RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 CHD8Q9HCK8 2581 aa15.86■□□□□ 0.13
SHKBP1-218ENST00000598907 LOXHD1Q8IVV2 1947 aa15.86■□□□□ 0.13
SHKBP1-218ENST00000598907 PBX3P40426 434 aa15.86■□□□□ 0.13
SHKBP1-218ENST00000598907 MCM2P49736 904 aa15.86■□□□□ 0.13
SHKBP1-218ENST00000598907 NEDD9Q14511 834 aa15.86■□□□□ 0.13
SHKBP1-218ENST00000598907 FAM102BQ5T8I3 360 aa15.86■□□□□ 0.13
SHKBP1-218ENST00000598907 ZC3H14Q6PJT7 736 aaKnown RBP15.86■□□□□ 0.13
SHKBP1-218ENST00000598907 PNMA1Q8ND90 353 aa15.86■□□□□ 0.13
SHKBP1-218ENST00000598907 CHAMP1Q96JM3 812 aa15.86■□□□□ 0.13
SHKBP1-218ENST00000598907 AMNQ9BXJ7 453 aa15.86■□□□□ 0.13
SHKBP1-218ENST00000598907 PCDHA1Q9Y5I3 950 aa15.86■□□□□ 0.13
SHKBP1-218ENST00000598907 TRPV2Q9Y5S1 764 aa15.86■□□□□ 0.13
SHKBP1-218ENST00000598907 M0QZ92 97 aa15.85■□□□□ 0.13
SHKBP1-218ENST00000598907 TCF7P36402 384 aaPredicted RBP15.85■□□□□ 0.13
SHKBP1-218ENST00000598907 SARSP49591 514 aaKnown RBP15.85■□□□□ 0.13
SHKBP1-218ENST00000598907 SEMA3FQ13275 785 aa15.85■□□□□ 0.13
SHKBP1-218ENST00000598907 IFIT1BQ5T764 474 aaKnown RBP15.85■□□□□ 0.13
SHKBP1-218ENST00000598907 TMC7Q7Z402 723 aa15.85■□□□□ 0.13
SHKBP1-218ENST00000598907 PLCD3Q8N3E9 789 aa15.85■□□□□ 0.13
SHKBP1-218ENST00000598907 ZNF274Q96GC6 653 aaPredicted RBP15.85■□□□□ 0.13
SHKBP1-218ENST00000598907 TMX1Q9H3N1 280 aa15.85■□□□□ 0.13
SHKBP1-218ENST00000598907 RTEL1Q9NZ71 1219 aa15.85■□□□□ 0.13
SHKBP1-218ENST00000598907 PUF60Q9UHX1 559 aaKnown RBP15.85■□□□□ 0.13
SHKBP1-218ENST00000598907 TPCN1Q9ULQ1 816 aa15.85■□□□□ 0.13
SHKBP1-218ENST00000598907 LIMCH1Q9UPQ0 1083 aa15.85■□□□□ 0.13
SHKBP1-218ENST00000598907 DENND4AQ7Z401 1863 aa15.84■□□□□ 0.13
SHKBP1-218ENST00000598907 NARSO43776 548 aaKnown RBP15.84■□□□□ 0.13
SHKBP1-218ENST00000598907 PPP1R11O60927 126 aaPredicted RBP15.84■□□□□ 0.13
SHKBP1-218ENST00000598907 EOMESO95936 686 aa15.84■□□□□ 0.13
SHKBP1-218ENST00000598907 CFHP08603 1231 aa15.84■□□□□ 0.13
SHKBP1-218ENST00000598907 FGFR1P11362 822 aa15.84■□□□□ 0.13
SHKBP1-218ENST00000598907 LAG3P18627 525 aa15.84■□□□□ 0.13
SHKBP1-218ENST00000598907 RCAN1P53805 252 aa15.84■□□□□ 0.13
SHKBP1-218ENST00000598907 ATXN1P54253 815 aaKnown RBP15.84■□□□□ 0.13
SHKBP1-218ENST00000598907 FGD1P98174 961 aa15.84■□□□□ 0.13
SHKBP1-218ENST00000598907 TROAPQ12815 778 aa15.84■□□□□ 0.13
SHKBP1-218ENST00000598907 NFX1Q12986 1120 aaKnown RBP15.84■□□□□ 0.13
SHKBP1-218ENST00000598907 TDGQ13569 410 aa15.84■□□□□ 0.13
SHKBP1-218ENST00000598907 ASPRV1Q53RT3 343 aa15.84■□□□□ 0.13
SHKBP1-218ENST00000598907 MARCH8Q5T0T0 291 aa15.84■□□□□ 0.13
SHKBP1-218ENST00000598907 IER5Q5VY09 327 aa15.84■□□□□ 0.13
SHKBP1-218ENST00000598907 KIAA1841Q6NSI8 718 aa15.84■□□□□ 0.13
SHKBP1-218ENST00000598907 APOA5Q6Q788 366 aa15.84■□□□□ 0.13
SHKBP1-218ENST00000598907 FEZF2Q8TBJ5 459 aa15.84■□□□□ 0.13
SHKBP1-218ENST00000598907 LARP6Q9BRS8 491 aaKnown RBP15.84■□□□□ 0.13
SHKBP1-218ENST00000598907 KAT14Q9H8E8 782 aa15.84■□□□□ 0.13
SHKBP1-218ENST00000598907 NGRNQ9NPE2 291 aaKnown RBP15.84■□□□□ 0.13
SHKBP1-218ENST00000598907 CYP26B1Q9NR63 512 aa15.84■□□□□ 0.13
SHKBP1-218ENST00000598907 NCDNQ9UBB6 729 aa15.84■□□□□ 0.13
SHKBP1-218ENST00000598907 DUSP12Q9UNI6 340 aa15.84■□□□□ 0.13
SHKBP1-218ENST00000598907 IGSF9BQ9UPX0 1349 aa15.84■□□□□ 0.13
SHKBP1-218ENST00000598907 NID2Q14112 1375 aa15.84■□□□□ 0.13
SHKBP1-218ENST00000598907 KLF18A0A0U1RQI7 1052 aa15.83■□□□□ 0.12
SHKBP1-218ENST00000598907 CCDC69A6NI79 296 aa15.83■□□□□ 0.12
SHKBP1-218ENST00000598907 SPATA31C2B4DYI2 1134 aa15.83■□□□□ 0.12
SHKBP1-218ENST00000598907 FIBPO43427 364 aa15.83■□□□□ 0.12
SHKBP1-218ENST00000598907 MGEA5O60502 916 aa15.83■□□□□ 0.12
SHKBP1-218ENST00000598907 PDIA3P30101 505 aaKnown RBP15.83■□□□□ 0.12
SHKBP1-218ENST00000598907 MRPS9P82933 396 aaKnown RBP15.83■□□□□ 0.12
SHKBP1-218ENST00000598907 GHRHRQ02643 423 aa15.83■□□□□ 0.12
SHKBP1-218ENST00000598907 KIAA0319Q5VV43 1072 aa15.83■□□□□ 0.12
SHKBP1-218ENST00000598907 ZNF654Q8IZM8 581 aa15.83■□□□□ 0.12
SHKBP1-218ENST00000598907 ZSCAN31Q96LW9 406 aaPredicted RBP15.83■□□□□ 0.12
SHKBP1-218ENST00000598907 MAP3K14Q99558 947 aa15.83■□□□□ 0.12
SHKBP1-218ENST00000598907 CWH43Q9H720 699 aa15.83■□□□□ 0.12
SHKBP1-218ENST00000598907 CA14Q9ULX7 337 aa15.83■□□□□ 0.12
SHKBP1-218ENST00000598907 GINS2Q9Y248 185 aa15.83■□□□□ 0.12
SHKBP1-218ENST00000598907 LZTS1Q9Y250 596 aa15.83■□□□□ 0.12
SHKBP1-218ENST00000598907 ATRXP46100 2492 aa15.83■□□□□ 0.12
SHKBP1-218ENST00000598907 DENND3A2RUS2 1198 aa15.82■□□□□ 0.12
SHKBP1-218ENST00000598907 DCDC2BA2VCK2 349 aa15.82■□□□□ 0.12
SHKBP1-218ENST00000598907 MBLAC1A4D2B0 266 aaPredicted RBP15.82■□□□□ 0.12
SHKBP1-218ENST00000598907 GCOM1H8Y6P7 765 aaPredicted RBP15.82■□□□□ 0.12
SHKBP1-218ENST00000598907 CLASP2O75122 1294 aaKnown RBP15.82■□□□□ 0.12
SHKBP1-218ENST00000598907 DDAH1O94760 285 aa15.82■□□□□ 0.12
SHKBP1-218ENST00000598907 LARGE1O95461 756 aa15.82■□□□□ 0.12
SHKBP1-218ENST00000598907 PARP1P09874 1014 aaKnown RBP15.82■□□□□ 0.12
SHKBP1-218ENST00000598907 POLR2MP0CAP2 368 aa15.82■□□□□ 0.12
SHKBP1-218ENST00000598907 SP9P0CG40 484 aa15.82■□□□□ 0.12
SHKBP1-218ENST00000598907 PLCB3Q01970 1234 aa15.82■□□□□ 0.12
SHKBP1-218ENST00000598907 SMC1AQ14683 1233 aaKnown RBP15.82■□□□□ 0.12
SHKBP1-218ENST00000598907 ME3Q16798 604 aa15.82■□□□□ 0.12
SHKBP1-218ENST00000598907 ATAT1Q5SQI0 421 aa15.82■□□□□ 0.12
SHKBP1-218ENST00000598907 XRRA1Q6P2D8 792 aa15.82■□□□□ 0.12
SHKBP1-218ENST00000598907 NFXL1Q6ZNB6 911 aa15.82■□□□□ 0.12
SHKBP1-218ENST00000598907 GLG1Q92896 1179 aa15.82■□□□□ 0.12
SHKBP1-218ENST00000598907 ACSF2Q96CM8 615 aaPredicted RBP15.82■□□□□ 0.12
SHKBP1-218ENST00000598907 INPP4AQ96PE3 977 aaPredicted RBP15.82■□□□□ 0.12
SHKBP1-218ENST00000598907 CDV3Q9UKY7 258 aaKnown RBP15.82■□□□□ 0.12
SHKBP1-218ENST00000598907 USTQ9Y2C2 406 aa15.82■□□□□ 0.12
SHKBP1-218ENST00000598907 SLC12A7Q9Y666 1083 aa15.82■□□□□ 0.12
SHKBP1-218ENST00000598907 C2orf71A6NGG8 1288 aa15.81■□□□□ 0.12
SHKBP1-218ENST00000598907 K7ELQ4 463 aaPredicted RBP15.81■□□□□ 0.12
SHKBP1-218ENST00000598907 PFKFB2O60825 505 aa15.81■□□□□ 0.12
SHKBP1-218ENST00000598907 DCNP07585 359 aaKnown RBP15.81■□□□□ 0.12
SHKBP1-218ENST00000598907 TMC5Q6UXY8 1006 aa15.81■□□□□ 0.12
SHKBP1-218ENST00000598907 CATIPQ7Z7H3 387 aa15.81■□□□□ 0.12
SHKBP1-218ENST00000598907 HOMER1Q86YM7 354 aa15.81■□□□□ 0.12
SHKBP1-218ENST00000598907 TRAPPC12Q8WVT3 735 aa15.81■□□□□ 0.12
SHKBP1-218ENST00000598907 TMX3Q96JJ7 454 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms