RNA–Protein interactions for RNA: ENST00000600440.5

SYDE1-204, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SYDE1, Length 3,058 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-204ENST00000600440 EIF1ADQ8N9N8 165 aaKnown RBP17.41■□□□□ 0.38
SYDE1-204ENST00000600440 PNMA1Q8ND90 353 aa17.41■□□□□ 0.38
SYDE1-204ENST00000600440 PGM2Q96G03 612 aa17.41■□□□□ 0.38
SYDE1-204ENST00000600440 TGS1Q96RS0 853 aaKnown RBP17.41■□□□□ 0.38
SYDE1-204ENST00000600440 MTA3Q9BTC8 594 aa17.41■□□□□ 0.38
SYDE1-204ENST00000600440 BLOC1S4Q9NUP1 217 aa17.41■□□□□ 0.38
SYDE1-204ENST00000600440 PPP1R9AQ9ULJ8 1098 aa17.41■□□□□ 0.38
SYDE1-204ENST00000600440 AGTP01019 485 aa17.41■□□□□ 0.38
SYDE1-204ENST00000600440 KCNH2Q12809 1159 aa17.41■□□□□ 0.38
SYDE1-204ENST00000600440 GRB10Q13322 594 aa17.41■□□□□ 0.38
SYDE1-204ENST00000600440 KIAA1755Q5JYT7 1200 aa17.41■□□□□ 0.38
SYDE1-204ENST00000600440 EXOC3L1Q86VI1 746 aa17.41■□□□□ 0.38
SYDE1-204ENST00000600440 MFN1Q8IWA4 741 aa17.41■□□□□ 0.38
SYDE1-204ENST00000600440 SUPT20HQ8NEM7 779 aa17.41■□□□□ 0.38
SYDE1-204ENST00000600440 ERP27Q96DN0 273 aa17.41■□□□□ 0.38
SYDE1-204ENST00000600440 UBA5Q9GZZ9 404 aa17.41■□□□□ 0.38
SYDE1-204ENST00000600440 METTL5Q9NRN9 209 aaKnown RBP17.41■□□□□ 0.38
SYDE1-204ENST00000600440 TMEM94Q12767 1356 aa17.41■□□□□ 0.38
SYDE1-204ENST00000600440 NPHP3-ACAD11A0A0J9YXS1 232 aa17.41■□□□□ 0.38
SYDE1-204ENST00000600440 KLC1Q07866 573 aa17.41■□□□□ 0.38
SYDE1-204ENST00000600440 THEMISQ8N1K5 641 aaPredicted RBP17.41■□□□□ 0.38
SYDE1-204ENST00000600440 LMTK3Q96Q04 1460 aa17.4■□□□□ 0.38
SYDE1-204ENST00000600440 FLOT1O75955 427 aa17.4■□□□□ 0.38
SYDE1-204ENST00000600440 GFPT2O94808 682 aa17.4■□□□□ 0.38
SYDE1-204ENST00000600440 AUHQ13825 339 aaKnown RBP17.4■□□□□ 0.38
SYDE1-204ENST00000600440 PDCD2Q16342 344 aaPredicted RBP17.4■□□□□ 0.38
SYDE1-204ENST00000600440 TBCKQ8TEA7 893 aa17.4■□□□□ 0.38
SYDE1-204ENST00000600440 SPIRE2Q8WWL2 714 aa17.4■□□□□ 0.38
SYDE1-204ENST00000600440 TMEM260Q9NX78 707 aa17.4■□□□□ 0.38
SYDE1-204ENST00000600440 ASAP1Q9ULH1 1129 aa17.4■□□□□ 0.38
SYDE1-204ENST00000600440 BAZ2AQ9UIF9 1905 aaKnown RBP17.4■□□□□ 0.38
SYDE1-204ENST00000600440 TFAP4Q01664 338 aa17.4■□□□□ 0.38
SYDE1-204ENST00000600440 NT5DC3Q86UY8 548 aa17.4■□□□□ 0.38
SYDE1-204ENST00000600440 GBP7Q8N8V2 638 aaPredicted RBP17.4■□□□□ 0.38
SYDE1-204ENST00000600440 UTP4Q969X6 686 aaKnown RBP17.4■□□□□ 0.38
SYDE1-204ENST00000600440 MTRF1LQ9UGC7 380 aaKnown RBP17.4■□□□□ 0.38
SYDE1-204ENST00000600440 RPTORQ8N122 1335 aa17.4■□□□□ 0.38
SYDE1-204ENST00000600440 KCNJ1P48048 391 aa17.39■□□□□ 0.38
SYDE1-204ENST00000600440 NONOQ15233 471 aaKnown RBP eCLIP17.39■□□□□ 0.38
SYDE1-204ENST00000600440 TSNAXIP1Q2TAA8 658 aa17.39■□□□□ 0.38
SYDE1-204ENST00000600440 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.39■□□□□ 0.38
SYDE1-204ENST00000600440 EDEM3Q9BZQ6 932 aa17.39■□□□□ 0.38
SYDE1-204ENST00000600440 RNPEPL1Q9HAU8 725 aa17.39■□□□□ 0.38
SYDE1-204ENST00000600440 RXFP1Q9HBX9 757 aa17.39■□□□□ 0.38
SYDE1-204ENST00000600440 PARP4Q9UKK3 1724 aaKnown RBP17.39■□□□□ 0.37
SYDE1-204ENST00000600440 USP17L3A6NCW0 530 aa17.39■□□□□ 0.37
SYDE1-204ENST00000600440 USP17L4A6NCW7 530 aa17.39■□□□□ 0.37
SYDE1-204ENST00000600440 LIN7AO14910 233 aaPredicted RBP17.39■□□□□ 0.37
SYDE1-204ENST00000600440 KRT18P05783 430 aaKnown RBP17.39■□□□□ 0.37
SYDE1-204ENST00000600440 FGFR2P21802 821 aa17.39■□□□□ 0.37
SYDE1-204ENST00000600440 EPHB2P29323 1055 aa17.39■□□□□ 0.37
SYDE1-204ENST00000600440 RPL21P46778 160 aaKnown RBP17.39■□□□□ 0.37
SYDE1-204ENST00000600440 KLRC3Q07444 240 aa17.39■□□□□ 0.37
SYDE1-204ENST00000600440 TBC1D25Q3MII6 688 aa17.39■□□□□ 0.37
SYDE1-204ENST00000600440 GALNTL6Q49A17 601 aa17.39■□□□□ 0.37
SYDE1-204ENST00000600440 FAM26FQ5R3K3 315 aa17.39■□□□□ 0.37
SYDE1-204ENST00000600440 USP17L1Q7RTZ2 530 aa17.39■□□□□ 0.37
SYDE1-204ENST00000600440 SH3RF3Q8TEJ3 882 aaPredicted RBP17.39■□□□□ 0.37
SYDE1-204ENST00000600440 PIGOQ8TEQ8 1089 aa17.39■□□□□ 0.37
SYDE1-204ENST00000600440 DNAJC9Q8WXX5 260 aa17.39■□□□□ 0.37
SYDE1-204ENST00000600440 RAB3IPQ96QF0 476 aaPredicted RBP17.39■□□□□ 0.37
SYDE1-204ENST00000600440 MAGEF1Q9HAY2 307 aa17.39■□□□□ 0.37
SYDE1-204ENST00000600440 ZDHHC18Q9NUE0 388 aa17.39■□□□□ 0.37
SYDE1-204ENST00000600440 TJP1Q07157 1748 aa17.39■□□□□ 0.37
SYDE1-204ENST00000600440 SMCO2A6NFE2 343 aa17.39■□□□□ 0.37
SYDE1-204ENST00000600440 GM2AP17900 193 aa17.39■□□□□ 0.37
SYDE1-204ENST00000600440 CALB2P22676 271 aa17.39■□□□□ 0.37
SYDE1-204ENST00000600440 PTDSS1P48651 473 aaKnown RBP17.39■□□□□ 0.37
SYDE1-204ENST00000600440 GALCP54803 685 aa17.39■□□□□ 0.37
SYDE1-204ENST00000600440 RCN2Q14257 317 aa17.39■□□□□ 0.37
SYDE1-204ENST00000600440 HERC4Q5GLZ8 1057 aaPredicted RBP17.39■□□□□ 0.37
SYDE1-204ENST00000600440 ITFG2Q969R8 447 aa17.39■□□□□ 0.37
SYDE1-204ENST00000600440 ARMCX3Q9UH62 379 aaPredicted RBP17.39■□□□□ 0.37
SYDE1-204ENST00000600440 NUDT17P0C025 328 aa17.38■□□□□ 0.37
SYDE1-204ENST00000600440 MRPS35P82673 323 aaKnown RBP17.38■□□□□ 0.37
SYDE1-204ENST00000600440 MGAT5Q09328 741 aa17.38■□□□□ 0.37
SYDE1-204ENST00000600440 COASYQ13057 564 aa17.38■□□□□ 0.37
SYDE1-204ENST00000600440 PLS1Q14651 629 aa17.38■□□□□ 0.37
SYDE1-204ENST00000600440 DUPD1Q68J44 220 aa17.38■□□□□ 0.37
SYDE1-204ENST00000600440 ZC3H18Q86VM9 953 aaKnown RBP17.38■□□□□ 0.37
SYDE1-204ENST00000600440 GLYCTKQ8IVS8 523 aa17.38■□□□□ 0.37
SYDE1-204ENST00000600440 TEX9Q8N6V9 391 aa17.38■□□□□ 0.37
SYDE1-204ENST00000600440 AK8Q96MA6 479 aa17.38■□□□□ 0.37
SYDE1-204ENST00000600440 ADAM33Q9BZ11 813 aa17.38■□□□□ 0.37
SYDE1-204ENST00000600440 INTUQ9ULD6 942 aa17.38■□□□□ 0.37
SYDE1-204ENST00000600440 PDE8AO60658 829 aa17.38■□□□□ 0.37
SYDE1-204ENST00000600440 UCHL3P15374 230 aa17.38■□□□□ 0.37
SYDE1-204ENST00000600440 SP100P23497 879 aaPredicted RBP17.38■□□□□ 0.37
SYDE1-204ENST00000600440 DCAF12L1Q5VU92 463 aa17.38■□□□□ 0.37
SYDE1-204ENST00000600440 ZDHHC24Q6UX98 284 aa17.38■□□□□ 0.37
SYDE1-204ENST00000600440 IRF2BP2Q7Z5L9 587 aa17.38■□□□□ 0.37
SYDE1-204ENST00000600440 NEK8Q86SG6 692 aa17.38■□□□□ 0.37
SYDE1-204ENST00000600440 VPS36Q86VN1 386 aa17.38■□□□□ 0.37
SYDE1-204ENST00000600440 ECHDC2Q86YB7 292 aa17.38■□□□□ 0.37
SYDE1-204ENST00000600440 SRRM1Q8IYB3 904 aaKnown RBP17.38■□□□□ 0.37
SYDE1-204ENST00000600440 DYNLL2Q96FJ2 89 aa17.38■□□□□ 0.37
SYDE1-204ENST00000600440 PNMA5Q96PV4 448 aa17.38■□□□□ 0.37
SYDE1-204ENST00000600440 PLA2G12BQ9BX93 195 aa17.38■□□□□ 0.37
SYDE1-204ENST00000600440 MYLK2Q9H1R3 596 aa17.38■□□□□ 0.37
SYDE1-204ENST00000600440 RGL1Q9NZL6 768 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms