RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 C1orf112Q9NSG2 853 aa21.15■□□□□ 0.98
PNKP-213ENST00000599543 ST3GAL5Q9UNP4 418 aa21.15■□□□□ 0.98
PNKP-213ENST00000599543 PLAGL2Q9UPG8 496 aa21.15■□□□□ 0.98
PNKP-213ENST00000599543 PLXNA4Q9HCM2 1894 aa21.14■□□□□ 0.97
PNKP-213ENST00000599543 OATP04181 439 aa21.14■□□□□ 0.97
PNKP-213ENST00000599543 TMOD1P28289 359 aa21.14■□□□□ 0.97
PNKP-213ENST00000599543 SFNP31947 248 aa21.14■□□□□ 0.97
PNKP-213ENST00000599543 JAK3P52333 1124 aa21.14■□□□□ 0.97
PNKP-213ENST00000599543 STK3Q13188 491 aa21.14■□□□□ 0.97
PNKP-213ENST00000599543 NAALADL2Q58DX5 795 aa21.14■□□□□ 0.97
PNKP-213ENST00000599543 FAM178BQ8IXR5 827 aa21.14■□□□□ 0.97
PNKP-213ENST00000599543 RGS18Q9NS28 235 aa21.14■□□□□ 0.97
PNKP-213ENST00000599543 AKT3Q9Y243 479 aa21.14■□□□□ 0.97
PNKP-213ENST00000599543 FAM50BQ9Y247 325 aa21.14■□□□□ 0.97
PNKP-213ENST00000599543 GRXCR2A6NFK2 248 aa21.13■□□□□ 0.97
PNKP-213ENST00000599543 MGEA5O60502 916 aa21.13■□□□□ 0.97
PNKP-213ENST00000599543 EIF5BO60841 1220 aaKnown RBP21.13■□□□□ 0.97
PNKP-213ENST00000599543 GPR32O75388 356 aa21.13■□□□□ 0.97
PNKP-213ENST00000599543 SSTR3P32745 418 aaPredicted RBP21.13■□□□□ 0.97
PNKP-213ENST00000599543 GATMP50440 423 aa21.13■□□□□ 0.97
PNKP-213ENST00000599543 CLCN3P51790 818 aa21.13■□□□□ 0.97
PNKP-213ENST00000599543 PRKCEQ02156 737 aa21.13■□□□□ 0.97
PNKP-213ENST00000599543 SLC24A5Q71RS6 500 aa21.13■□□□□ 0.97
PNKP-213ENST00000599543 SLC5A5Q92911 643 aa21.13■□□□□ 0.97
PNKP-213ENST00000599543 EPHX3Q9H6B9 360 aa21.13■□□□□ 0.97
PNKP-213ENST00000599543 NRBP2Q9NSY0 501 aa21.13■□□□□ 0.97
PNKP-213ENST00000599543 EDIL3O43854 480 aa21.12■□□□□ 0.97
PNKP-213ENST00000599543 ITGB1P05556 798 aa21.12■□□□□ 0.97
PNKP-213ENST00000599543 Q4G0T1 1027 aa21.12■□□□□ 0.97
PNKP-213ENST00000599543 EFCAB12Q6NXP0 572 aa21.12■□□□□ 0.97
PNKP-213ENST00000599543 FAM228AQ86W67 206 aa21.12■□□□□ 0.97
PNKP-213ENST00000599543 BLIDQ8IZY5 108 aa21.12■□□□□ 0.97
PNKP-213ENST00000599543 FAM177A1Q8N128 213 aaPredicted RBP21.12■□□□□ 0.97
PNKP-213ENST00000599543 GJD3Q8N144 294 aa21.12■□□□□ 0.97
PNKP-213ENST00000599543 PPP2R3CQ969Q6 453 aa21.12■□□□□ 0.97
PNKP-213ENST00000599543 UNC45AQ9H3U1 944 aa21.12■□□□□ 0.97
PNKP-213ENST00000599543 ZNF862O60290 1169 aa21.11■□□□□ 0.97
PNKP-213ENST00000599543 NEK4P51957 841 aa21.11■□□□□ 0.97
PNKP-213ENST00000599543 AK2P54819 239 aa21.11■□□□□ 0.97
PNKP-213ENST00000599543 HYAL1Q12794 435 aa21.11■□□□□ 0.97
PNKP-213ENST00000599543 UGCGQ16739 394 aa21.11■□□□□ 0.97
PNKP-213ENST00000599543 SPOUT1Q5T280 376 aaKnown RBP21.11■□□□□ 0.97
PNKP-213ENST00000599543 GALNT17Q6IS24 598 aa21.11■□□□□ 0.97
PNKP-213ENST00000599543 ZNF710Q8N1W2 664 aa21.11■□□□□ 0.97
PNKP-213ENST00000599543 LRRC71Q8N4P6 559 aa21.11■□□□□ 0.97
PNKP-213ENST00000599543 KLHL23Q8NBE8 558 aa21.11■□□□□ 0.97
PNKP-213ENST00000599543 DAGLBQ8NCG7 672 aa21.11■□□□□ 0.97
PNKP-213ENST00000599543 GJA10Q969M2 543 aa21.11■□□□□ 0.97
PNKP-213ENST00000599543 CD320Q9NPF0 282 aa21.11■□□□□ 0.97
PNKP-213ENST00000599543 TBKBP1A7MCY6 615 aa21.1■□□□□ 0.97
PNKP-213ENST00000599543 C9IYK1 514 aa21.1■□□□□ 0.97
PNKP-213ENST00000599543 CDKL5O76039 1030 aa21.1■□□□□ 0.97
PNKP-213ENST00000599543 TDP2O95551 362 aa21.1■□□□□ 0.97
PNKP-213ENST00000599543 NLRP11P59045 1033 aaKnown RBP21.1■□□□□ 0.97
PNKP-213ENST00000599543 TBC1D8BQ0IIM8 1120 aa21.1■□□□□ 0.97
PNKP-213ENST00000599543 CAMK1Q14012 370 aa21.1■□□□□ 0.97
PNKP-213ENST00000599543 MIER3Q7Z3K6 550 aa21.1■□□□□ 0.97
PNKP-213ENST00000599543 RDM1Q8NG50 284 aa21.1■□□□□ 0.97
PNKP-213ENST00000599543 SPPL3Q8TCT6 385 aa21.1■□□□□ 0.97
PNKP-213ENST00000599543 KHSRPQ92945 711 aaKnown RBP eCLIP21.1■□□□□ 0.97
PNKP-213ENST00000599543 SCLT1Q96NL6 688 aa21.1■□□□□ 0.97
PNKP-213ENST00000599543 AIFM3Q96NN9 605 aa21.1■□□□□ 0.97
PNKP-213ENST00000599543 KIF2CQ99661 725 aa21.1■□□□□ 0.97
PNKP-213ENST00000599543 IGFLR1Q9H665 355 aa21.1■□□□□ 0.97
PNKP-213ENST00000599543 PCDHB12Q9Y5F1 795 aa21.1■□□□□ 0.97
PNKP-213ENST00000599543 CYP3A7-CYP3A51PA0A087WV96 503 aa21.09■□□□□ 0.97
PNKP-213ENST00000599543 M0R2N6 131 aa21.09■□□□□ 0.97
PNKP-213ENST00000599543 PSMD10O75832 226 aa21.09■□□□□ 0.97
PNKP-213ENST00000599543 CYP3A7P24462 503 aa21.09■□□□□ 0.97
PNKP-213ENST00000599543 DNAJB1P25685 340 aa21.09■□□□□ 0.97
PNKP-213ENST00000599543 NONOQ15233 471 aaKnown RBP eCLIP21.09■□□□□ 0.97
PNKP-213ENST00000599543 CTC1Q2NKJ3 1217 aa21.09■□□□□ 0.97
PNKP-213ENST00000599543 MOXD1Q6UVY6 613 aa21.09■□□□□ 0.97
PNKP-213ENST00000599543 LINC01465Q8N7H1 131 aa21.09■□□□□ 0.97
PNKP-213ENST00000599543 POF1BQ8WVV4 589 aa21.09■□□□□ 0.97
PNKP-213ENST00000599543 ATP6V0A4Q9HBG4 840 aa21.09■□□□□ 0.97
PNKP-213ENST00000599543 AAASQ9NRG9 546 aa21.09■□□□□ 0.97
PNKP-213ENST00000599543 TMEM161AQ9NX61 479 aa21.09■□□□□ 0.97
PNKP-213ENST00000599543 RAPGEFL1Q9UHV5 662 aa21.09■□□□□ 0.97
PNKP-213ENST00000599543 TPCN1Q9ULQ1 816 aa21.09■□□□□ 0.97
PNKP-213ENST00000599543 LARGE1O95461 756 aa21.08■□□□□ 0.97
PNKP-213ENST00000599543 ZSCAN20P17040 1043 aaPredicted RBP21.08■□□□□ 0.97
PNKP-213ENST00000599543 LTBRP36941 435 aa21.08■□□□□ 0.97
PNKP-213ENST00000599543 CLUL1Q15846 466 aa21.08■□□□□ 0.97
PNKP-213ENST00000599543 TMEM31Q5JXX7 168 aa21.08■□□□□ 0.97
PNKP-213ENST00000599543 FAM102BQ5T8I3 360 aa21.08■□□□□ 0.97
PNKP-213ENST00000599543 KRT25Q7Z3Z0 450 aa21.08■□□□□ 0.97
PNKP-213ENST00000599543 ADAMTS10Q9H324 1103 aa21.08■□□□□ 0.97
PNKP-213ENST00000599543 ELAC1Q9H777 363 aaKnown RBP21.08■□□□□ 0.97
PNKP-213ENST00000599543 SEPT9Q9UHD8 586 aaPredicted RBP21.08■□□□□ 0.97
PNKP-213ENST00000599543 DDX25Q9UHL0 483 aaKnown RBP21.08■□□□□ 0.97
PNKP-213ENST00000599543 PI4K2BG5E9Z4 385 aa21.07■□□□□ 0.96
PNKP-213ENST00000599543 FGFR1P11362 822 aa21.07■□□□□ 0.96
PNKP-213ENST00000599543 XBP1P17861 261 aa21.07■□□□□ 0.96
PNKP-213ENST00000599543 EIF4BP23588 611 aaKnown RBP21.07■□□□□ 0.96
PNKP-213ENST00000599543 GTF2F1P35269 517 aaKnown RBP eCLIP21.07■□□□□ 0.96
PNKP-213ENST00000599543 GPC3P51654 580 aa21.07■□□□□ 0.96
PNKP-213ENST00000599543 SCRN1Q12765 414 aa21.07■□□□□ 0.96
PNKP-213ENST00000599543 NPY5RQ15761 445 aa21.07■□□□□ 0.96
PNKP-213ENST00000599543 INF2Q27J81 1249 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms