RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 BMP1P13497 986 aa15.5■□□□□ 0.07
SCAF1-203ENST00000598359 XBP1P17861 261 aa15.5■□□□□ 0.07
SCAF1-203ENST00000598359 SFNP31947 248 aa15.5■□□□□ 0.07
SCAF1-203ENST00000598359 CTNNB1P35222 781 aa15.5■□□□□ 0.07
SCAF1-203ENST00000598359 GPM6BQ13491 265 aa15.5■□□□□ 0.07
SCAF1-203ENST00000598359 PAN2Q504Q3 1202 aaKnown RBP15.5■□□□□ 0.07
SCAF1-203ENST00000598359 EFCAB12Q6NXP0 572 aa15.5■□□□□ 0.07
SCAF1-203ENST00000598359 B3GNT9Q6UX72 402 aa15.5■□□□□ 0.07
SCAF1-203ENST00000598359 FAM177A1Q8N128 213 aaPredicted RBP15.5■□□□□ 0.07
SCAF1-203ENST00000598359 BANK1Q8NDB2 785 aa15.5■□□□□ 0.07
SCAF1-203ENST00000598359 FAM167AQ96KS9 214 aa15.5■□□□□ 0.07
SCAF1-203ENST00000598359 IPO9Q96P70 1041 aaKnown RBP15.5■□□□□ 0.07
SCAF1-203ENST00000598359 NRBP2Q9NSY0 501 aa15.5■□□□□ 0.07
SCAF1-203ENST00000598359 ST3GAL5Q9UNP4 418 aa15.5■□□□□ 0.07
SCAF1-203ENST00000598359 AKT3Q9Y243 479 aa15.5■□□□□ 0.07
SCAF1-203ENST00000598359 EVPLQ92817 2033 aa15.5■□□□□ 0.07
SCAF1-203ENST00000598359 MYH9P35579 1960 aaKnown RBP15.49■□□□□ 0.07
SCAF1-203ENST00000598359 EML1O00423 815 aa15.49■□□□□ 0.07
SCAF1-203ENST00000598359 CCNT1O60563 726 aaKnown RBP15.49■□□□□ 0.07
SCAF1-203ENST00000598359 DGKIO75912 1065 aa15.49■□□□□ 0.07
SCAF1-203ENST00000598359 CSPG5O95196 566 aa15.49■□□□□ 0.07
SCAF1-203ENST00000598359 LINC00271P0C7V0 271 aa15.49■□□□□ 0.07
SCAF1-203ENST00000598359 NLRP11P59045 1033 aaKnown RBP15.49■□□□□ 0.07
SCAF1-203ENST00000598359 BTG3Q14201 252 aaPredicted RBP15.49■□□□□ 0.07
SCAF1-203ENST00000598359 MTERF2Q49AM1 385 aa15.49■□□□□ 0.07
SCAF1-203ENST00000598359 MOXD1Q6UVY6 613 aa15.49■□□□□ 0.07
SCAF1-203ENST00000598359 NEK8Q86SG6 692 aa15.49■□□□□ 0.07
SCAF1-203ENST00000598359 FAM228AQ86W67 206 aa15.49■□□□□ 0.07
SCAF1-203ENST00000598359 CRIPAKQ8N1N5 446 aa15.49■□□□□ 0.07
SCAF1-203ENST00000598359 LINC01465Q8N7H1 131 aa15.49■□□□□ 0.07
SCAF1-203ENST00000598359 ZNF689Q96CS4 500 aaPredicted RBP15.49■□□□□ 0.07
SCAF1-203ENST00000598359 FTHL17Q9BXU8 183 aa15.49■□□□□ 0.07
SCAF1-203ENST00000598359 SEPT9Q9UHD8 586 aaPredicted RBP15.49■□□□□ 0.07
SCAF1-203ENST00000598359 VAV3Q9UKW4 847 aa15.49■□□□□ 0.07
SCAF1-203ENST00000598359 CEP131Q9UPN4 1083 aa15.49■□□□□ 0.07
SCAF1-203ENST00000598359 WDR81Q562E7 1941 aa15.49■□□□□ 0.07
SCAF1-203ENST00000598359 H3BNC9 293 aa15.48■□□□□ 0.07
SCAF1-203ENST00000598359 STBD1O95210 358 aa15.48■□□□□ 0.07
SCAF1-203ENST00000598359 KRT2P35908 639 aa15.48■□□□□ 0.07
SCAF1-203ENST00000598359 CRYBB1P53674 252 aaPredicted RBP15.48■□□□□ 0.07
SCAF1-203ENST00000598359 DRP2Q13474 957 aa15.48■□□□□ 0.07
SCAF1-203ENST00000598359 POTEDQ86YR6 584 aa15.48■□□□□ 0.07
SCAF1-203ENST00000598359 NPAS4Q8IUM7 802 aa15.48■□□□□ 0.07
SCAF1-203ENST00000598359 WASF1Q92558 559 aa15.48■□□□□ 0.07
SCAF1-203ENST00000598359 SAMD11Q96NU1 681 aa15.48■□□□□ 0.07
SCAF1-203ENST00000598359 ADAM2Q99965 735 aa15.48■□□□□ 0.07
SCAF1-203ENST00000598359 ADAMTS10Q9H324 1103 aa15.48■□□□□ 0.07
SCAF1-203ENST00000598359 EPHX3Q9H6B9 360 aa15.48■□□□□ 0.07
SCAF1-203ENST00000598359 KCNMB3Q9NPA1 279 aa15.48■□□□□ 0.07
SCAF1-203ENST00000598359 LMCD1Q9NZU5 365 aa15.48■□□□□ 0.07
SCAF1-203ENST00000598359 MRPL42Q9Y6G3 142 aaKnown RBP15.48■□□□□ 0.07
SCAF1-203ENST00000598359 TTC3P53804 2025 aa15.48■□□□□ 0.07
SCAF1-203ENST00000598359 DENND3A2RUS2 1198 aa15.47■□□□□ 0.07
SCAF1-203ENST00000598359 DDX11L8A8MPP1 907 aa15.47■□□□□ 0.07
SCAF1-203ENST00000598359 MAGEB2O15479 319 aa15.47■□□□□ 0.07
SCAF1-203ENST00000598359 FGFR4P22455 802 aa15.47■□□□□ 0.07
SCAF1-203ENST00000598359 TBC1D8BQ0IIM8 1120 aa15.47■□□□□ 0.07
SCAF1-203ENST00000598359 TARBP2Q15633 366 aaKnown RBP15.47■□□□□ 0.07
SCAF1-203ENST00000598359 PLA2G4FQ68DD2 849 aa15.47■□□□□ 0.07
SCAF1-203ENST00000598359 PPP4R3AQ6IN85 833 aa15.47■□□□□ 0.07
SCAF1-203ENST00000598359 NLRC5Q86WI3 1866 aa15.47■□□□□ 0.07
SCAF1-203ENST00000598359 RDM1Q8NG50 284 aa15.47■□□□□ 0.07
SCAF1-203ENST00000598359 HAS1Q92839 578 aa15.47■□□□□ 0.07
SCAF1-203ENST00000598359 TNFRSF25Q93038 417 aa15.47■□□□□ 0.07
SCAF1-203ENST00000598359 HLA-CQ95604 372 aa15.47■□□□□ 0.07
SCAF1-203ENST00000598359 MRPL38Q96DV4 380 aaKnown RBP15.47■□□□□ 0.07
SCAF1-203ENST00000598359 MAP7D2Q96T17 732 aa15.47■□□□□ 0.07
SCAF1-203ENST00000598359 LRFN2Q9ULH4 789 aa15.47■□□□□ 0.07
SCAF1-203ENST00000598359 BTBD18B2RXH4 712 aa15.46■□□□□ 0.07
SCAF1-203ENST00000598359 WNT7AO00755 349 aa15.46■□□□□ 0.07
SCAF1-203ENST00000598359 GRM6O15303 877 aa15.46■□□□□ 0.07
SCAF1-203ENST00000598359 CSDE1O75534 798 aaKnown RBP15.46■□□□□ 0.07
SCAF1-203ENST00000598359 BMPR1AP36894 532 aa15.46■□□□□ 0.07
SCAF1-203ENST00000598359 SARSP49591 514 aaKnown RBP15.46■□□□□ 0.07
SCAF1-203ENST00000598359 GUCY1B3Q02153 619 aa15.46■□□□□ 0.07
SCAF1-203ENST00000598359 AAK1Q2M2I8 961 aa15.46■□□□□ 0.07
SCAF1-203ENST00000598359 XKR3Q5GH77 459 aa15.46■□□□□ 0.07
SCAF1-203ENST00000598359 CCDC83Q8IWF9 413 aa15.46■□□□□ 0.07
SCAF1-203ENST00000598359 ZNF579Q8NAF0 562 aaKnown RBP15.46■□□□□ 0.07
SCAF1-203ENST00000598359 CLP1Q92989 425 aaKnown RBP15.46■□□□□ 0.07
SCAF1-203ENST00000598359 CEP89Q96ST8 783 aa15.46■□□□□ 0.07
SCAF1-203ENST00000598359 WRAP73Q9P2S5 460 aaPredicted RBP15.46■□□□□ 0.07
SCAF1-203ENST00000598359 HCSTQ9UBK5 93 aa15.46■□□□□ 0.07
SCAF1-203ENST00000598359 GPR182O15218 404 aa15.45■□□□□ 0.06
SCAF1-203ENST00000598359 MARCH6O60337 910 aa15.45■□□□□ 0.06
SCAF1-203ENST00000598359 MMP1P03956 469 aa15.45■□□□□ 0.06
SCAF1-203ENST00000598359 STAG3L1P0CL83 205 aa15.45■□□□□ 0.06
SCAF1-203ENST00000598359 GCFC2P16383 781 aaKnown RBP15.45■□□□□ 0.06
SCAF1-203ENST00000598359 TMOD1P28289 359 aa15.45■□□□□ 0.06
SCAF1-203ENST00000598359 GPC3P51654 580 aa15.45■□□□□ 0.06
SCAF1-203ENST00000598359 NPEPPSP55786 919 aa15.45■□□□□ 0.06
SCAF1-203ENST00000598359 PPP2R5CQ13362 524 aa15.45■□□□□ 0.06
SCAF1-203ENST00000598359 TMEM31Q5JXX7 168 aa15.45■□□□□ 0.06
SCAF1-203ENST00000598359 FAM102BQ5T8I3 360 aa15.45■□□□□ 0.06
SCAF1-203ENST00000598359 NCAPH2Q6IBW4 605 aa15.45■□□□□ 0.06
SCAF1-203ENST00000598359 ANO5Q75V66 913 aa15.45■□□□□ 0.06
SCAF1-203ENST00000598359 DIS3L2Q8IYB7 885 aaKnown RBP15.45■□□□□ 0.06
SCAF1-203ENST00000598359 FAM20AQ96MK3 541 aa15.45■□□□□ 0.06
SCAF1-203ENST00000598359 SCLT1Q96NL6 688 aa15.45■□□□□ 0.06
SCAF1-203ENST00000598359 KIF2CQ99661 725 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms