RNA–Protein interactions for RNA: ENST00000600840.1

TRIM28-214, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 338 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-214ENST00000600840 NRCAMQ92823 1304 aa9.86□□□□□ -0.83
TRIM28-214ENST00000600840 MBLAC1A4D2B0 266 aaPredicted RBP9.86□□□□□ -0.83
TRIM28-214ENST00000600840 PSMD10O75832 226 aa9.86□□□□□ -0.83
TRIM28-214ENST00000600840 GHRP10912 638 aa9.86□□□□□ -0.83
TRIM28-214ENST00000600840 GCFC2P16383 781 aaKnown RBP9.86□□□□□ -0.83
TRIM28-214ENST00000600840 NASPP49321 788 aaPredicted RBP9.86□□□□□ -0.83
TRIM28-214ENST00000600840 PTPN5P54829 565 aa9.86□□□□□ -0.83
TRIM28-214ENST00000600840 IGBP1P78318 339 aa9.86□□□□□ -0.83
TRIM28-214ENST00000600840 SPIRE1Q08AE8 756 aa9.86□□□□□ -0.83
TRIM28-214ENST00000600840 ORC2Q13416 577 aaPredicted RBP9.86□□□□□ -0.83
TRIM28-214ENST00000600840 LPIN1Q14693 890 aa9.86□□□□□ -0.83
TRIM28-214ENST00000600840 ZNF174Q15697 407 aa9.86□□□□□ -0.83
TRIM28-214ENST00000600840 GRIK4Q16099 956 aa9.86□□□□□ -0.83
TRIM28-214ENST00000600840 IL17AQ16552 155 aa9.86□□□□□ -0.83
TRIM28-214ENST00000600840 TTC38Q5R3I4 469 aa9.86□□□□□ -0.83
TRIM28-214ENST00000600840 FOXD4L5Q5VV16 416 aaPredicted RBP9.86□□□□□ -0.83
TRIM28-214ENST00000600840 SP7Q8TDD2 431 aaPredicted RBP9.86□□□□□ -0.83
TRIM28-214ENST00000600840 FOXD4L4Q8WXT5 416 aaPredicted RBP9.86□□□□□ -0.83
TRIM28-214ENST00000600840 EVPLQ92817 2033 aa9.86□□□□□ -0.83
TRIM28-214ENST00000600840 SLC5A5Q92911 643 aa9.86□□□□□ -0.83
TRIM28-214ENST00000600840 TOP1MTQ969P6 601 aa9.86□□□□□ -0.83
TRIM28-214ENST00000600840 PABPC5Q96DU9 382 aaKnown RBP9.86□□□□□ -0.83
TRIM28-214ENST00000600840 AGO4Q9HCK5 861 aaKnown RBP9.86□□□□□ -0.83
TRIM28-214ENST00000600840 CLDND1Q9NY35 253 aa9.86□□□□□ -0.83
TRIM28-214ENST00000600840 PRKAG3Q9UGI9 489 aa9.86□□□□□ -0.83
TRIM28-214ENST00000600840 ZNF215Q9UL58 517 aaPredicted RBP9.86□□□□□ -0.83
TRIM28-214ENST00000600840 CLIC4Q9Y696 253 aa9.86□□□□□ -0.83
TRIM28-214ENST00000600840 WDR81Q562E7 1941 aa9.86□□□□□ -0.83
TRIM28-214ENST00000600840 WDFY4Q6ZS81 3184 aa9.85□□□□□ -0.83
TRIM28-214ENST00000600840 MYO7AQ13402 2215 aa9.85□□□□□ -0.83
TRIM28-214ENST00000600840 DDX39AO00148 427 aaKnown RBP9.85□□□□□ -0.83
TRIM28-214ENST00000600840 TBX3O15119 743 aa9.85□□□□□ -0.83
TRIM28-214ENST00000600840 CCNT1O60563 726 aaKnown RBP9.85□□□□□ -0.83
TRIM28-214ENST00000600840 EFCAB14O75071 495 aa9.85□□□□□ -0.83
TRIM28-214ENST00000600840 CAND2O75155 1236 aa9.85□□□□□ -0.83
TRIM28-214ENST00000600840 CCNE2O96020 404 aa9.85□□□□□ -0.83
TRIM28-214ENST00000600840 AMHP03971 560 aa9.85□□□□□ -0.83
TRIM28-214ENST00000600840 LINC00271P0C7V0 271 aa9.85□□□□□ -0.83
TRIM28-214ENST00000600840 GNAT1P11488 350 aa9.85□□□□□ -0.83
TRIM28-214ENST00000600840 INSRRP14616 1297 aa9.85□□□□□ -0.83
TRIM28-214ENST00000600840 LTBRP36941 435 aa9.85□□□□□ -0.83
TRIM28-214ENST00000600840 ACTR2P61160 394 aa9.85□□□□□ -0.83
TRIM28-214ENST00000600840 DLX2Q07687 328 aaPredicted RBP9.85□□□□□ -0.83
TRIM28-214ENST00000600840 PPFIA1Q13136 1202 aa9.85□□□□□ -0.83
TRIM28-214ENST00000600840 PLCB4Q15147 1175 aa9.85□□□□□ -0.83
TRIM28-214ENST00000600840 PRR16Q569H4 304 aa9.85□□□□□ -0.83
TRIM28-214ENST00000600840 HERC4Q5GLZ8 1057 aaPredicted RBP9.85□□□□□ -0.83
TRIM28-214ENST00000600840 CLEC17AQ6ZS10 378 aa9.85□□□□□ -0.83
TRIM28-214ENST00000600840 RTN4RL1Q86UN2 441 aaPredicted RBP9.85□□□□□ -0.83
TRIM28-214ENST00000600840 PLA2G4DQ86XP0 818 aa9.85□□□□□ -0.83
TRIM28-214ENST00000600840 RNF135Q8IUD6 432 aa9.85□□□□□ -0.83
TRIM28-214ENST00000600840 LINC00301Q8NCQ3 95 aa9.85□□□□□ -0.83
TRIM28-214ENST00000600840 GIMAP8Q8ND71 665 aaPredicted RBP9.85□□□□□ -0.83
TRIM28-214ENST00000600840 BANK1Q8NDB2 785 aa9.85□□□□□ -0.83
TRIM28-214ENST00000600840 LINC01599Q8WXQ3 324 aa9.85□□□□□ -0.83
TRIM28-214ENST00000600840 SEPT8Q92599 483 aa9.85□□□□□ -0.83
TRIM28-214ENST00000600840 GLG1Q92896 1179 aa9.85□□□□□ -0.83
TRIM28-214ENST00000600840 GJA10Q969M2 543 aa9.85□□□□□ -0.83
TRIM28-214ENST00000600840 CDHR1Q96JP9 859 aa9.85□□□□□ -0.83
TRIM28-214ENST00000600840 NAP1L4Q99733 375 aaKnown RBP9.85□□□□□ -0.83
TRIM28-214ENST00000600840 IFIH1Q9BYX4 1025 aaKnown RBP9.85□□□□□ -0.83
TRIM28-214ENST00000600840 SMARCAD1Q9H4L7 1026 aa9.85□□□□□ -0.83
TRIM28-214ENST00000600840 AGO3Q9H9G7 860 aaKnown RBP9.85□□□□□ -0.83
TRIM28-214ENST00000600840 JPH1Q9HDC5 661 aaPredicted RBP9.85□□□□□ -0.83
TRIM28-214ENST00000600840 ALG13Q9NP73 1137 aaKnown RBP9.85□□□□□ -0.83
TRIM28-214ENST00000600840 ERAP1Q9NZ08 941 aa9.85□□□□□ -0.83
TRIM28-214ENST00000600840 TFIP11Q9UBB9 837 aaKnown RBP9.85□□□□□ -0.83
TRIM28-214ENST00000600840 SLC9A2Q9UBY0 812 aa9.85□□□□□ -0.83
TRIM28-214ENST00000600840 DDX25Q9UHL0 483 aaKnown RBP9.85□□□□□ -0.83
TRIM28-214ENST00000600840 TUBE1Q9UJT0 475 aa9.85□□□□□ -0.83
TRIM28-214ENST00000600840 RCOR1Q9UKL0 485 aa9.85□□□□□ -0.83
TRIM28-214ENST00000600840 INSL6Q9Y581 213 aa9.85□□□□□ -0.83
TRIM28-214ENST00000600840 CDY2AQ9Y6F7 541 aa9.85□□□□□ -0.83
TRIM28-214ENST00000600840 NFASCO94856 1347 aa9.84□□□□□ -0.83
TRIM28-214ENST00000600840 TTC3P53804 2025 aa9.84□□□□□ -0.83
TRIM28-214ENST00000600840 TMEM221A6NGB7 291 aa9.84□□□□□ -0.83
TRIM28-214ENST00000600840 M0R296 226 aa9.84□□□□□ -0.83
TRIM28-214ENST00000600840 ENPP3O14638 875 aa9.84□□□□□ -0.83
TRIM28-214ENST00000600840 ATG7O95352 703 aa9.84□□□□□ -0.83
TRIM28-214ENST00000600840 ATP2B1P20020 1258 aa9.84□□□□□ -0.83
TRIM28-214ENST00000600840 ATP4AP20648 1035 aa9.84□□□□□ -0.83
TRIM28-214ENST00000600840 MCM7P33993 719 aa9.84□□□□□ -0.83
TRIM28-214ENST00000600840 ATP2C1P98194 919 aaPredicted RBP9.84□□□□□ -0.83
TRIM28-214ENST00000600840 DNM1Q05193 864 aaKnown RBP9.84□□□□□ -0.83
TRIM28-214ENST00000600840 TMEM62Q0P6H9 643 aa9.84□□□□□ -0.83
TRIM28-214ENST00000600840 PTGDRQ13258 359 aa9.84□□□□□ -0.83
TRIM28-214ENST00000600840 SLC39A14Q15043 492 aa9.84□□□□□ -0.83
TRIM28-214ENST00000600840 SF3A1Q15459 793 aaKnown RBP9.84□□□□□ -0.83
TRIM28-214ENST00000600840 EPC2Q52LR7 807 aa9.84□□□□□ -0.83
TRIM28-214ENST00000600840 TIGD5Q53EQ6 642 aa9.84□□□□□ -0.83
TRIM28-214ENST00000600840 FBXO47Q5MNV8 452 aa9.84□□□□□ -0.83
TRIM28-214ENST00000600840 ATL3Q6DD88 541 aa9.84□□□□□ -0.83
TRIM28-214ENST00000600840 RPAINQ86UA6 219 aa9.84□□□□□ -0.83
TRIM28-214ENST00000600840 POTEDQ86YR6 584 aa9.84□□□□□ -0.83
TRIM28-214ENST00000600840 EDAQ92838 391 aa9.84□□□□□ -0.83
TRIM28-214ENST00000600840 PBXIP1Q96AQ6 731 aa9.84□□□□□ -0.83
TRIM28-214ENST00000600840 FAM20AQ96MK3 541 aa9.84□□□□□ -0.83
TRIM28-214ENST00000600840 RIT2Q99578 217 aa9.84□□□□□ -0.83
TRIM28-214ENST00000600840 FAM49AQ9H0Q0 323 aaPredicted RBP9.84□□□□□ -0.83
TRIM28-214ENST00000600840 VAV3Q9UKW4 847 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms