RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	OTUD6A	Q7L8S5	288 aa		24.46	■■□□□ 1.51
LTBP4-227	ENST00000600026	PIGO	Q8TEQ8	1089 aa		24.46	■■□□□ 1.51
LTBP4-227	ENST00000600026	CEP170P1	Q96L14	293 aa		24.46	■■□□□ 1.51
LTBP4-227	ENST00000600026	PNMA5	Q96PV4	448 aa		24.46	■■□□□ 1.51
LTBP4-227	ENST00000600026	PLIN2	Q99541	437 aa		24.46	■■□□□ 1.51
LTBP4-227	ENST00000600026	NOC4L	Q9BVI4	516 aa	Known RBP	24.46	■■□□□ 1.51
LTBP4-227	ENST00000600026	PPP1R12C	Q9BZL4	782 aa		24.46	■■□□□ 1.51
LTBP4-227	ENST00000600026	CYP26B1	Q9NR63	512 aa		24.46	■■□□□ 1.51
LTBP4-227	ENST00000600026	ANKEF1	Q9NU02	776 aa		24.46	■■□□□ 1.51
LTBP4-227	ENST00000600026	DDX19A	Q9NUU7	478 aa	Known RBP	24.46	■■□□□ 1.51
LTBP4-227	ENST00000600026	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	24.46	■■□□□ 1.51
LTBP4-227	ENST00000600026	NR2E3	Q9Y5X4	410 aa		24.46	■■□□□ 1.51
LTBP4-227	ENST00000600026	UMODL1	Q5DID0	1318 aa		24.45	■■□□□ 1.5
LTBP4-227	ENST00000600026	ZNF202	O95125	648 aa		24.45	■■□□□ 1.5
LTBP4-227	ENST00000600026	SYN1	P17600	705 aa		24.45	■■□□□ 1.5
LTBP4-227	ENST00000600026	TRIM71	Q2Q1W2	868 aa	Known RBP	24.45	■■□□□ 1.5
LTBP4-227	ENST00000600026	SKOR2	Q2VWA4	1001 aa	Predicted RBP	24.45	■■□□□ 1.5
LTBP4-227	ENST00000600026	XKR9	Q5GH70	373 aa		24.45	■■□□□ 1.5
LTBP4-227	ENST00000600026	FMR1NB	Q8N0W7	255 aa	Predicted RBP	24.45	■■□□□ 1.5
LTBP4-227	ENST00000600026	ENGASE	Q8NFI3	743 aa		24.45	■■□□□ 1.5
LTBP4-227	ENST00000600026	DHX58	Q96C10	678 aa		24.45	■■□□□ 1.5
LTBP4-227	ENST00000600026	CCDC34	Q96HJ3	373 aa		24.45	■■□□□ 1.5
LTBP4-227	ENST00000600026	NACC1	Q96RE7	527 aa		24.45	■■□□□ 1.5
LTBP4-227	ENST00000600026	HIPK3	Q9H422	1215 aa		24.45	■■□□□ 1.5
LTBP4-227	ENST00000600026	CUEDC2	Q9H467	287 aa		24.45	■■□□□ 1.5
LTBP4-227	ENST00000600026	STK17A	Q9UEE5	414 aa		24.45	■■□□□ 1.5
LTBP4-227	ENST00000600026	PRKAG2	Q9UGJ0	569 aa		24.45	■■□□□ 1.5
LTBP4-227	ENST00000600026	DNM3	Q9UQ16	869 aa		24.45	■■□□□ 1.5
LTBP4-227	ENST00000600026	PCDHA2	Q9Y5H9	948 aa		24.45	■■□□□ 1.5
LTBP4-227	ENST00000600026		A0A087X0B3	334 aa		24.44	■■□□□ 1.5
LTBP4-227	ENST00000600026	KIN	O60870	393 aa	Known RBP	24.44	■■□□□ 1.5
LTBP4-227	ENST00000600026	XRCC6	P12956	609 aa	Known RBP eCLIP	24.44	■■□□□ 1.5
LTBP4-227	ENST00000600026	RARRES1	P49788	294 aa		24.44	■■□□□ 1.5
LTBP4-227	ENST00000600026	TBC1D8B	Q0IIM8	1120 aa		24.44	■■□□□ 1.5
LTBP4-227	ENST00000600026	TAF2	Q6P1X5	1199 aa		24.44	■■□□□ 1.5
LTBP4-227	ENST00000600026	CEP57L1	Q8IYX8	460 aa		24.44	■■□□□ 1.5
LTBP4-227	ENST00000600026	CCDC155	Q8N6L0	562 aa		24.44	■■□□□ 1.5
LTBP4-227	ENST00000600026	CAGE1	Q8TC20	777 aa		24.44	■■□□□ 1.5
LTBP4-227	ENST00000600026	CCDC43	Q96MW1	224 aa	Known RBP	24.44	■■□□□ 1.5
LTBP4-227	ENST00000600026	PPME1	Q9Y570	386 aa		24.44	■■□□□ 1.5
LTBP4-227	ENST00000600026	MAGEB2	O15479	319 aa		24.43	■■□□□ 1.5
LTBP4-227	ENST00000600026	NR1I2	O75469	434 aa		24.43	■■□□□ 1.5
LTBP4-227	ENST00000600026	ITGB8	P26012	769 aa		24.43	■■□□□ 1.5
LTBP4-227	ENST00000600026	RBL2	Q08999	1139 aa		24.43	■■□□□ 1.5
LTBP4-227	ENST00000600026	BFSP2	Q13515	415 aa		24.43	■■□□□ 1.5
LTBP4-227	ENST00000600026	SNW1	Q13573	536 aa	Known RBP	24.43	■■□□□ 1.5
LTBP4-227	ENST00000600026	GPT2	Q8TD30	523 aa		24.43	■■□□□ 1.5
LTBP4-227	ENST00000600026	FAM49A	Q9H0Q0	323 aa	Predicted RBP	24.43	■■□□□ 1.5
LTBP4-227	ENST00000600026	DACT1	Q9NYF0	836 aa		24.43	■■□□□ 1.5
LTBP4-227	ENST00000600026	DBR1	Q9UK59	544 aa	Known RBP	24.43	■■□□□ 1.5
LTBP4-227	ENST00000600026	SCN5A	Q14524	2016 aa		24.43	■■□□□ 1.5
LTBP4-227	ENST00000600026	SMIM35	A0A1B0GVV1	85 aa		24.42	■■□□□ 1.5
LTBP4-227	ENST00000600026		E9PMD0	336 aa		24.42	■■□□□ 1.5
LTBP4-227	ENST00000600026	CYP2C18	P33260	490 aa		24.42	■■□□□ 1.5
LTBP4-227	ENST00000600026	E2F4	Q16254	413 aa		24.42	■■□□□ 1.5
LTBP4-227	ENST00000600026	KCNK18	Q7Z418	384 aa		24.42	■■□□□ 1.5
LTBP4-227	ENST00000600026	LINC01465	Q8N7H1	131 aa		24.42	■■□□□ 1.5
LTBP4-227	ENST00000600026	DNAJB3	Q8WWF6	145 aa		24.42	■■□□□ 1.5
LTBP4-227	ENST00000600026	TIGD1	Q96MW7	591 aa		24.42	■■□□□ 1.5
LTBP4-227	ENST00000600026	MAGEF1	Q9HAY2	307 aa		24.42	■■□□□ 1.5
LTBP4-227	ENST00000600026	SERTAD1	Q9UHV2	236 aa		24.42	■■□□□ 1.5
LTBP4-227	ENST00000600026	PITPNM1	O00562	1244 aa		24.41	■■□□□ 1.5
LTBP4-227	ENST00000600026	MAF	O75444	373 aa	Predicted RBP	24.41	■■□□□ 1.5
LTBP4-227	ENST00000600026	TIMP1	P01033	207 aa		24.41	■■□□□ 1.5
LTBP4-227	ENST00000600026	CKB	P12277	381 aa		24.41	■■□□□ 1.5
LTBP4-227	ENST00000600026	RAG1	P15918	1043 aa		24.41	■■□□□ 1.5
LTBP4-227	ENST00000600026	THPO	P40225	353 aa		24.41	■■□□□ 1.5
LTBP4-227	ENST00000600026	RFC5	P40937	340 aa		24.41	■■□□□ 1.5
LTBP4-227	ENST00000600026	CLCN3	P51790	818 aa		24.41	■■□□□ 1.5
LTBP4-227	ENST00000600026	KANK3	Q6NY19	840 aa		24.41	■■□□□ 1.5
LTBP4-227	ENST00000600026	LRRC71	Q8N4P6	559 aa		24.41	■■□□□ 1.5
LTBP4-227	ENST00000600026	METTL13	Q8N6R0	699 aa		24.41	■■□□□ 1.5
LTBP4-227	ENST00000600026	CNNM3	Q8NE01	707 aa		24.41	■■□□□ 1.5
LTBP4-227	ENST00000600026	LARP4B	Q92615	738 aa	Known RBP	24.41	■■□□□ 1.5
LTBP4-227	ENST00000600026	RAD54L	Q92698	747 aa		24.41	■■□□□ 1.5
LTBP4-227	ENST00000600026	WNT8A	Q9H1J5	351 aa		24.41	■■□□□ 1.5
LTBP4-227	ENST00000600026	DHX33	Q9H6R0	707 aa	Known RBP	24.41	■■□□□ 1.5
LTBP4-227	ENST00000600026	BMP2K	Q9NSY1	1161 aa	Predicted RBP	24.41	■■□□□ 1.5
LTBP4-227	ENST00000600026	IGKV6-21	A0A0C4DH24	114 aa		24.4	■■□□□ 1.5
LTBP4-227	ENST00000600026	EYA4	O95677	639 aa		24.4	■■□□□ 1.5
LTBP4-227	ENST00000600026	SLFN14	P0C7P3	912 aa		24.4	■■□□□ 1.5
LTBP4-227	ENST00000600026	POLG	P54098	1239 aa	Predicted RBP	24.4	■■□□□ 1.5
LTBP4-227	ENST00000600026	LONRF3	Q496Y0	759 aa		24.4	■■□□□ 1.5
LTBP4-227	ENST00000600026	EFCAB12	Q6NXP0	572 aa		24.4	■■□□□ 1.5
LTBP4-227	ENST00000600026	KRBA2	Q6ZNG9	492 aa		24.4	■■□□□ 1.5
LTBP4-227	ENST00000600026	RPAIN	Q86UA6	219 aa		24.4	■■□□□ 1.5
LTBP4-227	ENST00000600026	RETREG2	Q8NC44	543 aa		24.4	■■□□□ 1.5
LTBP4-227	ENST00000600026	LRRC15	Q8TF66	581 aa		24.4	■■□□□ 1.5
LTBP4-227	ENST00000600026	BHMT2	Q9H2M3	363 aa		24.4	■■□□□ 1.5
LTBP4-227	ENST00000600026	BLOC1S4	Q9NUP1	217 aa		24.4	■■□□□ 1.5
LTBP4-227	ENST00000600026	HOOK1	Q9UJC3	728 aa	Known RBP	24.4	■■□□□ 1.5
LTBP4-227	ENST00000600026	ACTN4	O43707	911 aa	Known RBP	24.39	■■□□□ 1.49
LTBP4-227	ENST00000600026	CAND2	O75155	1236 aa		24.39	■■□□□ 1.49
LTBP4-227	ENST00000600026	CTSH	P09668	335 aa		24.39	■■□□□ 1.49
LTBP4-227	ENST00000600026	CCL23	P55773	120 aa		24.39	■■□□□ 1.49
LTBP4-227	ENST00000600026	EMC2	Q15006	297 aa		24.39	■■□□□ 1.49
LTBP4-227	ENST00000600026	KLHL40	Q2TBA0	621 aa		24.39	■■□□□ 1.49
LTBP4-227	ENST00000600026	NAALADL2	Q58DX5	795 aa		24.39	■■□□□ 1.49
LTBP4-227	ENST00000600026	ZNF618	Q5T7W0	954 aa		24.39	■■□□□ 1.49
LTBP4-227	ENST00000600026	TRAF7	Q6Q0C0	670 aa		24.39	■■□□□ 1.49

Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms