RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 TCTN1Q2MV58 587 aa15.35■□□□□ 0.05
VRK3-219ENST00000600137 XKR9Q5GH70 373 aa15.35■□□□□ 0.05
VRK3-219ENST00000600137 KRT79Q5XKE5 535 aa15.35■□□□□ 0.05
VRK3-219ENST00000600137 HAUS3Q68CZ6 603 aa15.35■□□□□ 0.05
VRK3-219ENST00000600137 LRRC8DQ7L1W4 858 aa15.35■□□□□ 0.05
VRK3-219ENST00000600137 OTUD6AQ7L8S5 288 aa15.35■□□□□ 0.05
VRK3-219ENST00000600137 NME8Q8N427 588 aa15.35■□□□□ 0.05
VRK3-219ENST00000600137 LRRC71Q8N4P6 559 aa15.35■□□□□ 0.05
VRK3-219ENST00000600137 KRI1Q8N9T8 703 aaKnown RBP15.35■□□□□ 0.05
VRK3-219ENST00000600137 FAM49AQ9H0Q0 323 aaPredicted RBP15.35■□□□□ 0.05
VRK3-219ENST00000600137 DDX19AQ9NUU7 478 aaKnown RBP15.35■□□□□ 0.05
VRK3-219ENST00000600137 CIZ1Q9ULV3 898 aaPredicted RBP15.35■□□□□ 0.05
VRK3-219ENST00000600137 PPME1Q9Y570 386 aa15.35■□□□□ 0.05
VRK3-219ENST00000600137 RSPH10B2B2RC85 870 aa15.34■□□□□ 0.05
VRK3-219ENST00000600137 GPR32O75388 356 aa15.34■□□□□ 0.05
VRK3-219ENST00000600137 RSPH10BP0C881 870 aa15.34■□□□□ 0.05
VRK3-219ENST00000600137 PRPF38BQ5VTL8 546 aaKnown RBP15.34■□□□□ 0.05
VRK3-219ENST00000600137 CABP7Q86V35 215 aa15.34■□□□□ 0.05
VRK3-219ENST00000600137 CCDC155Q8N6L0 562 aa15.34■□□□□ 0.05
VRK3-219ENST00000600137 RETREG2Q8NC44 543 aa15.34■□□□□ 0.05
VRK3-219ENST00000600137 ADAMTS10Q9H324 1103 aa15.34■□□□□ 0.05
VRK3-219ENST00000600137 IL23AQ9NPF7 189 aa15.34■□□□□ 0.05
VRK3-219ENST00000600137 BLOC1S4Q9NUP1 217 aa15.34■□□□□ 0.05
VRK3-219ENST00000600137 PCDHA7Q9UN72 937 aa15.34■□□□□ 0.05
VRK3-219ENST00000600137 KDM3AQ9Y4C1 1321 aa15.34■□□□□ 0.05
VRK3-219ENST00000600137 LAMA2P24043 3122 aaKnown RBP15.33■□□□□ 0.05
VRK3-219ENST00000600137 A0A087X0B3 334 aa15.33■□□□□ 0.04
VRK3-219ENST00000600137 SLC26A4O43511 780 aa15.33■□□□□ 0.04
VRK3-219ENST00000600137 EYA4O95677 639 aa15.33■□□□□ 0.04
VRK3-219ENST00000600137 CTSHP09668 335 aa15.33■□□□□ 0.04
VRK3-219ENST00000600137 ACRP10323 421 aa15.33■□□□□ 0.04
VRK3-219ENST00000600137 MRPS6P82932 125 aaKnown RBP15.33■□□□□ 0.04
VRK3-219ENST00000600137 FPGSQ05932 587 aa15.33■□□□□ 0.04
VRK3-219ENST00000600137 TMEM62Q0P6H9 643 aa15.33■□□□□ 0.04
VRK3-219ENST00000600137 TMEM240Q5SV17 173 aa15.33■□□□□ 0.04
VRK3-219ENST00000600137 SHC4Q6S5L8 630 aa15.33■□□□□ 0.04
VRK3-219ENST00000600137 TMEM199Q8N511 208 aa15.33■□□□□ 0.04
VRK3-219ENST00000600137 METTL13Q8N6R0 699 aa15.33■□□□□ 0.04
VRK3-219ENST00000600137 LEO1Q8WVC0 666 aaPredicted RBP15.33■□□□□ 0.04
VRK3-219ENST00000600137 SYMPKQ92797 1274 aaKnown RBP15.33■□□□□ 0.04
VRK3-219ENST00000600137 PLIN2Q99541 437 aa15.33■□□□□ 0.04
VRK3-219ENST00000600137 SUGCTQ9HAC7 445 aa15.33■□□□□ 0.04
VRK3-219ENST00000600137 CFAP45Q9UL16 551 aa15.33■□□□□ 0.04
VRK3-219ENST00000600137 CDY2AQ9Y6F7 541 aa15.33■□□□□ 0.04
VRK3-219ENST00000600137 CUTAO60888 179 aa15.32■□□□□ 0.04
VRK3-219ENST00000600137 VTNP04004 478 aa15.32■□□□□ 0.04
VRK3-219ENST00000600137 RFC2P35250 354 aa15.32■□□□□ 0.04
VRK3-219ENST00000600137 ARL2P36404 184 aa15.32■□□□□ 0.04
VRK3-219ENST00000600137 RFC5P40937 340 aa15.32■□□□□ 0.04
VRK3-219ENST00000600137 UBA7P41226 1012 aa15.32■□□□□ 0.04
VRK3-219ENST00000600137 KARSQ15046 597 aaKnown RBP15.32■□□□□ 0.04
VRK3-219ENST00000600137 NAALADL2Q58DX5 795 aa15.32■□□□□ 0.04
VRK3-219ENST00000600137 FBXO47Q5MNV8 452 aa15.32■□□□□ 0.04
VRK3-219ENST00000600137 C9orf50Q5SZB4 431 aa15.32■□□□□ 0.04
VRK3-219ENST00000600137 KCTD17Q8N5Z5 321 aa15.32■□□□□ 0.04
VRK3-219ENST00000600137 TMEM40Q8WWA1 233 aa15.32■□□□□ 0.04
VRK3-219ENST00000600137 LBHD1Q9BQE6 289 aaPredicted RBP15.32■□□□□ 0.04
VRK3-219ENST00000600137 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.32■□□□□ 0.048e-11■■■■□ 20.6
VRK3-219ENST00000600137 CELF4Q9BZC1 486 aaKnown RBP15.32■□□□□ 0.04
VRK3-219ENST00000600137 BHMT2Q9H2M3 363 aa15.32■□□□□ 0.04
VRK3-219ENST00000600137 AGO3Q9H9G7 860 aaKnown RBP15.32■□□□□ 0.04
VRK3-219ENST00000600137 DGAT1O75907 488 aa15.31■□□□□ 0.04
VRK3-219ENST00000600137 PARNO95453 639 aaKnown RBP15.31■□□□□ 0.04
VRK3-219ENST00000600137 RPLP2P05387 115 aaKnown RBP15.31■□□□□ 0.04
VRK3-219ENST00000600137 CYP11B2P19099 503 aa15.31■□□□□ 0.04
VRK3-219ENST00000600137 GPC3P51654 580 aa15.31■□□□□ 0.04
VRK3-219ENST00000600137 KRT85P78386 507 aa15.31■□□□□ 0.04
VRK3-219ENST00000600137 PPIGQ13427 754 aaKnown RBP eCLIP15.31■□□□□ 0.044e-6■□□□□ 8.2
VRK3-219ENST00000600137 LPIN1Q14693 890 aa15.31■□□□□ 0.04
VRK3-219ENST00000600137 EMC2Q15006 297 aa15.31■□□□□ 0.04
VRK3-219ENST00000600137 RASIP1Q5U651 963 aa15.31■□□□□ 0.04
VRK3-219ENST00000600137 PADI6Q6TGC4 694 aa15.31■□□□□ 0.04
VRK3-219ENST00000600137 CHRDL2Q6WN34 429 aa15.31■□□□□ 0.04
VRK3-219ENST00000600137 C1orf186Q6ZWK4 172 aa15.31■□□□□ 0.04
VRK3-219ENST00000600137 ZNF365Q70YC5 407 aa15.31■□□□□ 0.04
VRK3-219ENST00000600137 DEFB128Q7Z7B8 93 aa15.31■□□□□ 0.04
VRK3-219ENST00000600137 RSPH3Q86UC2 560 aa15.31■□□□□ 0.04
VRK3-219ENST00000600137 KSR1Q8IVT5 923 aa15.31■□□□□ 0.04
VRK3-219ENST00000600137 SYT2Q8N9I0 419 aaPredicted RBP15.31■□□□□ 0.04
VRK3-219ENST00000600137 KCNG4Q8TDN1 519 aa15.31■□□□□ 0.04
VRK3-219ENST00000600137 TMEM143Q96AN5 459 aa15.31■□□□□ 0.04
VRK3-219ENST00000600137 IPO9Q96P70 1041 aaKnown RBP15.31■□□□□ 0.04
VRK3-219ENST00000600137 BMP2KQ9NSY1 1161 aaPredicted RBP15.31■□□□□ 0.04
VRK3-219ENST00000600137 SUCLA2Q9P2R7 463 aaPredicted RBP15.31■□□□□ 0.04
VRK3-219ENST00000600137 DNM3Q9UQ16 869 aa15.31■□□□□ 0.04
VRK3-219ENST00000600137 COLQQ9Y215 455 aaPredicted RBP15.31■□□□□ 0.04
VRK3-219ENST00000600137 ATP6V1DQ9Y5K8 247 aa15.31■□□□□ 0.04
VRK3-219ENST00000600137 TRPV2Q9Y5S1 764 aa15.31■□□□□ 0.04
VRK3-219ENST00000600137 PLCG1P19174 1290 aa15.3■□□□□ 0.04
VRK3-219ENST00000600137 TMOD1P28289 359 aa15.3■□□□□ 0.04
VRK3-219ENST00000600137 POLGP54098 1239 aaPredicted RBP15.3■□□□□ 0.04
VRK3-219ENST00000600137 SLC12A3P55017 1021 aa15.3■□□□□ 0.04
VRK3-219ENST00000600137 NLRP11P59045 1033 aaKnown RBP15.3■□□□□ 0.04
VRK3-219ENST00000600137 SHHQ15465 462 aa15.3■□□□□ 0.04
VRK3-219ENST00000600137 KIZQ2M2Z5 673 aa15.3■□□□□ 0.04
VRK3-219ENST00000600137 PLEKHG4Q58EX7 1191 aa15.3■□□□□ 0.04
VRK3-219ENST00000600137 ARSHQ5FYA8 562 aa15.3■□□□□ 0.04
VRK3-219ENST00000600137 IER5Q5VY09 327 aa15.3■□□□□ 0.04
VRK3-219ENST00000600137 RINT1Q6NUQ1 792 aa15.3■□□□□ 0.04
VRK3-219ENST00000600137 DBF4BQ8NFT6 615 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms