RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 NOC2LQ9Y3T9 749 aaKnown RBP25.37■■□□□ 1.65
CCDC9-204ENST00000599398 PRRC2BQ5JSZ5 2229 aaKnown RBP25.36■■□□□ 1.65
CCDC9-204ENST00000599398 GTPBP6O43824 516 aaPredicted RBP25.36■■□□□ 1.65
CCDC9-204ENST00000599398 NEMFO60524 1076 aa25.36■■□□□ 1.65
CCDC9-204ENST00000599398 DKC1O60832 514 aaKnown RBP eCLIP25.36■■□□□ 1.65
CCDC9-204ENST00000599398 CRYBB1P53674 252 aaPredicted RBP25.36■■□□□ 1.65
CCDC9-204ENST00000599398 TARBP2Q15633 366 aaKnown RBP25.36■■□□□ 1.65
CCDC9-204ENST00000599398 LINC01599Q8WXQ3 324 aa25.36■■□□□ 1.65
CCDC9-204ENST00000599398 WNT7AO00755 349 aa25.35■■□□□ 1.65
CCDC9-204ENST00000599398 GPR32O75388 356 aa25.35■■□□□ 1.65
CCDC9-204ENST00000599398 STBD1O95210 358 aa25.35■■□□□ 1.65
CCDC9-204ENST00000599398 P4HBP07237 508 aaKnown RBP25.35■■□□□ 1.65
CCDC9-204ENST00000599398 NLRP11P59045 1033 aaKnown RBP25.35■■□□□ 1.65
CCDC9-204ENST00000599398 ERVK-21P61565 698 aa25.35■■□□□ 1.65
CCDC9-204ENST00000599398 EPHA7Q15375 998 aa25.35■■□□□ 1.65
CCDC9-204ENST00000599398 ODR4Q5SWX8 454 aa25.35■■□□□ 1.65
CCDC9-204ENST00000599398 LINC01465Q8N7H1 131 aa25.35■■□□□ 1.65
CCDC9-204ENST00000599398 FBXO18Q8NFZ0 1043 aa25.35■■□□□ 1.65
CCDC9-204ENST00000599398 SP7Q8TDD2 431 aaPredicted RBP25.35■■□□□ 1.65
CCDC9-204ENST00000599398 TBC1D32Q96NH3 1257 aa25.35■■□□□ 1.65
CCDC9-204ENST00000599398 SCLT1Q96NL6 688 aa25.35■■□□□ 1.65
CCDC9-204ENST00000599398 PCDHA12Q9UN75 941 aa25.35■■□□□ 1.65
CCDC9-204ENST00000599398 GPR182O15218 404 aa25.34■■□□□ 1.65
CCDC9-204ENST00000599398 IBSPP21815 317 aaPredicted RBP25.34■■□□□ 1.65
CCDC9-204ENST00000599398 GRB10Q13322 594 aa25.34■■□□□ 1.65
CCDC9-204ENST00000599398 PLA2G4FQ68DD2 849 aa25.34■■□□□ 1.65
CCDC9-204ENST00000599398 ANO5Q75V66 913 aa25.34■■□□□ 1.65
CCDC9-204ENST00000599398 RTN4RL1Q86UN2 441 aaPredicted RBP25.34■■□□□ 1.65
CCDC9-204ENST00000599398 GDPD5Q8WTR4 605 aa25.34■■□□□ 1.65
CCDC9-204ENST00000599398 ZNF668Q96K58 619 aaPredicted RBP25.34■■□□□ 1.65
CCDC9-204ENST00000599398 C17orf80Q9BSJ5 609 aa25.34■■□□□ 1.65
CCDC9-204ENST00000599398 TSPYL2Q9H2G4 693 aaPredicted RBP25.34■■□□□ 1.65
CCDC9-204ENST00000599398 FOXP1Q9H334 677 aaPredicted RBP25.34■■□□□ 1.65
CCDC9-204ENST00000599398 TMX1Q9H3N1 280 aa25.34■■□□□ 1.65
CCDC9-204ENST00000599398 ERVK-5Q9HDB9 667 aa25.34■■□□□ 1.65
CCDC9-204ENST00000599398 ST3GAL5Q9UNP4 418 aa25.34■■□□□ 1.65
CCDC9-204ENST00000599398 COL4A4P53420 1690 aaPredicted RBP25.33■■□□□ 1.65
CCDC9-204ENST00000599398 MCM7P33993 719 aa25.33■■□□□ 1.65
CCDC9-204ENST00000599398 TXKP42681 527 aa25.33■■□□□ 1.65
CCDC9-204ENST00000599398 SPIRE1Q08AE8 756 aa25.33■■□□□ 1.65
CCDC9-204ENST00000599398 IL27Q8NEV9 243 aa25.33■■□□□ 1.65
CCDC9-204ENST00000599398 DYDC2Q96IM9 177 aa25.33■■□□□ 1.65
CCDC9-204ENST00000599398 LXNQ9BS40 222 aa25.33■■□□□ 1.65
CCDC9-204ENST00000599398 TTC12Q9H892 705 aaPredicted RBP25.33■■□□□ 1.65
CCDC9-204ENST00000599398 RGL1Q9NZL6 768 aa25.33■■□□□ 1.65
CCDC9-204ENST00000599398 DENND3A2RUS2 1198 aa25.32■■□□□ 1.64
CCDC9-204ENST00000599398 DNM2P50570 870 aa25.32■■□□□ 1.64
CCDC9-204ENST00000599398 CYP4A11Q02928 519 aa25.32■■□□□ 1.64
CCDC9-204ENST00000599398 FAM228AQ86W67 206 aa25.32■■□□□ 1.64
CCDC9-204ENST00000599398 ZNF710Q8N1W2 664 aa25.32■■□□□ 1.64
CCDC9-204ENST00000599398 FBXO22Q8NEZ5 403 aa25.32■■□□□ 1.64
CCDC9-204ENST00000599398 TMX3Q96JJ7 454 aa25.32■■□□□ 1.64
CCDC9-204ENST00000599398 ADAMTS10Q9H324 1103 aa25.32■■□□□ 1.64
CCDC9-204ENST00000599398 WRAP73Q9P2S5 460 aaPredicted RBP25.32■■□□□ 1.64
CCDC9-204ENST00000599398 MTCH2Q9Y6C9 303 aa25.32■■□□□ 1.64
CCDC9-204ENST00000599398 CD2BP2O95400 341 aaKnown RBP25.31■■□□□ 1.64
CCDC9-204ENST00000599398 STAG3L1P0CL83 205 aa25.31■■□□□ 1.64
CCDC9-204ENST00000599398 GPC3P51654 580 aa25.31■■□□□ 1.64
CCDC9-204ENST00000599398 NPEPPSP55786 919 aa25.31■■□□□ 1.64
CCDC9-204ENST00000599398 DRP2Q13474 957 aa25.31■■□□□ 1.64
CCDC9-204ENST00000599398 CTTNQ14247 550 aaKnown RBP25.31■■□□□ 1.64
CCDC9-204ENST00000599398 NPAS4Q8IUM7 802 aa25.31■■□□□ 1.64
CCDC9-204ENST00000599398 TPH2Q8IWU9 490 aa25.31■■□□□ 1.64
CCDC9-204ENST00000599398 FIBCD1Q8N539 461 aa25.31■■□□□ 1.64
CCDC9-204ENST00000599398 NLRP7Q8WX94 980 aa25.31■■□□□ 1.64
CCDC9-204ENST00000599398 CEP170P1Q96L14 293 aa25.31■■□□□ 1.64
CCDC9-204ENST00000599398 CEP89Q96ST8 783 aa25.31■■□□□ 1.64
CCDC9-204ENST00000599398 ADAM2Q99965 735 aa25.31■■□□□ 1.64
CCDC9-204ENST00000599398 CYP26B1Q9NR63 512 aa25.31■■□□□ 1.64
CCDC9-204ENST00000599398 LRFN2Q9ULH4 789 aa25.31■■□□□ 1.64
CCDC9-204ENST00000599398 KIF3AQ9Y496 699 aa25.31■■□□□ 1.64
CCDC9-204ENST00000599398 NLRC5Q86WI3 1866 aa25.31■■□□□ 1.64
CCDC9-204ENST00000599398 MGEA5O60502 916 aa25.3■■□□□ 1.64
CCDC9-204ENST00000599398 MAFO75444 373 aaPredicted RBP25.3■■□□□ 1.64
CCDC9-204ENST00000599398 NOSTRINQ8IVI9 506 aa25.3■■□□□ 1.64
CCDC9-204ENST00000599398 C4orf19Q8IY42 314 aa25.3■■□□□ 1.64
CCDC9-204ENST00000599398 SAMD11Q96NU1 681 aa25.3■■□□□ 1.64
CCDC9-204ENST00000599398 EIF2AK1Q9BQI3 630 aaKnown RBP25.3■■□□□ 1.64
CCDC9-204ENST00000599398 JPH2Q9BR39 696 aaPredicted RBP25.3■■□□□ 1.64
CCDC9-204ENST00000599398 TMEM60Q9H2L4 133 aa25.3■■□□□ 1.64
CCDC9-204ENST00000599398 ZSWIM4Q9H7M6 989 aa25.3■■□□□ 1.64
CCDC9-204ENST00000599398 PRDM6Q9NQX0 595 aa25.3■■□□□ 1.64
CCDC9-204ENST00000599398 ADGRA3Q8IWK6 1321 aa25.3■■□□□ 1.64
CCDC9-204ENST00000599398 IGKV6-21A0A0C4DH24 114 aa25.29■■□□□ 1.64
CCDC9-204ENST00000599398 LPXNO60711 386 aa25.29■■□□□ 1.64
CCDC9-204ENST00000599398 POU3F3P20264 500 aaPredicted RBP25.29■■□□□ 1.64
CCDC9-204ENST00000599398 EIF4BP23588 611 aaKnown RBP25.29■■□□□ 1.64
CCDC9-204ENST00000599398 YWHABP31946 246 aaKnown RBP25.29■■□□□ 1.64
CCDC9-204ENST00000599398 MCM2P49736 904 aa25.29■■□□□ 1.64
CCDC9-204ENST00000599398 BTG3Q14201 252 aaPredicted RBP25.29■■□□□ 1.64
CCDC9-204ENST00000599398 ZNF174Q15697 407 aa25.29■■□□□ 1.64
CCDC9-204ENST00000599398 EPC2Q52LR7 807 aa25.29■■□□□ 1.64
CCDC9-204ENST00000599398 OTUD6AQ7L8S5 288 aa25.29■■□□□ 1.64
CCDC9-204ENST00000599398 MTMR9Q96QG7 549 aa25.29■■□□□ 1.64
CCDC9-204ENST00000599398 SUCLA2Q9P2R7 463 aaPredicted RBP25.29■■□□□ 1.64
CCDC9-204ENST00000599398 COL4A6Q14031 1691 aa25.29■■□□□ 1.64
CCDC9-204ENST00000599398 DGKIO75912 1065 aa25.28■■□□□ 1.64
CCDC9-204ENST00000599398 SARSP49591 514 aaKnown RBP25.28■■□□□ 1.64
CCDC9-204ENST00000599398 POLGP54098 1239 aaPredicted RBP25.28■■□□□ 1.64
CCDC9-204ENST00000599398 SKIV2LQ15477 1246 aaKnown RBP25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms