RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 CCSER1Q9C0I3 900 aa21.54■■□□□ 1.04
PNKP-207ENST00000596014 DHX33Q9H6R0 707 aaKnown RBP21.54■■□□□ 1.04
PNKP-207ENST00000596014 RANBP2P49792 3224 aaKnown RBP21.54■■□□□ 1.04
PNKP-207ENST00000596014 LOXHD1Q8IVV2 1947 aa21.54■■□□□ 1.04
PNKP-207ENST00000596014 TANC1Q9C0D5 1861 aa21.54■■□□□ 1.04
PNKP-207ENST00000596014 RFC5P40937 340 aa21.53■■□□□ 1.04
PNKP-207ENST00000596014 CLCN3P51790 818 aa21.53■■□□□ 1.04
PNKP-207ENST00000596014 POLGP54098 1239 aaPredicted RBP21.53■■□□□ 1.04
PNKP-207ENST00000596014 NME8Q8N427 588 aa21.53■■□□□ 1.04
PNKP-207ENST00000596014 LEO1Q8WVC0 666 aaPredicted RBP21.53■■□□□ 1.04
PNKP-207ENST00000596014 SLC7A3Q8WY07 619 aa21.53■■□□□ 1.04
PNKP-207ENST00000596014 SYMPKQ92797 1274 aaKnown RBP21.53■■□□□ 1.04
PNKP-207ENST00000596014 CALML4Q96GE6 196 aa21.53■■□□□ 1.04
PNKP-207ENST00000596014 CDK5RAP3Q96JB5 506 aa21.53■■□□□ 1.04
PNKP-207ENST00000596014 SPATA32Q96LK8 384 aa21.53■■□□□ 1.04
PNKP-207ENST00000596014 PLIN2Q99541 437 aa21.53■■□□□ 1.04
PNKP-207ENST00000596014 NT5C3AQ9H0P0 336 aa21.53■■□□□ 1.04
PNKP-207ENST00000596014 DNM3Q9UQ16 869 aa21.53■■□□□ 1.04
PNKP-207ENST00000596014 RSPH10B2B2RC85 870 aa21.53■■□□□ 1.04
PNKP-207ENST00000596014 CUTAO60888 179 aa21.53■■□□□ 1.04
PNKP-207ENST00000596014 CTSHP09668 335 aa21.53■■□□□ 1.04
PNKP-207ENST00000596014 RSPH10BP0C881 870 aa21.53■■□□□ 1.04
PNKP-207ENST00000596014 CSF2RAP15509 400 aa21.53■■□□□ 1.04
PNKP-207ENST00000596014 TMOD1P28289 359 aa21.53■■□□□ 1.04
PNKP-207ENST00000596014 MAGEA10P43363 369 aaPredicted RBP21.53■■□□□ 1.04
PNKP-207ENST00000596014 ME1P48163 572 aa21.53■■□□□ 1.04
PNKP-207ENST00000596014 MKRN4PQ13434 485 aaPredicted RBP21.53■■□□□ 1.04
PNKP-207ENST00000596014 AXDND1Q5T1B0 1012 aaPredicted RBP21.53■■□□□ 1.04
PNKP-207ENST00000596014 KCNK18Q7Z418 384 aa21.53■■□□□ 1.04
PNKP-207ENST00000596014 EXOC8Q8IYI6 725 aa21.53■■□□□ 1.04
PNKP-207ENST00000596014 KCTD17Q8N5Z5 321 aa21.53■■□□□ 1.04
PNKP-207ENST00000596014 JPH2Q9BR39 696 aaPredicted RBP21.53■■□□□ 1.04
PNKP-207ENST00000596014 PCDHA7Q9UN72 937 aa21.53■■□□□ 1.04
PNKP-207ENST00000596014 E9PMD0 336 aa21.52■■□□□ 1.04
PNKP-207ENST00000596014 CHRNA1P02708 482 aa21.52■■□□□ 1.04
PNKP-207ENST00000596014 TMEM62Q0P6H9 643 aa21.52■■□□□ 1.04
PNKP-207ENST00000596014 DRP2Q13474 957 aa21.52■■□□□ 1.04
PNKP-207ENST00000596014 TMEM119Q4V9L6 283 aa21.52■■□□□ 1.04
PNKP-207ENST00000596014 FAM26DQ5JW98 314 aa21.52■■□□□ 1.04
PNKP-207ENST00000596014 SCAND2PQ9GZW5 306 aaPredicted RBP21.52■■□□□ 1.04
PNKP-207ENST00000596014 BHMT2Q9H2M3 363 aa21.52■■□□□ 1.04
PNKP-207ENST00000596014 TET1Q8NFU7 2136 aa21.52■■□□□ 1.03
PNKP-207ENST00000596014 DGAT1O75907 488 aa21.51■■□□□ 1.03
PNKP-207ENST00000596014 EYA4O95677 639 aa21.51■■□□□ 1.03
PNKP-207ENST00000596014 MRPS6P82932 125 aaKnown RBP21.51■■□□□ 1.03
PNKP-207ENST00000596014 FPGSQ05932 587 aa21.51■■□□□ 1.03
PNKP-207ENST00000596014 EMC2Q15006 297 aa21.51■■□□□ 1.03
PNKP-207ENST00000596014 KARSQ15046 597 aaKnown RBP21.51■■□□□ 1.03
PNKP-207ENST00000596014 IER5Q5VY09 327 aa21.51■■□□□ 1.03
PNKP-207ENST00000596014 BMP2KQ9NSY1 1161 aaPredicted RBP21.51■■□□□ 1.03
PNKP-207ENST00000596014 DNM2P50570 870 aa21.5■■□□□ 1.03
PNKP-207ENST00000596014 MGAT3Q09327 533 aa21.5■■□□□ 1.03
PNKP-207ENST00000596014 MBTPS1Q14703 1052 aa21.5■■□□□ 1.03
PNKP-207ENST00000596014 GPNMBQ14956 572 aa21.5■■□□□ 1.03
PNKP-207ENST00000596014 RASSF8Q8NHQ8 419 aa21.5■■□□□ 1.03
PNKP-207ENST00000596014 MAP7D2Q96T17 732 aa21.5■■□□□ 1.03
PNKP-207ENST00000596014 GDF15Q99988 308 aa21.5■■□□□ 1.03
PNKP-207ENST00000596014 SIP14410 1827 aa21.5■■□□□ 1.03
PNKP-207ENST00000596014 ARHGEF35A5YM69 484 aa21.5■■□□□ 1.03
PNKP-207ENST00000596014 PARNO95453 639 aaKnown RBP21.5■■□□□ 1.03
PNKP-207ENST00000596014 VTNP04004 478 aa21.5■■□□□ 1.03
PNKP-207ENST00000596014 RFC2P35250 354 aa21.5■■□□□ 1.03
PNKP-207ENST00000596014 TXLNAP40222 546 aa21.5■■□□□ 1.03
PNKP-207ENST00000596014 SHC4Q6S5L8 630 aa21.5■■□□□ 1.03
PNKP-207ENST00000596014 PADI6Q6TGC4 694 aa21.5■■□□□ 1.03
PNKP-207ENST00000596014 VWCEQ96DN2 955 aa21.5■■□□□ 1.03
PNKP-207ENST00000596014 XPNPEP1Q9NQW7 623 aa21.5■■□□□ 1.03
PNKP-207ENST00000596014 SUCLA2Q9P2R7 463 aaPredicted RBP21.5■■□□□ 1.03
PNKP-207ENST00000596014 CCDC39Q9UFE4 941 aa21.5■■□□□ 1.03
PNKP-207ENST00000596014 AKT3Q9Y243 479 aa21.5■■□□□ 1.03
PNKP-207ENST00000596014 CDY2AQ9Y6F7 541 aa21.5■■□□□ 1.03
PNKP-207ENST00000596014 GAS2O43903 313 aaKnown RBP21.49■■□□□ 1.03
PNKP-207ENST00000596014 PLCG1P19174 1290 aa21.49■■□□□ 1.03
PNKP-207ENST00000596014 PPIGQ13427 754 aaKnown RBP eCLIP21.49■■□□□ 1.035e-7■■■■□ 22.6
PNKP-207ENST00000596014 LRRC15Q8TF66 581 aa21.49■■□□□ 1.03
PNKP-207ENST00000596014 TMEM143Q96AN5 459 aa21.49■■□□□ 1.03
PNKP-207ENST00000596014 MTRQ99707 1265 aa21.49■■□□□ 1.03
PNKP-207ENST00000596014 CELF4Q9BZC1 486 aaKnown RBP21.49■■□□□ 1.03
PNKP-207ENST00000596014 ATP6V0A4Q9HBG4 840 aa21.49■■□□□ 1.03
PNKP-207ENST00000596014 GDPD2Q9HCC8 539 aa21.49■■□□□ 1.03
PNKP-207ENST00000596014 M0QZ92 97 aa21.48■■□□□ 1.03
PNKP-207ENST00000596014 USO1O60763 962 aaKnown RBP21.48■■□□□ 1.03
PNKP-207ENST00000596014 NBNO60934 754 aa21.48■■□□□ 1.03
PNKP-207ENST00000596014 EPHB4P54760 987 aa21.48■■□□□ 1.03
PNKP-207ENST00000596014 C16orf59Q7L2K0 433 aa21.48■■□□□ 1.03
PNKP-207ENST00000596014 DEFB128Q7Z7B8 93 aa21.48■■□□□ 1.03
PNKP-207ENST00000596014 RPUSD2Q8IZ73 545 aaKnown RBP21.48■■□□□ 1.03
PNKP-207ENST00000596014 OSBPL7Q9BZF2 842 aa21.48■■□□□ 1.03
PNKP-207ENST00000596014 IL23AQ9NPF7 189 aa21.48■■□□□ 1.03
PNKP-207ENST00000596014 TRPV2Q9Y5S1 764 aa21.48■■□□□ 1.03
PNKP-207ENST00000596014 GPR32O75388 356 aa21.47■■□□□ 1.03
PNKP-207ENST00000596014 ACRP10323 421 aa21.47■■□□□ 1.03
PNKP-207ENST00000596014 CYP11B2P19099 503 aa21.47■■□□□ 1.03
PNKP-207ENST00000596014 NLRP11P59045 1033 aaKnown RBP21.47■■□□□ 1.03
PNKP-207ENST00000596014 KIZQ2M2Z5 673 aa21.47■■□□□ 1.03
PNKP-207ENST00000596014 PRPF38BQ5VTL8 546 aaKnown RBP21.47■■□□□ 1.03
PNKP-207ENST00000596014 TCP11Q8WWU5 503 aa21.47■■□□□ 1.03
PNKP-207ENST00000596014 PANK2Q9BZ23 570 aa21.47■■□□□ 1.03
PNKP-207ENST00000596014 CDHR5Q9HBB8 845 aa21.47■■□□□ 1.03
PNKP-207ENST00000596014 BLOC1S4Q9NUP1 217 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms