RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 HMGB1P09429 215 aaKnown RBP11.97□□□□□ -0.49
CHMP2A-202ENST00000596708 CPA1P15085 419 aa11.97□□□□□ -0.49
CHMP2A-202ENST00000596708 GNA11P29992 359 aa11.97□□□□□ -0.49
CHMP2A-202ENST00000596708 SETQ01105 290 aaPredicted RBP11.97□□□□□ -0.49
CHMP2A-202ENST00000596708 AKAP17AQ02040 695 aaKnown RBP11.97□□□□□ -0.49
CHMP2A-202ENST00000596708 UBE3AQ05086 875 aa11.97□□□□□ -0.49
CHMP2A-202ENST00000596708 APOBRQ0VD83 1088 aa11.97□□□□□ -0.49
CHMP2A-202ENST00000596708 COASYQ13057 564 aa11.97□□□□□ -0.49
CHMP2A-202ENST00000596708 PRR16Q569H4 304 aa11.97□□□□□ -0.49
CHMP2A-202ENST00000596708 HERC4Q5GLZ8 1057 aaPredicted RBP11.97□□□□□ -0.49
CHMP2A-202ENST00000596708 MCTP2Q6DN12 878 aa11.97□□□□□ -0.49
CHMP2A-202ENST00000596708 ZNF746Q6NUN9 644 aaPredicted RBP11.97□□□□□ -0.49
CHMP2A-202ENST00000596708 Q6ZUG5 572 aa11.97□□□□□ -0.49
CHMP2A-202ENST00000596708 FAM228AQ86W67 206 aa11.97□□□□□ -0.49
CHMP2A-202ENST00000596708 SMAP1Q8IYB5 467 aaPredicted RBP11.97□□□□□ -0.49
CHMP2A-202ENST00000596708 COLGALT1Q8NBJ5 622 aa11.97□□□□□ -0.49
CHMP2A-202ENST00000596708 SMRP1Q8NCR6 262 aa11.97□□□□□ -0.49
CHMP2A-202ENST00000596708 FBXL18Q96ME1 805 aa11.97□□□□□ -0.49
CHMP2A-202ENST00000596708 ZMYND12Q9H0C1 365 aa11.97□□□□□ -0.49
CHMP2A-202ENST00000596708 TMEM161AQ9NX61 479 aa11.97□□□□□ -0.49
CHMP2A-202ENST00000596708 CEP131Q9UPN4 1083 aa11.97□□□□□ -0.49
CHMP2A-202ENST00000596708 AKT3Q9Y243 479 aa11.97□□□□□ -0.49
CHMP2A-202ENST00000596708 PCDHA10Q9Y5I2 948 aa11.97□□□□□ -0.49
CHMP2A-202ENST00000596708 MAFBQ9Y5Q3 323 aaPredicted RBP11.97□□□□□ -0.49
CHMP2A-202ENST00000596708 ESYT2A0FGR8 921 aa11.96□□□□□ -0.49
CHMP2A-202ENST00000596708 MAGEB2O15479 319 aa11.96□□□□□ -0.49
CHMP2A-202ENST00000596708 C22orf31O95567 290 aa11.96□□□□□ -0.49
CHMP2A-202ENST00000596708 GLP2RO95838 553 aa11.96□□□□□ -0.49
CHMP2A-202ENST00000596708 FGFR1P11362 822 aa11.96□□□□□ -0.49
CHMP2A-202ENST00000596708 ZSCAN20P17040 1043 aaPredicted RBP11.96□□□□□ -0.49
CHMP2A-202ENST00000596708 TMOD1P28289 359 aa11.96□□□□□ -0.49
CHMP2A-202ENST00000596708 RCAN1P53805 252 aa11.96□□□□□ -0.49
CHMP2A-202ENST00000596708 ERVFC1P60507 584 aa11.96□□□□□ -0.49
CHMP2A-202ENST00000596708 EFCAB12Q6NXP0 572 aa11.96□□□□□ -0.49
CHMP2A-202ENST00000596708 REXO1Q8N1G1 1221 aaKnown RBP11.96□□□□□ -0.49
CHMP2A-202ENST00000596708 CRYGNQ8WXF5 182 aa11.96□□□□□ -0.49
CHMP2A-202ENST00000596708 EDAQ92838 391 aa11.96□□□□□ -0.49
CHMP2A-202ENST00000596708 RPGRIP1Q96KN7 1286 aa11.96□□□□□ -0.49
CHMP2A-202ENST00000596708 MAP7D2Q96T17 732 aa11.96□□□□□ -0.49
CHMP2A-202ENST00000596708 KCNH6Q9H252 994 aa11.96□□□□□ -0.49
CHMP2A-202ENST00000596708 CWH43Q9H720 699 aa11.96□□□□□ -0.49
CHMP2A-202ENST00000596708 HCSTQ9UBK5 93 aa11.96□□□□□ -0.49
CHMP2A-202ENST00000596708 PUF60Q9UHX1 559 aaKnown RBP11.96□□□□□ -0.49
CHMP2A-202ENST00000596708 USP15Q9Y4E8 981 aaPredicted RBP11.96□□□□□ -0.49
CHMP2A-202ENST00000596708 ADAMTS3O15072 1205 aa11.95□□□□□ -0.5
CHMP2A-202ENST00000596708 PRPF3O43395 683 aaKnown RBP11.95□□□□□ -0.5
CHMP2A-202ENST00000596708 GPR32O75388 356 aa11.95□□□□□ -0.5
CHMP2A-202ENST00000596708 CDC45O75419 566 aa11.95□□□□□ -0.5
CHMP2A-202ENST00000596708 LAG3P18627 525 aa11.95□□□□□ -0.5
CHMP2A-202ENST00000596708 CLCN3P51790 818 aa11.95□□□□□ -0.5
CHMP2A-202ENST00000596708 NLRP11P59045 1033 aaKnown RBP11.95□□□□□ -0.5
CHMP2A-202ENST00000596708 FAM189BP81408 668 aa11.95□□□□□ -0.5
CHMP2A-202ENST00000596708 RBM10P98175 930 aaKnown RBP11.95□□□□□ -0.5
CHMP2A-202ENST00000596708 NHLH1Q02575 133 aa11.95□□□□□ -0.5
CHMP2A-202ENST00000596708 PKN1Q16512 942 aa11.95□□□□□ -0.5
CHMP2A-202ENST00000596708 PLPP4Q5VZY2 271 aa11.95□□□□□ -0.5
CHMP2A-202ENST00000596708 PDE12Q6L8Q7 609 aaKnown RBP11.95□□□□□ -0.5
CHMP2A-202ENST00000596708 ABI1Q8IZP0 508 aa11.95□□□□□ -0.5
CHMP2A-202ENST00000596708 BICD2Q8TD16 824 aa11.95□□□□□ -0.5
CHMP2A-202ENST00000596708 RASGRP4Q8TDF6 673 aa11.95□□□□□ -0.5
CHMP2A-202ENST00000596708 BRF1Q92994 677 aa11.95□□□□□ -0.5
CHMP2A-202ENST00000596708 ZNF668Q96K58 619 aaPredicted RBP11.95□□□□□ -0.5
CHMP2A-202ENST00000596708 FAM167AQ96KS9 214 aa11.95□□□□□ -0.5
CHMP2A-202ENST00000596708 CDCA3Q99618 268 aaPredicted RBP11.95□□□□□ -0.5
CHMP2A-202ENST00000596708 PHF7Q9BWX1 381 aaPredicted RBP11.95□□□□□ -0.5
CHMP2A-202ENST00000596708 TMEM117Q9H0C3 514 aa11.95□□□□□ -0.5
CHMP2A-202ENST00000596708 ELAC1Q9H777 363 aaKnown RBP11.95□□□□□ -0.5
CHMP2A-202ENST00000596708 NRBP2Q9NSY0 501 aa11.95□□□□□ -0.5
CHMP2A-202ENST00000596708 KMT2EQ8IZD2 1858 aa11.94□□□□□ -0.5
CHMP2A-202ENST00000596708 FSD2A1L4K1 749 aa11.94□□□□□ -0.5
CHMP2A-202ENST00000596708 LOC730098B7Z3J9 87 aa11.94□□□□□ -0.5
CHMP2A-202ENST00000596708 HOXA2O43364 376 aa11.94□□□□□ -0.5
CHMP2A-202ENST00000596708 SRGAP2BP0DMP2 458 aa11.94□□□□□ -0.5
CHMP2A-202ENST00000596708 TECP42680 631 aa11.94□□□□□ -0.5
CHMP2A-202ENST00000596708 MRE11P49959 708 aa11.94□□□□□ -0.5
CHMP2A-202ENST00000596708 DSC3Q14574 896 aa11.94□□□□□ -0.5
CHMP2A-202ENST00000596708 DUSP6Q16828 381 aa11.94□□□□□ -0.5
CHMP2A-202ENST00000596708 BLOC1S2Q6QNY1 142 aa11.94□□□□□ -0.5
CHMP2A-202ENST00000596708 TRIM67Q6ZTA4 783 aa11.94□□□□□ -0.5
CHMP2A-202ENST00000596708 CENPQQ7L2Z9 268 aaPredicted RBP11.94□□□□□ -0.5
CHMP2A-202ENST00000596708 LRRC71Q8N4P6 559 aa11.94□□□□□ -0.5
CHMP2A-202ENST00000596708 RNF169Q8NCN4 708 aa11.94□□□□□ -0.5
CHMP2A-202ENST00000596708 CCDC148Q8NFR7 591 aa11.94□□□□□ -0.5
CHMP2A-202ENST00000596708 MRPS27Q92552 414 aaKnown RBP11.94□□□□□ -0.5
CHMP2A-202ENST00000596708 PHKBQ93100 1093 aa11.94□□□□□ -0.5
CHMP2A-202ENST00000596708 PBXIP1Q96AQ6 731 aa11.94□□□□□ -0.5
CHMP2A-202ENST00000596708 JAKMIP1Q96N16 626 aaKnown RBP11.94□□□□□ -0.5
CHMP2A-202ENST00000596708 SCLT1Q96NL6 688 aa11.94□□□□□ -0.5
CHMP2A-202ENST00000596708 ENTPD7Q9NQZ7 604 aa11.94□□□□□ -0.5
CHMP2A-202ENST00000596708 TMEM221A6NGB7 291 aa11.93□□□□□ -0.5
CHMP2A-202ENST00000596708 WDR64B1ANS9 1081 aa11.93□□□□□ -0.5
CHMP2A-202ENST00000596708 M0R296 226 aa11.93□□□□□ -0.5
CHMP2A-202ENST00000596708 FSCN2O14926 492 aa11.93□□□□□ -0.5
CHMP2A-202ENST00000596708 CHMP2AO43633 222 aa11.93□□□□□ -0.5
CHMP2A-202ENST00000596708 EIF4BP23588 611 aaKnown RBP11.93□□□□□ -0.5
CHMP2A-202ENST00000596708 CIITAP33076 1130 aa11.93□□□□□ -0.5
CHMP2A-202ENST00000596708 ZXDAP98168 799 aa11.93□□□□□ -0.5
CHMP2A-202ENST00000596708 PLCB3Q01970 1234 aa11.93□□□□□ -0.5
CHMP2A-202ENST00000596708 KRT17Q04695 432 aa11.93□□□□□ -0.5
CHMP2A-202ENST00000596708 LLGL2Q6P1M3 1020 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms