□□ 1.66
IRF3-227ENST00000600911 TREHO43280 583 aa25.41■■□□□ 1.66
IRF3-227ENST00000600911 SMC2O95347 1197 aa25.41■■□□□ 1.66
IRF3-227ENST00000600911 RFC5P40937 340 aa25.41■■□□□ 1.66
IRF3-227ENST00000600911 CASP5P51878 434 aa25.41■■□□□ 1.66
IRF3-227ENST00000600911 DPCR1Q3MIW9 517 aa25.41■■□□□ 1.66
IRF3-227ENST00000600911 GDF6Q6KF10 455 aaPredicted RBP25.41■■□□□ 1.66
IRF3-227ENST00000600911 ARRDC4Q8NCT1 418 aa25.41■■□□□ 1.66
IRF3-227ENST00000600911 CCDC34Q96HJ3 373 aa25.41■■□□□ 1.66
IRF3-227ENST00000600911 TSEN34Q9BSV6 310 aaKnown RBP25.41■■□□□ 1.66
IRF3-227ENST00000600911 POLR3FQ9H1D9 316 aaPredicted RBP25.41■■□□□ 1.66
IRF3-227ENST00000600911 SUGCTQ9HAC7 445 aa25.41■■□□□ 1.66
IRF3-227ENST00000600911 MKI67P46013 3256 aaKnown RBP25.41■■□□□ 1.66
IRF3-227ENST00000600911 MOXD2PA6NHM9 499 aa25.41■■□□□ 1.66
IRF3-227ENST00000600911 CD44P16070 742 aaKnown RBP25.41■■□□□ 1.66
IRF3-227ENST00000600911 TYRO3Q06418 890 aa25.41■■□□□ 1.66
IRF3-227ENST00000600911 KCNB1Q14721 858 aa25.41■■□□□ 1.66
IRF3-227ENST00000600911 KSR1Q8IVT5 923 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms