RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 DYNC1LI2O43237 492 aaPredicted RBP14.49□□□□□ -0.09
SHKBP1-209ENST00000595803 RHOBTB3O94955 611 aa14.49□□□□□ -0.09
SHKBP1-209ENST00000595803 COL6A1P12109 1028 aa14.49□□□□□ -0.09
SHKBP1-209ENST00000595803 GIT2Q14161 759 aa14.49□□□□□ -0.09
SHKBP1-209ENST00000595803 DPCR1Q3MIW9 517 aa14.49□□□□□ -0.09
SHKBP1-209ENST00000595803 CT47A1Q5JQC4 288 aaPredicted RBP14.49□□□□□ -0.09
SHKBP1-209ENST00000595803 PADI6Q6TGC4 694 aa14.49□□□□□ -0.09
SHKBP1-209ENST00000595803 C1orf186Q6ZWK4 172 aa14.49□□□□□ -0.09
SHKBP1-209ENST00000595803 PLPPR4Q7Z2D5 763 aa14.49□□□□□ -0.09
SHKBP1-209ENST00000595803 FAM200AQ8TCP9 573 aa14.49□□□□□ -0.09
SHKBP1-209ENST00000595803 AFAP1L1Q8TED9 768 aa14.49□□□□□ -0.09
SHKBP1-209ENST00000595803 EMID1Q96A84 441 aaPredicted RBP14.49□□□□□ -0.09
SHKBP1-209ENST00000595803 DNAJC19Q96DA6 116 aa14.49□□□□□ -0.09
SHKBP1-209ENST00000595803 CEP170P1Q96L14 293 aa14.49□□□□□ -0.09
SHKBP1-209ENST00000595803 LBHD1Q9BQE6 289 aaPredicted RBP14.49□□□□□ -0.09
SHKBP1-209ENST00000595803 SMARCAD1Q9H4L7 1026 aa14.49□□□□□ -0.09
SHKBP1-209ENST00000595803 SEPT9Q9UHD8 586 aaPredicted RBP14.49□□□□□ -0.09
SHKBP1-209ENST00000595803 LTBP2Q14767 1821 aa14.48□□□□□ -0.09
SHKBP1-209ENST00000595803 FSD2A1L4K1 749 aa14.48□□□□□ -0.09
SHKBP1-209ENST00000595803 SMTNL1A8MU46 457 aa14.48□□□□□ -0.09
SHKBP1-209ENST00000595803 BECN2A8MW95 431 aa14.48□□□□□ -0.09
SHKBP1-209ENST00000595803 ZNF862O60290 1169 aa14.48□□□□□ -0.09
SHKBP1-209ENST00000595803 TBCAO75347 108 aaKnown RBP14.48□□□□□ -0.09
SHKBP1-209ENST00000595803 LGR5O75473 907 aa14.48□□□□□ -0.09
SHKBP1-209ENST00000595803 FAM13AO94988 1023 aa14.48□□□□□ -0.09
SHKBP1-209ENST00000595803 STBD1O95210 358 aa14.48□□□□□ -0.09
SHKBP1-209ENST00000595803 IGHA2P01877 340 aa14.48□□□□□ -0.09
SHKBP1-209ENST00000595803 OATP04181 439 aa14.48□□□□□ -0.09
SHKBP1-209ENST00000595803 BMP6P22004 513 aa14.48□□□□□ -0.09
SHKBP1-209ENST00000595803 RARRES1P49788 294 aa14.48□□□□□ -0.09
SHKBP1-209ENST00000595803 MRE11P49959 708 aa14.48□□□□□ -0.09
SHKBP1-209ENST00000595803 PRKCEQ02156 737 aa14.48□□□□□ -0.09
SHKBP1-209ENST00000595803 RAD51AP2Q09MP3 1159 aa14.48□□□□□ -0.09
SHKBP1-209ENST00000595803 STIM1Q13586 685 aa14.48□□□□□ -0.09
SHKBP1-209ENST00000595803 HERC4Q5GLZ8 1057 aaPredicted RBP14.48□□□□□ -0.09
SHKBP1-209ENST00000595803 GJC2Q5T442 439 aaPredicted RBP14.48□□□□□ -0.09
SHKBP1-209ENST00000595803 L1TD1Q5T7N2 865 aaKnown RBP14.48□□□□□ -0.09
SHKBP1-209ENST00000595803 C11orf57Q6ZUT1 292 aaPredicted RBP14.48□□□□□ -0.09
SHKBP1-209ENST00000595803 PPTC7Q8NI37 304 aa14.48□□□□□ -0.09
SHKBP1-209ENST00000595803 AFG1LQ8WV93 481 aa14.48□□□□□ -0.09
SHKBP1-209ENST00000595803 PCYT2Q99447 389 aa14.48□□□□□ -0.09
SHKBP1-209ENST00000595803 RUSC1Q9BVN2 902 aa14.48□□□□□ -0.09
SHKBP1-209ENST00000595803 AP5M1Q9H0R1 490 aa14.48□□□□□ -0.09
SHKBP1-209ENST00000595803 GRPEL1Q9HAV7 217 aa14.48□□□□□ -0.09
SHKBP1-209ENST00000595803 CBX8Q9HC52 389 aa14.48□□□□□ -0.09
SHKBP1-209ENST00000595803 Q9Y3F1 56 aa14.48□□□□□ -0.09
SHKBP1-209ENST00000595803 IGSF9BQ9UPX0 1349 aa14.47□□□□□ -0.09
SHKBP1-209ENST00000595803 PPFIA4O75335 1185 aa14.47□□□□□ -0.09
SHKBP1-209ENST00000595803 GAP43P17677 238 aa14.47□□□□□ -0.09
SHKBP1-209ENST00000595803 ATP4AP20648 1035 aa14.47□□□□□ -0.09
SHKBP1-209ENST00000595803 GUCY2CP25092 1073 aa14.47□□□□□ -0.09
SHKBP1-209ENST00000595803 CNGA1P29973 690 aa14.47□□□□□ -0.09
SHKBP1-209ENST00000595803 PPP1R2P41236 205 aa14.47□□□□□ -0.09
SHKBP1-209ENST00000595803 NPEPPSP55786 919 aa14.47□□□□□ -0.09
SHKBP1-209ENST00000595803 CACNB1Q02641 598 aaPredicted RBP14.47□□□□□ -0.09
SHKBP1-209ENST00000595803 UVSSAQ2YD98 709 aa14.47□□□□□ -0.09
SHKBP1-209ENST00000595803 BRDTQ58F21 947 aaPredicted RBP14.47□□□□□ -0.09
SHKBP1-209ENST00000595803 PLA2G4FQ68DD2 849 aa14.47□□□□□ -0.09
SHKBP1-209ENST00000595803 ANO5Q75V66 913 aa14.47□□□□□ -0.09
SHKBP1-209ENST00000595803 TRIB2Q92519 343 aa14.47□□□□□ -0.09
SHKBP1-209ENST00000595803 FAM167AQ96KS9 214 aa14.47□□□□□ -0.09
SHKBP1-209ENST00000595803 BPIFA3Q9BQP9 254 aa14.47□□□□□ -0.09
SHKBP1-209ENST00000595803 REEP2Q9BRK0 252 aa14.47□□□□□ -0.09
SHKBP1-209ENST00000595803 TIPINQ9BVW5 301 aa14.47□□□□□ -0.09
SHKBP1-209ENST00000595803 NIFKQ9BYG3 293 aaKnown RBP14.47□□□□□ -0.09
SHKBP1-209ENST00000595803 GDAQ9Y2T3 454 aa14.47□□□□□ -0.09
SHKBP1-209ENST00000595803 COL4A3BPQ9Y5P4 624 aa14.47□□□□□ -0.09
SHKBP1-209ENST00000595803 BDP1A6H8Y1 2624 aa14.47□□□□□ -0.09
SHKBP1-209ENST00000595803 TMEM150BA6NC51 233 aa14.46□□□□□ -0.09
SHKBP1-209ENST00000595803 GOLGA6L19H0YKK7 550 aa14.46□□□□□ -0.09
SHKBP1-209ENST00000595803 AKR1A1P14550 325 aa14.46□□□□□ -0.09
SHKBP1-209ENST00000595803 PTGS1P23219 599 aa14.46□□□□□ -0.09
SHKBP1-209ENST00000595803 ERCC5P28715 1186 aaPredicted RBP14.46□□□□□ -0.09
SHKBP1-209ENST00000595803 SLC26A2P50443 739 aa14.46□□□□□ -0.09
SHKBP1-209ENST00000595803 COASYQ13057 564 aa14.46□□□□□ -0.09
SHKBP1-209ENST00000595803 DGKDQ16760 1214 aa14.46□□□□□ -0.09
SHKBP1-209ENST00000595803 MTERF2Q49AM1 385 aa14.46□□□□□ -0.09
SHKBP1-209ENST00000595803 MAEAQ7L5Y9 396 aa14.46□□□□□ -0.09
SHKBP1-209ENST00000595803 MYCT1Q8N699 235 aa14.46□□□□□ -0.09
SHKBP1-209ENST00000595803 BBXQ8WY36 941 aaPredicted RBP14.46□□□□□ -0.09
SHKBP1-209ENST00000595803 SH2D3AQ9BRG2 576 aa14.46□□□□□ -0.09
SHKBP1-209ENST00000595803 SLC39A2Q9NP94 309 aa14.46□□□□□ -0.09
SHKBP1-209ENST00000595803 CYP26B1Q9NR63 512 aa14.46□□□□□ -0.09
SHKBP1-209ENST00000595803 ODF2LQ9ULJ1 636 aa14.46□□□□□ -0.09
SHKBP1-209ENST00000595803 GNEQ9Y223 722 aaKnown RBP14.46□□□□□ -0.09
SHKBP1-209ENST00000595803 EMSYQ7Z589 1322 aa14.45□□□□□ -0.1
SHKBP1-209ENST00000595803 SFI1A8K8P3 1242 aa14.45□□□□□ -0.1
SHKBP1-209ENST00000595803 PPP1R3GB7ZBB8 358 aa14.45□□□□□ -0.1
SHKBP1-209ENST00000595803 USO1O60763 962 aaKnown RBP14.45□□□□□ -0.1
SHKBP1-209ENST00000595803 PRCPP42785 496 aa14.45□□□□□ -0.1
SHKBP1-209ENST00000595803 TPM4P67936 248 aa14.45□□□□□ -0.1
SHKBP1-209ENST00000595803 SMAD3P84022 425 aaKnown RBP14.45□□□□□ -0.1
SHKBP1-209ENST00000595803 STK4Q13043 487 aa14.45□□□□□ -0.1
SHKBP1-209ENST00000595803 FAM26FQ5R3K3 315 aa14.45□□□□□ -0.1
SHKBP1-209ENST00000595803 KLHL10Q6JEL2 608 aa14.45□□□□□ -0.1
SHKBP1-209ENST00000595803 TLK2Q86UE8 772 aa14.45□□□□□ -0.1
SHKBP1-209ENST00000595803 SMYD4Q8IYR2 804 aaPredicted RBP14.45□□□□□ -0.1
SHKBP1-209ENST00000595803 TRPV1Q8NER1 839 aa14.45□□□□□ -0.1
SHKBP1-209ENST00000595803 POLD4Q9HCU8 107 aa14.45□□□□□ -0.1
SHKBP1-209ENST00000595803 ERAP1Q9NZ08 941 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms