RNA–Protein interactions for RNA: ENST00000599339.1

EBI3-202, Transcript of Epstein-Barr virus induced 3, humanhuman

TSL 2

Gene EBI3, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBI3-202ENST00000599339 TBX10O75333 385 aa16.53■□□□□ 0.24
EBI3-202ENST00000599339 DLX2Q07687 328 aaPredicted RBP16.53■□□□□ 0.24
EBI3-202ENST00000599339 ADAM15Q13444 863 aa16.53■□□□□ 0.24
EBI3-202ENST00000599339 TRMT1LQ7Z2T5 733 aaKnown RBP16.53■□□□□ 0.24
EBI3-202ENST00000599339 EFHBQ8N7U6 833 aa16.53■□□□□ 0.24
EBI3-202ENST00000599339 TMEM40Q8WWA1 233 aa16.53■□□□□ 0.24
EBI3-202ENST00000599339 PHKBQ93100 1093 aa16.53■□□□□ 0.24
EBI3-202ENST00000599339 PPP1R16BQ96T49 567 aa16.53■□□□□ 0.24
EBI3-202ENST00000599339 SLC26A6Q9BXS9 759 aa16.53■□□□□ 0.24
EBI3-202ENST00000599339 CDHR5Q9HBB8 845 aa16.53■□□□□ 0.24
EBI3-202ENST00000599339 ATP6V0A4Q9HBG4 840 aa16.53■□□□□ 0.24
EBI3-202ENST00000599339 NRBP2Q9NSY0 501 aa16.53■□□□□ 0.24
EBI3-202ENST00000599339 TMEM161AQ9NX61 479 aa16.53■□□□□ 0.24
EBI3-202ENST00000599339 C9IYK1 514 aa16.52■□□□□ 0.24
EBI3-202ENST00000599339 HOXA2O43364 376 aa16.52■□□□□ 0.24
EBI3-202ENST00000599339 VTNP04004 478 aa16.52■□□□□ 0.24
EBI3-202ENST00000599339 IFNAR1P17181 557 aa16.52■□□□□ 0.24
EBI3-202ENST00000599339 DNAJB1P25685 340 aa16.52■□□□□ 0.24
EBI3-202ENST00000599339 SFNP31947 248 aa16.52■□□□□ 0.24
EBI3-202ENST00000599339 GTF2F1P35269 517 aaKnown RBP eCLIP16.52■□□□□ 0.24
EBI3-202ENST00000599339 GATMP50440 423 aa16.52■□□□□ 0.24
EBI3-202ENST00000599339 FAM228AQ86W67 206 aa16.52■□□□□ 0.24
EBI3-202ENST00000599339 TRIM22Q8IYM9 498 aa16.52■□□□□ 0.24
EBI3-202ENST00000599339 RASGRP4Q8TDF6 673 aa16.52■□□□□ 0.24
EBI3-202ENST00000599339 MICAL1Q8TDZ2 1067 aa16.52■□□□□ 0.24
EBI3-202ENST00000599339 AGXT2Q9BYV1 514 aa16.52■□□□□ 0.24
EBI3-202ENST00000599339 C22orf23Q9BZE7 217 aa16.52■□□□□ 0.24
EBI3-202ENST00000599339 ELAC1Q9H777 363 aaKnown RBP16.52■□□□□ 0.24
EBI3-202ENST00000599339 SH3GLB2Q9NR46 395 aa16.52■□□□□ 0.24
EBI3-202ENST00000599339 AKT3Q9Y243 479 aa16.52■□□□□ 0.24
EBI3-202ENST00000599339 LINC01565O15544 149 aa16.51■□□□□ 0.23
EBI3-202ENST00000599339 GAS7O60861 476 aa16.51■□□□□ 0.23
EBI3-202ENST00000599339 PPFIA3O75145 1194 aa16.51■□□□□ 0.23
EBI3-202ENST00000599339 GPR32O75388 356 aa16.51■□□□□ 0.23
EBI3-202ENST00000599339 OATP04181 439 aa16.51■□□□□ 0.23
EBI3-202ENST00000599339 ZSCAN20P17040 1043 aaPredicted RBP16.51■□□□□ 0.23
EBI3-202ENST00000599339 LAG3P18627 525 aa16.51■□□□□ 0.23
EBI3-202ENST00000599339 IRS1P35568 1242 aa16.51■□□□□ 0.23
EBI3-202ENST00000599339 NRIP1P48552 1158 aa16.51■□□□□ 0.23
EBI3-202ENST00000599339 USP11P51784 963 aa16.51■□□□□ 0.23
EBI3-202ENST00000599339 CLCN3P51790 818 aa16.51■□□□□ 0.23
EBI3-202ENST00000599339 JAK3P52333 1124 aa16.51■□□□□ 0.23
EBI3-202ENST00000599339 NTRK3Q16288 839 aa16.51■□□□□ 0.23
EBI3-202ENST00000599339 EFCAB12Q6NXP0 572 aa16.51■□□□□ 0.23
EBI3-202ENST00000599339 THNSL1Q8IYQ7 743 aa16.51■□□□□ 0.23
EBI3-202ENST00000599339 CCDC136Q96JN2 1154 aa16.51■□□□□ 0.23
EBI3-202ENST00000599339 RIT2Q99578 217 aa16.51■□□□□ 0.23
EBI3-202ENST00000599339 TLE6Q9H808 572 aa16.51■□□□□ 0.23
EBI3-202ENST00000599339 TLR9Q9NR96 1032 aa16.51■□□□□ 0.23
EBI3-202ENST00000599339 DISC1Q9NRI5 854 aa16.51■□□□□ 0.23
EBI3-202ENST00000599339 VPS54Q9P1Q0 977 aa16.51■□□□□ 0.23
EBI3-202ENST00000599339 ADAMTS3O15072 1205 aa16.5■□□□□ 0.23
EBI3-202ENST00000599339 EYA4O95677 639 aa16.5■□□□□ 0.23
EBI3-202ENST00000599339 NLRP5P59047 1200 aa16.5■□□□□ 0.23
EBI3-202ENST00000599339 FAM102BQ5T8I3 360 aa16.5■□□□□ 0.23
EBI3-202ENST00000599339 PDE12Q6L8Q7 609 aaKnown RBP16.5■□□□□ 0.23
EBI3-202ENST00000599339 ADGRD2Q7Z7M1 963 aa16.5■□□□□ 0.23
EBI3-202ENST00000599339 ABI1Q8IZP0 508 aa16.5■□□□□ 0.23
EBI3-202ENST00000599339 LENG9Q96B70 501 aa16.5■□□□□ 0.23
EBI3-202ENST00000599339 MSLNLQ96KJ4 702 aa16.5■□□□□ 0.23
EBI3-202ENST00000599339 SCLT1Q96NL6 688 aa16.5■□□□□ 0.23
EBI3-202ENST00000599339 TEKT3Q9BXF9 490 aa16.5■□□□□ 0.23
EBI3-202ENST00000599339 TMEM117Q9H0C3 514 aa16.5■□□□□ 0.23
EBI3-202ENST00000599339 TYW1Q9NV66 732 aaKnown RBP16.5■□□□□ 0.23
EBI3-202ENST00000599339 FNDC1Q4ZHG4 1894 aaPredicted RBP16.5■□□□□ 0.23
EBI3-202ENST00000599339 CPLX1O14810 134 aa16.49■□□□□ 0.23
EBI3-202ENST00000599339 MSH4O15457 936 aa16.49■□□□□ 0.23
EBI3-202ENST00000599339 EPB41L2O43491 1005 aaKnown RBP16.49■□□□□ 0.23
EBI3-202ENST00000599339 FGF18O76093 207 aa16.49■□□□□ 0.23
EBI3-202ENST00000599339 SRGAP2BP0DMP2 458 aa16.49■□□□□ 0.23
EBI3-202ENST00000599339 EIF4BP23588 611 aaKnown RBP16.49■□□□□ 0.23
EBI3-202ENST00000599339 PDIA3P30101 505 aaKnown RBP16.49■□□□□ 0.23
EBI3-202ENST00000599339 EVCP57679 992 aa16.49■□□□□ 0.23
EBI3-202ENST00000599339 NLRP11P59045 1033 aaKnown RBP16.49■□□□□ 0.23
EBI3-202ENST00000599339 FAM189BP81408 668 aa16.49■□□□□ 0.23
EBI3-202ENST00000599339 PRKCEQ02156 737 aa16.49■□□□□ 0.23
EBI3-202ENST00000599339 COASYQ13057 564 aa16.49■□□□□ 0.23
EBI3-202ENST00000599339 LRCH2Q5VUJ6 765 aa16.49■□□□□ 0.23
EBI3-202ENST00000599339 RBM23Q86U06 439 aaKnown RBP16.49■□□□□ 0.23
EBI3-202ENST00000599339 COLGALT1Q8NBJ5 622 aa16.49■□□□□ 0.23
EBI3-202ENST00000599339 RDM1Q8NG50 284 aa16.49■□□□□ 0.23
EBI3-202ENST00000599339 CDCA3Q99618 268 aaPredicted RBP16.49■□□□□ 0.23
EBI3-202ENST00000599339 PUF60Q9UHX1 559 aaKnown RBP16.49■□□□□ 0.23
EBI3-202ENST00000599339 CHMP2AO43633 222 aa16.48■□□□□ 0.23
EBI3-202ENST00000599339 FGFR1P11362 822 aa16.48■□□□□ 0.23
EBI3-202ENST00000599339 PPM1AP35813 382 aa16.48■□□□□ 0.23
EBI3-202ENST00000599339 CCT2P78371 535 aaKnown RBP16.48■□□□□ 0.23
EBI3-202ENST00000599339 SSRP1Q08945 709 aaKnown RBP16.48■□□□□ 0.23
EBI3-202ENST00000599339 TBC1D8BQ0IIM8 1120 aa16.48■□□□□ 0.23
EBI3-202ENST00000599339 DSC3Q14574 896 aa16.48■□□□□ 0.23
EBI3-202ENST00000599339 CPLX2Q6PUV4 134 aaKnown RBP16.48■□□□□ 0.23
EBI3-202ENST00000599339 LRRC43Q8N309 656 aa16.48■□□□□ 0.23
EBI3-202ENST00000599339 LRRC71Q8N4P6 559 aa16.48■□□□□ 0.23
EBI3-202ENST00000599339 SMRP1Q8NCR6 262 aa16.48■□□□□ 0.23
EBI3-202ENST00000599339 SLC5A5Q92911 643 aa16.48■□□□□ 0.23
EBI3-202ENST00000599339 NCOA5Q9HCD5 579 aaKnown RBP16.48■□□□□ 0.23
EBI3-202ENST00000599339 CLEC1BQ9P126 229 aa16.48■□□□□ 0.23
EBI3-202ENST00000599339 LZTS1Q9Y250 596 aa16.48■□□□□ 0.23
EBI3-202ENST00000599339 MUC6Q6W4X9 2439 aa16.48■□□□□ 0.23
EBI3-202ENST00000599339 PLXNA4Q9HCM2 1894 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms