RNA–Protein interactions for RNA: ENST00000599044.1

CCDC61-207, Transcript of coiled-coil domain containing 61, humanhuman

TSL 2

Gene CCDC61, Length 849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-207ENST00000599044 INF2Q27J81 1249 aa25.84■■□□□ 1.73
CCDC61-207ENST00000599044 CPLX2Q6PUV4 134 aaKnown RBP25.84■■□□□ 1.73
CCDC61-207ENST00000599044 ETNPPLQ8TBG4 499 aa25.84■■□□□ 1.73
CCDC61-207ENST00000599044 PHF20Q9BVI0 1012 aa25.84■■□□□ 1.73
CCDC61-207ENST00000599044 ADAMTS10Q9H324 1103 aa25.84■■□□□ 1.73
CCDC61-207ENST00000599044 RGS18Q9NS28 235 aa25.84■■□□□ 1.73
CCDC61-207ENST00000599044 CEP131Q9UPN4 1083 aa25.84■■□□□ 1.73
CCDC61-207ENST00000599044 RWDD3Q9Y3V2 267 aa25.84■■□□□ 1.73
CCDC61-207ENST00000599044 TMEM150BA6NC51 233 aa25.83■■□□□ 1.73
CCDC61-207ENST00000599044 H3BQ06 376 aaPredicted RBP25.83■■□□□ 1.73
CCDC61-207ENST00000599044 PFKFB2O60825 505 aa25.83■■□□□ 1.73
CCDC61-207ENST00000599044 STBD1O95210 358 aa25.83■■□□□ 1.73
CCDC61-207ENST00000599044 STAG3L1P0CL83 205 aa25.83■■□□□ 1.73
CCDC61-207ENST00000599044 NLRP11P59045 1033 aaKnown RBP25.83■■□□□ 1.73
CCDC61-207ENST00000599044 COL19A1Q14993 1142 aa25.83■■□□□ 1.73
CCDC61-207ENST00000599044 FAM102BQ5T8I3 360 aa25.83■■□□□ 1.73
CCDC61-207ENST00000599044 NEK9Q8TD19 979 aa25.83■■□□□ 1.73
CCDC61-207ENST00000599044 KHSRPQ92945 711 aaKnown RBP eCLIP25.83■■□□□ 1.73
CCDC61-207ENST00000599044 FAM167AQ96KS9 214 aa25.83■■□□□ 1.73
CCDC61-207ENST00000599044 C22orf23Q9BZE7 217 aa25.83■■□□□ 1.73
CCDC61-207ENST00000599044 SLKQ9H2G2 1235 aaPredicted RBP25.83■■□□□ 1.73
CCDC61-207ENST00000599044 NRBP2Q9NSY0 501 aa25.83■■□□□ 1.73
CCDC61-207ENST00000599044 LRFN2Q9ULH4 789 aa25.83■■□□□ 1.73
CCDC61-207ENST00000599044 PLAGL2Q9UPG8 496 aa25.83■■□□□ 1.73
CCDC61-207ENST00000599044 EVPLQ92817 2033 aa25.83■■□□□ 1.73
CCDC61-207ENST00000599044 C9IYK1 514 aa25.82■■□□□ 1.72
CCDC61-207ENST00000599044 GPR182O15218 404 aa25.82■■□□□ 1.72
CCDC61-207ENST00000599044 MAGEB2O15479 319 aa25.82■■□□□ 1.72
CCDC61-207ENST00000599044 SLC37A4O43826 429 aa25.82■■□□□ 1.72
CCDC61-207ENST00000599044 SFNP31947 248 aa25.82■■□□□ 1.72
CCDC61-207ENST00000599044 JAK3P52333 1124 aa25.82■■□□□ 1.72
CCDC61-207ENST00000599044 NONOQ15233 471 aaKnown RBP eCLIP25.82■■□□□ 1.72
CCDC61-207ENST00000599044 GALNT17Q6IS24 598 aa25.82■■□□□ 1.72
CCDC61-207ENST00000599044 OXER1Q8TDS5 423 aa25.82■■□□□ 1.72
CCDC61-207ENST00000599044 SH2D3AQ9BRG2 576 aa25.82■■□□□ 1.72
CCDC61-207ENST00000599044 AKT3Q9Y243 479 aa25.82■■□□□ 1.72
CCDC61-207ENST00000599044 PCDHB7Q9Y5E2 793 aa25.82■■□□□ 1.72
CCDC61-207ENST00000599044 DENND3A2RUS2 1198 aa25.81■■□□□ 1.72
CCDC61-207ENST00000599044 ITGB1P05556 798 aa25.81■■□□□ 1.72
CCDC61-207ENST00000599044 IL9P15248 144 aa25.81■■□□□ 1.72
CCDC61-207ENST00000599044 GTF2F1P35269 517 aaKnown RBP eCLIP25.81■■□□□ 1.72
CCDC61-207ENST00000599044 AK2P54819 239 aa25.81■■□□□ 1.72
CCDC61-207ENST00000599044 DRP2Q13474 957 aa25.81■■□□□ 1.72
CCDC61-207ENST00000599044 DSC3Q14574 896 aa25.81■■□□□ 1.72
CCDC61-207ENST00000599044 TARBP2Q15633 366 aaKnown RBP25.81■■□□□ 1.72
CCDC61-207ENST00000599044 SLC24A5Q71RS6 500 aa25.81■■□□□ 1.72
CCDC61-207ENST00000599044 MIER3Q7Z3K6 550 aa25.81■■□□□ 1.72
CCDC61-207ENST00000599044 PABPC5Q96DU9 382 aaKnown RBP25.81■■□□□ 1.72
CCDC61-207ENST00000599044 CEP89Q96ST8 783 aa25.81■■□□□ 1.72
CCDC61-207ENST00000599044 PLVAPQ9BX97 442 aa25.81■■□□□ 1.72
CCDC61-207ENST00000599044 LMAN2LQ9H0V9 348 aa25.81■■□□□ 1.72
CCDC61-207ENST00000599044 HCSTQ9UBK5 93 aa25.81■■□□□ 1.72
CCDC61-207ENST00000599044 DDX25Q9UHL0 483 aaKnown RBP25.81■■□□□ 1.72
CCDC61-207ENST00000599044 MYH9P35579 1960 aaKnown RBP25.8■■□□□ 1.72
CCDC61-207ENST00000599044 KIAA1671Q9BY89 1806 aa25.8■■□□□ 1.72
CCDC61-207ENST00000599044 LTBRP36941 435 aa25.8■■□□□ 1.72
CCDC61-207ENST00000599044 FAM189BP81408 668 aa25.8■■□□□ 1.72
CCDC61-207ENST00000599044 HYAL1Q12794 435 aa25.8■■□□□ 1.72
CCDC61-207ENST00000599044 LETM2Q2VYF4 491 aa25.8■■□□□ 1.72
CCDC61-207ENST00000599044 PTCRAQ6ISU1 281 aaPredicted RBP25.8■■□□□ 1.72
CCDC61-207ENST00000599044 EP400NLQ6ZTU2 488 aa25.8■■□□□ 1.72
CCDC61-207ENST00000599044 KLHL23Q8NBE8 558 aa25.8■■□□□ 1.72
CCDC61-207ENST00000599044 SPPL3Q8TCT6 385 aa25.8■■□□□ 1.72
CCDC61-207ENST00000599044 EPHX3Q9H6B9 360 aa25.8■■□□□ 1.72
CCDC61-207ENST00000599044 RAPGEFL1Q9UHV5 662 aa25.8■■□□□ 1.72
CCDC61-207ENST00000599044 LARGE1O95461 756 aa25.79■■□□□ 1.72
CCDC61-207ENST00000599044 MMP1P03956 469 aa25.79■■□□□ 1.72
CCDC61-207ENST00000599044 EARS2Q5JPH6 523 aaKnown RBP25.79■■□□□ 1.72
CCDC61-207ENST00000599044 MOXD1Q6UVY6 613 aa25.79■■□□□ 1.72
CCDC61-207ENST00000599044 KRT25Q7Z3Z0 450 aa25.79■■□□□ 1.72
CCDC61-207ENST00000599044 FAM177A1Q8N128 213 aaPredicted RBP25.79■■□□□ 1.72
CCDC61-207ENST00000599044 NECAB1Q8N987 351 aa25.79■■□□□ 1.72
CCDC61-207ENST00000599044 P2RX5Q93086 422 aa25.79■■□□□ 1.72
CCDC61-207ENST00000599044 C1QTNF1Q9BXJ1 281 aa25.79■■□□□ 1.72
CCDC61-207ENST00000599044 C1orf112Q9NSG2 853 aa25.79■■□□□ 1.72
CCDC61-207ENST00000599044 CLDND1Q9NY35 253 aa25.79■■□□□ 1.72
CCDC61-207ENST00000599044 STK36Q9NRP7 1315 aa25.79■■□□□ 1.72
CCDC61-207ENST00000599044 WDR81Q562E7 1941 aa25.78■■□□□ 1.72
CCDC61-207ENST00000599044 GRXCR2A6NFK2 248 aa25.78■■□□□ 1.72
CCDC61-207ENST00000599044 EML1O00423 815 aa25.78■■□□□ 1.72
CCDC61-207ENST00000599044 CDKL5O76039 1030 aa25.78■■□□□ 1.72
CCDC61-207ENST00000599044 FGFR1P11362 822 aa25.78■■□□□ 1.72
CCDC61-207ENST00000599044 FDPSP14324 419 aaKnown RBP25.78■■□□□ 1.72
CCDC61-207ENST00000599044 FGFR4P22455 802 aa25.78■■□□□ 1.72
CCDC61-207ENST00000599044 IRS1P35568 1242 aa25.78■■□□□ 1.72
CCDC61-207ENST00000599044 GPC3P51654 580 aa25.78■■□□□ 1.72
CCDC61-207ENST00000599044 ANAPC15P60006 121 aa25.78■■□□□ 1.72
CCDC61-207ENST00000599044 DLX2Q07687 328 aaPredicted RBP25.78■■□□□ 1.72
CCDC61-207ENST00000599044 RDM1Q8NG50 284 aa25.78■■□□□ 1.72
CCDC61-207ENST00000599044 MAP7D2Q96T17 732 aa25.78■■□□□ 1.72
CCDC61-207ENST00000599044 NIFKQ9BYG3 293 aaKnown RBP25.78■■□□□ 1.72
CCDC61-207ENST00000599044 SEPT9Q9UHD8 586 aaPredicted RBP25.78■■□□□ 1.72
CCDC61-207ENST00000599044 TBKBP1A7MCY6 615 aa25.77■■□□□ 1.72
CCDC61-207ENST00000599044 LINC01565O15544 149 aa25.77■■□□□ 1.72
CCDC61-207ENST00000599044 CSDE1O75534 798 aaKnown RBP25.77■■□□□ 1.72
CCDC61-207ENST00000599044 EIF4BP23588 611 aaKnown RBP25.77■■□□□ 1.72
CCDC61-207ENST00000599044 TMOD1P28289 359 aa25.77■■□□□ 1.72
CCDC61-207ENST00000599044 CTC1Q2NKJ3 1217 aa25.77■■□□□ 1.72
CCDC61-207ENST00000599044 MTERF2Q49AM1 385 aa25.77■■□□□ 1.72
CCDC61-207ENST00000599044 ODR4Q5SWX8 454 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms