RNA–Protein interactions for RNA: ENST00000600552.5

SHKBP1-223, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-223ENST00000600552 PPP2R3CQ969Q6 453 aa19.88■□□□□ 0.77
SHKBP1-223ENST00000600552 SCLT1Q96NL6 688 aa19.88■□□□□ 0.77
SHKBP1-223ENST00000600552 C11orf16Q9NQ32 467 aa19.88■□□□□ 0.77
SHKBP1-223ENST00000600552 DISC1Q9NRI5 854 aa19.88■□□□□ 0.77
SHKBP1-223ENST00000600552 RGS18Q9NS28 235 aa19.88■□□□□ 0.77
SHKBP1-223ENST00000600552 NRBP2Q9NSY0 501 aa19.88■□□□□ 0.77
SHKBP1-223ENST00000600552 HCSTQ9UBK5 93 aa19.88■□□□□ 0.77
SHKBP1-223ENST00000600552 HCN4Q9Y3Q4 1203 aa19.88■□□□□ 0.77
SHKBP1-223ENST00000600552 PCDHB12Q9Y5F1 795 aa19.88■□□□□ 0.77
SHKBP1-223ENST00000600552 WDR64B1ANS9 1081 aa19.87■□□□□ 0.77
SHKBP1-223ENST00000600552 CPLX1O14810 134 aa19.87■□□□□ 0.77
SHKBP1-223ENST00000600552 GAS7O60861 476 aa19.87■□□□□ 0.77
SHKBP1-223ENST00000600552 FGFR1P11362 822 aa19.87■□□□□ 0.77
SHKBP1-223ENST00000600552 NRIP1P48552 1158 aa19.87■□□□□ 0.77
SHKBP1-223ENST00000600552 SLC24A5Q71RS6 500 aa19.87■□□□□ 0.77
SHKBP1-223ENST00000600552 RUFY3Q7L099 469 aa19.87■□□□□ 0.77
SHKBP1-223ENST00000600552 RNF169Q8NCN4 708 aa19.87■□□□□ 0.77
SHKBP1-223ENST00000600552 P2RX5Q93086 422 aa19.87■□□□□ 0.77
SHKBP1-223ENST00000600552 MAP7D2Q96T17 732 aa19.87■□□□□ 0.77
SHKBP1-223ENST00000600552 ATP6V0A4Q9HBG4 840 aa19.87■□□□□ 0.77
SHKBP1-223ENST00000600552 C1orf112Q9NSG2 853 aa19.87■□□□□ 0.77
SHKBP1-223ENST00000600552 CEP131Q9UPN4 1083 aa19.87■□□□□ 0.77
SHKBP1-223ENST00000600552 CYP46A1Q9Y6A2 500 aa19.87■□□□□ 0.77
SHKBP1-223ENST00000600552 GPR37L1O60883 481 aa19.86■□□□□ 0.77
SHKBP1-223ENST00000600552 TBX10O75333 385 aa19.86■□□□□ 0.77
SHKBP1-223ENST00000600552 GPR32O75388 356 aa19.86■□□□□ 0.77
SHKBP1-223ENST00000600552 TMOD1P28289 359 aa19.86■□□□□ 0.77
SHKBP1-223ENST00000600552 CIITAP33076 1130 aa19.86■□□□□ 0.77
SHKBP1-223ENST00000600552 ZP2Q05996 745 aa19.86■□□□□ 0.77
SHKBP1-223ENST00000600552 CSPP1Q1MSJ5 1256 aa19.86■□□□□ 0.77
SHKBP1-223ENST00000600552 CTC1Q2NKJ3 1217 aa19.86■□□□□ 0.77
SHKBP1-223ENST00000600552 LRCH2Q5VUJ6 765 aa19.86■□□□□ 0.77
SHKBP1-223ENST00000600552 THNSL1Q8IYQ7 743 aa19.86■□□□□ 0.77
SHKBP1-223ENST00000600552 TBCKQ8TEA7 893 aa19.86■□□□□ 0.77
SHKBP1-223ENST00000600552 LENG9Q96B70 501 aa19.86■□□□□ 0.77
SHKBP1-223ENST00000600552 FAM167AQ96KS9 214 aa19.86■□□□□ 0.77
SHKBP1-223ENST00000600552 TEKT3Q9BXF9 490 aa19.86■□□□□ 0.77
SHKBP1-223ENST00000600552 AAASQ9NRG9 546 aa19.86■□□□□ 0.77
SHKBP1-223ENST00000600552 TYW1Q9NV66 732 aaKnown RBP19.86■□□□□ 0.77
SHKBP1-223ENST00000600552 CD207Q9UJ71 328 aa19.86■□□□□ 0.77
SHKBP1-223ENST00000600552 NID2Q14112 1375 aa19.85■□□□□ 0.77
SHKBP1-223ENST00000600552 C9IYK1 514 aa19.85■□□□□ 0.77
SHKBP1-223ENST00000600552 MAGEB2O15479 319 aa19.85■□□□□ 0.77
SHKBP1-223ENST00000600552 MBTPS2O43462 519 aa19.85■□□□□ 0.77
SHKBP1-223ENST00000600552 OATP04181 439 aa19.85■□□□□ 0.77
SHKBP1-223ENST00000600552 ALADP13716 330 aa19.85■□□□□ 0.77
SHKBP1-223ENST00000600552 PLA2G5P39877 138 aa19.85■□□□□ 0.77
SHKBP1-223ENST00000600552 PRKCEQ02156 737 aa19.85■□□□□ 0.77
SHKBP1-223ENST00000600552 ADAM15Q13444 863 aa19.85■□□□□ 0.77
SHKBP1-223ENST00000600552 TOB2Q14106 344 aaPredicted RBP19.85■□□□□ 0.77
SHKBP1-223ENST00000600552 COL19A1Q14993 1142 aa19.85■□□□□ 0.77
SHKBP1-223ENST00000600552 UGCGQ16739 394 aa19.85■□□□□ 0.77
SHKBP1-223ENST00000600552 NAALADL2Q58DX5 795 aa19.85■□□□□ 0.77
SHKBP1-223ENST00000600552 AGXT2Q9BYV1 514 aa19.85■□□□□ 0.77
SHKBP1-223ENST00000600552 UPF3BQ9BZI7 483 aaKnown RBP19.85■□□□□ 0.77
SHKBP1-223ENST00000600552 UNC45AQ9H3U1 944 aa19.85■□□□□ 0.77
SHKBP1-223ENST00000600552 TLE6Q9H808 572 aa19.85■□□□□ 0.77
SHKBP1-223ENST00000600552 RNF216Q9NWF9 866 aaPredicted RBP19.85■□□□□ 0.77
SHKBP1-223ENST00000600552 WDR81Q562E7 1941 aa19.84■□□□□ 0.77
SHKBP1-223ENST00000600552 FNDC1Q4ZHG4 1894 aaPredicted RBP19.84■□□□□ 0.77
SHKBP1-223ENST00000600552 PER2O15055 1255 aa19.84■□□□□ 0.77
SHKBP1-223ENST00000600552 EDIL3O43854 480 aa19.84■□□□□ 0.77
SHKBP1-223ENST00000600552 ZNF862O60290 1169 aa19.84■□□□□ 0.77
SHKBP1-223ENST00000600552 DTNBO60941 627 aa19.84■□□□□ 0.77
SHKBP1-223ENST00000600552 ZSCAN20P17040 1043 aaPredicted RBP19.84■□□□□ 0.77
SHKBP1-223ENST00000600552 FGFR4P22455 802 aa19.84■□□□□ 0.77
SHKBP1-223ENST00000600552 USP11P51784 963 aa19.84■□□□□ 0.77
SHKBP1-223ENST00000600552 MIER3Q7Z3K6 550 aa19.84■□□□□ 0.77
SHKBP1-223ENST00000600552 ADHFE1Q8IWW8 467 aa19.84■□□□□ 0.77
SHKBP1-223ENST00000600552 AIFM3Q96NN9 605 aa19.84■□□□□ 0.77
SHKBP1-223ENST00000600552 SH2D3AQ9BRG2 576 aa19.84■□□□□ 0.77
SHKBP1-223ENST00000600552 PCDHA4Q9UN74 947 aa19.84■□□□□ 0.77
SHKBP1-223ENST00000600552 PLXNA4Q9HCM2 1894 aa19.84■□□□□ 0.77
SHKBP1-223ENST00000600552 DCXO43602 365 aa19.83■□□□□ 0.77
SHKBP1-223ENST00000600552 CSDE1O75534 798 aaKnown RBP19.83■□□□□ 0.77
SHKBP1-223ENST00000600552 TDP2O95551 362 aa19.83■□□□□ 0.77
SHKBP1-223ENST00000600552 TBC1D8BQ0IIM8 1120 aa19.83■□□□□ 0.77
SHKBP1-223ENST00000600552 MTERF2Q49AM1 385 aa19.83■□□□□ 0.77
SHKBP1-223ENST00000600552 FBXL16Q8N461 479 aa19.83■□□□□ 0.77
SHKBP1-223ENST00000600552 COLGALT1Q8NBJ5 622 aa19.83■□□□□ 0.77
SHKBP1-223ENST00000600552 NLRP7Q8WX94 980 aa19.83■□□□□ 0.77
SHKBP1-223ENST00000600552 SLC5A5Q92911 643 aa19.83■□□□□ 0.77
SHKBP1-223ENST00000600552 ZSWIM6Q9HCJ5 1215 aa19.83■□□□□ 0.77
SHKBP1-223ENST00000600552 SH3GLB2Q9NR46 395 aa19.83■□□□□ 0.77
SHKBP1-223ENST00000600552 PRKAG3Q9UGI9 489 aa19.83■□□□□ 0.77
SHKBP1-223ENST00000600552 SEPT9Q9UHD8 586 aaPredicted RBP19.83■□□□□ 0.77
SHKBP1-223ENST00000600552 BARX2Q9UMQ3 279 aaPredicted RBP19.83■□□□□ 0.77
SHKBP1-223ENST00000600552 TMEM150BA6NC51 233 aa19.82■□□□□ 0.76
SHKBP1-223ENST00000600552 FGF18O76093 207 aa19.82■□□□□ 0.76
SHKBP1-223ENST00000600552 JAK3P52333 1124 aa19.82■□□□□ 0.76
SHKBP1-223ENST00000600552 SMAD4Q13485 552 aaKnown RBP19.82■□□□□ 0.76
SHKBP1-223ENST00000600552 DSC3Q14574 896 aa19.82■□□□□ 0.76
SHKBP1-223ENST00000600552 SMAD2Q15796 467 aaKnown RBP19.82■□□□□ 0.76
SHKBP1-223ENST00000600552 ABI1Q8IZP0 508 aa19.82■□□□□ 0.76
SHKBP1-223ENST00000600552 BLIDQ8IZY5 108 aa19.82■□□□□ 0.76
SHKBP1-223ENST00000600552 RIT2Q99578 217 aa19.82■□□□□ 0.76
SHKBP1-223ENST00000600552 ADAMTS10Q9H324 1103 aa19.82■□□□□ 0.76
SHKBP1-223ENST00000600552 PDRG1Q9NUG6 133 aa19.82■□□□□ 0.76
SHKBP1-223ENST00000600552 TMEM161AQ9NX61 479 aa19.82■□□□□ 0.76
SHKBP1-223ENST00000600552 DDX11L8A8MPP1 907 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms