RNA–Protein interactions for RNA: ENST00000600778.3

SOX2-OT-233, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 762 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-233ENST00000600778 STAG3L1P0CL83 205 aa13.05□□□□□ -0.32
SOX2-OT-233ENST00000600778 TMOD1P28289 359 aa13.05□□□□□ -0.32
SOX2-OT-233ENST00000600778 BMPR1AP36894 532 aa13.05□□□□□ -0.32
SOX2-OT-233ENST00000600778 NEK4P51957 841 aa13.05□□□□□ -0.32
SOX2-OT-233ENST00000600778 CRYBB1P53674 252 aaPredicted RBP13.05□□□□□ -0.32
SOX2-OT-233ENST00000600778 PAN2Q504Q3 1202 aaKnown RBP13.05□□□□□ -0.32
SOX2-OT-233ENST00000600778 ODR4Q5SWX8 454 aa13.05□□□□□ -0.32
SOX2-OT-233ENST00000600778 MOXD1Q6UVY6 613 aa13.05□□□□□ -0.32
SOX2-OT-233ENST00000600778 CRIPAKQ8N1N5 446 aa13.05□□□□□ -0.32
SOX2-OT-233ENST00000600778 ETNPPLQ8TBG4 499 aa13.05□□□□□ -0.32
SOX2-OT-233ENST00000600778 CLP1Q92989 425 aaKnown RBP13.05□□□□□ -0.32
SOX2-OT-233ENST00000600778 MBOAT7Q96N66 472 aa13.05□□□□□ -0.32
SOX2-OT-233ENST00000600778 NECAB3Q96P71 396 aaPredicted RBP13.05□□□□□ -0.32
SOX2-OT-233ENST00000600778 ORC3Q9UBD5 711 aaPredicted RBP13.05□□□□□ -0.32
SOX2-OT-233ENST00000600778 DDX25Q9UHL0 483 aaKnown RBP13.05□□□□□ -0.32
SOX2-OT-233ENST00000600778 LRFN2Q9ULH4 789 aa13.05□□□□□ -0.32
SOX2-OT-233ENST00000600778 RWDD3Q9Y3V2 267 aa13.05□□□□□ -0.32
SOX2-OT-233ENST00000600778 TCF20Q9UGU0 1960 aaKnown RBP13.05□□□□□ -0.32
SOX2-OT-233ENST00000600778 NLRC5Q86WI3 1866 aa13.04□□□□□ -0.32
SOX2-OT-233ENST00000600778 C5orf67F2Z3F1 127 aa13.04□□□□□ -0.32
SOX2-OT-233ENST00000600778 SLC37A4O43826 429 aa13.04□□□□□ -0.32
SOX2-OT-233ENST00000600778 LARGE1O95461 756 aa13.04□□□□□ -0.32
SOX2-OT-233ENST00000600778 SARSP49591 514 aaKnown RBP13.04□□□□□ -0.32
SOX2-OT-233ENST00000600778 RBM25P49756 843 aaKnown RBP13.04□□□□□ -0.32
SOX2-OT-233ENST00000600778 GATMP50440 423 aa13.04□□□□□ -0.32
SOX2-OT-233ENST00000600778 NLRP11P59045 1033 aaKnown RBP13.04□□□□□ -0.32
SOX2-OT-233ENST00000600778 ME3Q16798 604 aa13.04□□□□□ -0.32
SOX2-OT-233ENST00000600778 FAM228AQ86W67 206 aa13.04□□□□□ -0.32
SOX2-OT-233ENST00000600778 BANK1Q8NDB2 785 aa13.04□□□□□ -0.32
SOX2-OT-233ENST00000600778 RDM1Q8NG50 284 aa13.04□□□□□ -0.32
SOX2-OT-233ENST00000600778 OXER1Q8TDS5 423 aa13.04□□□□□ -0.32
SOX2-OT-233ENST00000600778 ZNF668Q96K58 619 aaPredicted RBP13.04□□□□□ -0.32
SOX2-OT-233ENST00000600778 MAP7D2Q96T17 732 aa13.04□□□□□ -0.32
SOX2-OT-233ENST00000600778 ADAM2Q99965 735 aa13.04□□□□□ -0.32
SOX2-OT-233ENST00000600778 UBE2ZQ9H832 354 aaPredicted RBP13.04□□□□□ -0.32
SOX2-OT-233ENST00000600778 RGS18Q9NS28 235 aa13.04□□□□□ -0.32
SOX2-OT-233ENST00000600778 PCDHB7Q9Y5E2 793 aa13.04□□□□□ -0.32
SOX2-OT-233ENST00000600778 TTC3P53804 2025 aa13.04□□□□□ -0.32
SOX2-OT-233ENST00000600778 RALGAPA2Q2PPJ7 1873 aa13.04□□□□□ -0.32
SOX2-OT-233ENST00000600778 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.03□□□□□ -0.32
SOX2-OT-233ENST00000600778 GRM6O15303 877 aa13.03□□□□□ -0.32
SOX2-OT-233ENST00000600778 CCNT1O60563 726 aaKnown RBP13.03□□□□□ -0.32
SOX2-OT-233ENST00000600778 CSPG5O95196 566 aa13.03□□□□□ -0.32
SOX2-OT-233ENST00000600778 FDPSP14324 419 aaKnown RBP13.03□□□□□ -0.32
SOX2-OT-233ENST00000600778 TBC1D8BQ0IIM8 1120 aa13.03□□□□□ -0.32
SOX2-OT-233ENST00000600778 MTERF2Q49AM1 385 aa13.03□□□□□ -0.32
SOX2-OT-233ENST00000600778 TIGD5Q53EQ6 642 aa13.03□□□□□ -0.32
SOX2-OT-233ENST00000600778 TCEAL5Q5H9L2 206 aa13.03□□□□□ -0.32
SOX2-OT-233ENST00000600778 B3GNT9Q6UX72 402 aa13.03□□□□□ -0.32
SOX2-OT-233ENST00000600778 PIK3AP1Q6ZUJ8 805 aa13.03□□□□□ -0.32
SOX2-OT-233ENST00000600778 NEK8Q86SG6 692 aa13.03□□□□□ -0.32
SOX2-OT-233ENST00000600778 CMTR2Q8IYT2 770 aaKnown RBP13.03□□□□□ -0.32
SOX2-OT-233ENST00000600778 LINC01465Q8N7H1 131 aa13.03□□□□□ -0.32
SOX2-OT-233ENST00000600778 WASF1Q92558 559 aa13.03□□□□□ -0.32
SOX2-OT-233ENST00000600778 GTF3C6Q969F1 213 aa13.03□□□□□ -0.32
SOX2-OT-233ENST00000600778 KIF2CQ99661 725 aa13.03□□□□□ -0.32
SOX2-OT-233ENST00000600778 SH2D3AQ9BRG2 576 aa13.03□□□□□ -0.32
SOX2-OT-233ENST00000600778 C11orf84Q9BUA3 381 aaPredicted RBP13.03□□□□□ -0.32
SOX2-OT-233ENST00000600778 SEPT9Q9UHD8 586 aaPredicted RBP13.03□□□□□ -0.32
SOX2-OT-233ENST00000600778 MRPL42Q9Y6G3 142 aaKnown RBP13.03□□□□□ -0.32
SOX2-OT-233ENST00000600778 WDR81Q562E7 1941 aa13.02□□□□□ -0.32
SOX2-OT-233ENST00000600778 TMEM150BA6NC51 233 aa13.02□□□□□ -0.33
SOX2-OT-233ENST00000600778 DDX11L8A8MPP1 907 aa13.02□□□□□ -0.33
SOX2-OT-233ENST00000600778 MARCH6O60337 910 aa13.02□□□□□ -0.33
SOX2-OT-233ENST00000600778 KCNA5P22460 613 aa13.02□□□□□ -0.33
SOX2-OT-233ENST00000600778 TARBP2Q15633 366 aaKnown RBP13.02□□□□□ -0.33
SOX2-OT-233ENST00000600778 XKR3Q5GH77 459 aa13.02□□□□□ -0.33
SOX2-OT-233ENST00000600778 EARS2Q5JPH6 523 aaKnown RBP13.02□□□□□ -0.33
SOX2-OT-233ENST00000600778 FAM102BQ5T8I3 360 aa13.02□□□□□ -0.33
SOX2-OT-233ENST00000600778 PPP4R3AQ6IN85 833 aa13.02□□□□□ -0.33
SOX2-OT-233ENST00000600778 EP400NLQ6ZTU2 488 aa13.02□□□□□ -0.33
SOX2-OT-233ENST00000600778 SLC24A5Q71RS6 500 aa13.02□□□□□ -0.33
SOX2-OT-233ENST00000600778 NIFKQ9BYG3 293 aaKnown RBP13.02□□□□□ -0.33
SOX2-OT-233ENST00000600778 ADAMTS10Q9H324 1103 aa13.02□□□□□ -0.33
SOX2-OT-233ENST00000600778 NSUN3Q9H649 340 aaKnown RBP13.02□□□□□ -0.33
SOX2-OT-233ENST00000600778 UPF2Q9HAU5 1272 aaKnown RBP13.02□□□□□ -0.33
SOX2-OT-233ENST00000600778 ALG13Q9NP73 1137 aaKnown RBP13.02□□□□□ -0.33
SOX2-OT-233ENST00000600778 C1orf112Q9NSG2 853 aa13.02□□□□□ -0.33
SOX2-OT-233ENST00000600778 C9IYK1 514 aa13.01□□□□□ -0.33
SOX2-OT-233ENST00000600778 EML1O00423 815 aa13.01□□□□□ -0.33
SOX2-OT-233ENST00000600778 STBD1O95210 358 aa13.01□□□□□ -0.33
SOX2-OT-233ENST00000600778 GCFC2P16383 781 aaKnown RBP13.01□□□□□ -0.33
SOX2-OT-233ENST00000600778 EIF4BP23588 611 aaKnown RBP13.01□□□□□ -0.33
SOX2-OT-233ENST00000600778 KRT2P35908 639 aa13.01□□□□□ -0.33
SOX2-OT-233ENST00000600778 GPC3P51654 580 aa13.01□□□□□ -0.33
SOX2-OT-233ENST00000600778 FOSBP53539 338 aa13.01□□□□□ -0.33
SOX2-OT-233ENST00000600778 NR5A1Q13285 461 aa13.01□□□□□ -0.33
SOX2-OT-233ENST00000600778 DRP2Q13474 957 aa13.01□□□□□ -0.33
SOX2-OT-233ENST00000600778 SPOUT1Q5T280 376 aaKnown RBP13.01□□□□□ -0.33
SOX2-OT-233ENST00000600778 FAM43BQ6ZT52 329 aaPredicted RBP13.01□□□□□ -0.33
SOX2-OT-233ENST00000600778 NSUN7Q8NE18 718 aaKnown RBP13.01□□□□□ -0.33
SOX2-OT-233ENST00000600778 NLRP7Q8WX94 980 aa13.01□□□□□ -0.33
SOX2-OT-233ENST00000600778 FAM20AQ96MK3 541 aa13.01□□□□□ -0.33
SOX2-OT-233ENST00000600778 SCLT1Q96NL6 688 aa13.01□□□□□ -0.33
SOX2-OT-233ENST00000600778 NAP1L4Q99733 375 aaKnown RBP13.01□□□□□ -0.33
SOX2-OT-233ENST00000600778 PLVAPQ9BX97 442 aa13.01□□□□□ -0.33
SOX2-OT-233ENST00000600778 BACH2Q9BYV9 841 aa13.01□□□□□ -0.33
SOX2-OT-233ENST00000600778 LMAN2LQ9H0V9 348 aa13.01□□□□□ -0.33
SOX2-OT-233ENST00000600778 KCNMB3Q9NPA1 279 aa13.01□□□□□ -0.33
SOX2-OT-233ENST00000600778 PLAGL2Q9UPG8 496 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms