RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 CAMK1Q14012 370 aa19.23■□□□□ 0.67
CCDC9-202ENST00000595659 NPY5RQ15761 445 aa19.23■□□□□ 0.67
CCDC9-202ENST00000595659 CPLX2Q6PUV4 134 aaKnown RBP19.23■□□□□ 0.67
CCDC9-202ENST00000595659 KLHL23Q8NBE8 558 aa19.23■□□□□ 0.67
CCDC9-202ENST00000595659 FAM167AQ96KS9 214 aa19.23■□□□□ 0.67
CCDC9-202ENST00000595659 PLVAPQ9BX97 442 aa19.23■□□□□ 0.67
CCDC9-202ENST00000595659 RGS18Q9NS28 235 aa19.23■□□□□ 0.67
CCDC9-202ENST00000595659 HCSTQ9UBK5 93 aa19.23■□□□□ 0.67
CCDC9-202ENST00000595659 KAT6AQ92794 2004 aa19.22■□□□□ 0.67
CCDC9-202ENST00000595659 TMEM150BA6NC51 233 aa19.22■□□□□ 0.67
CCDC9-202ENST00000595659 M0R2N6 131 aa19.22■□□□□ 0.67
CCDC9-202ENST00000595659 MAGEB2O15479 319 aa19.22■□□□□ 0.67
CCDC9-202ENST00000595659 PSMD10O75832 226 aa19.22■□□□□ 0.67
CCDC9-202ENST00000595659 ITGB1P05556 798 aa19.22■□□□□ 0.67
CCDC9-202ENST00000595659 LTBRP36941 435 aa19.22■□□□□ 0.67
CCDC9-202ENST00000595659 DLX2Q07687 328 aaPredicted RBP19.22■□□□□ 0.67
CCDC9-202ENST00000595659 SCRN1Q12765 414 aa19.22■□□□□ 0.67
CCDC9-202ENST00000595659 Q4G0T1 1027 aa19.22■□□□□ 0.67
CCDC9-202ENST00000595659 SPOUT1Q5T280 376 aaKnown RBP19.22■□□□□ 0.67
CCDC9-202ENST00000595659 FAM178BQ8IXR5 827 aa19.22■□□□□ 0.67
CCDC9-202ENST00000595659 SPPL3Q8TCT6 385 aa19.22■□□□□ 0.67
CCDC9-202ENST00000595659 MAP7D2Q96T17 732 aa19.22■□□□□ 0.67
CCDC9-202ENST00000595659 SH2D3AQ9BRG2 576 aa19.22■□□□□ 0.67
CCDC9-202ENST00000595659 GJB4Q9NTQ9 266 aa19.22■□□□□ 0.67
CCDC9-202ENST00000595659 C9IYK1 514 aa19.21■□□□□ 0.67
CCDC9-202ENST00000595659 LINC01565O15544 149 aa19.21■□□□□ 0.67
CCDC9-202ENST00000595659 MMP1P03956 469 aa19.21■□□□□ 0.67
CCDC9-202ENST00000595659 FGFR1P11362 822 aa19.21■□□□□ 0.67
CCDC9-202ENST00000595659 SFNP31947 248 aa19.21■□□□□ 0.67
CCDC9-202ENST00000595659 SSTR3P32745 418 aaPredicted RBP19.21■□□□□ 0.67
CCDC9-202ENST00000595659 IRS1P35568 1242 aa19.21■□□□□ 0.67
CCDC9-202ENST00000595659 JAK3P52333 1124 aa19.21■□□□□ 0.67
CCDC9-202ENST00000595659 INF2Q27J81 1249 aa19.21■□□□□ 0.67
CCDC9-202ENST00000595659 SLC24A5Q71RS6 500 aa19.21■□□□□ 0.67
CCDC9-202ENST00000595659 MIER3Q7Z3K6 550 aa19.21■□□□□ 0.67
CCDC9-202ENST00000595659 GJD3Q8N144 294 aa19.21■□□□□ 0.67
CCDC9-202ENST00000595659 C22orf23Q9BZE7 217 aa19.21■□□□□ 0.67
CCDC9-202ENST00000595659 ADAMTS10Q9H324 1103 aa19.21■□□□□ 0.67
CCDC9-202ENST00000595659 C1orf112Q9NSG2 853 aa19.21■□□□□ 0.67
CCDC9-202ENST00000595659 TPCN1Q9ULQ1 816 aa19.21■□□□□ 0.67
CCDC9-202ENST00000595659 PCDHGC5Q9Y5F6 944 aa19.21■□□□□ 0.67
CCDC9-202ENST00000595659 CYP3A7-CYP3A51PA0A087WV96 503 aa19.2■□□□□ 0.66
CCDC9-202ENST00000595659 CSDE1O75534 798 aaKnown RBP19.2■□□□□ 0.66
CCDC9-202ENST00000595659 FGFR4P22455 802 aa19.2■□□□□ 0.66
CCDC9-202ENST00000595659 CYP3A7P24462 503 aa19.2■□□□□ 0.66
CCDC9-202ENST00000595659 TMOD1P28289 359 aa19.2■□□□□ 0.66
CCDC9-202ENST00000595659 DRP2Q13474 957 aa19.2■□□□□ 0.66
CCDC9-202ENST00000595659 DSC3Q14574 896 aa19.2■□□□□ 0.66
CCDC9-202ENST00000595659 COL19A1Q14993 1142 aa19.2■□□□□ 0.66
CCDC9-202ENST00000595659 MTERF2Q49AM1 385 aa19.2■□□□□ 0.66
CCDC9-202ENST00000595659 ODR4Q5SWX8 454 aa19.2■□□□□ 0.66
CCDC9-202ENST00000595659 LINC01465Q8N7H1 131 aa19.2■□□□□ 0.66
CCDC9-202ENST00000595659 POF1BQ8WVV4 589 aa19.2■□□□□ 0.66
CCDC9-202ENST00000595659 P2RX5Q93086 422 aa19.2■□□□□ 0.66
CCDC9-202ENST00000595659 SCLT1Q96NL6 688 aa19.2■□□□□ 0.66
CCDC9-202ENST00000595659 C1QTNF1Q9BXJ1 281 aa19.2■□□□□ 0.66
CCDC9-202ENST00000595659 SLKQ9H2G2 1235 aaPredicted RBP19.2■□□□□ 0.66
CCDC9-202ENST00000595659 SEPT9Q9UHD8 586 aaPredicted RBP19.2■□□□□ 0.66
CCDC9-202ENST00000595659 FAM86C2PA6NEL3 165 aa19.19■□□□□ 0.66
CCDC9-202ENST00000595659 SLC37A4O43826 429 aa19.19■□□□□ 0.66
CCDC9-202ENST00000595659 TBC1D8BQ0IIM8 1120 aa19.19■□□□□ 0.66
CCDC9-202ENST00000595659 NONOQ15233 471 aaKnown RBP eCLIP19.19■□□□□ 0.66
CCDC9-202ENST00000595659 CTC1Q2NKJ3 1217 aa19.19■□□□□ 0.66
CCDC9-202ENST00000595659 LETM2Q2VYF4 491 aa19.19■□□□□ 0.66
CCDC9-202ENST00000595659 PUS10Q3MIT2 529 aaKnown RBP19.19■□□□□ 0.66
CCDC9-202ENST00000595659 ADGRD2Q7Z7M1 963 aa19.19■□□□□ 0.66
CCDC9-202ENST00000595659 DAGLBQ8NCG7 672 aa19.19■□□□□ 0.66
CCDC9-202ENST00000595659 ATP6V0A4Q9HBG4 840 aa19.19■□□□□ 0.66
CCDC9-202ENST00000595659 TYW1Q9NV66 732 aaKnown RBP19.19■□□□□ 0.66
CCDC9-202ENST00000595659 DDX25Q9UHL0 483 aaKnown RBP19.19■□□□□ 0.66
CCDC9-202ENST00000595659 EIF4BP23588 611 aaKnown RBP19.18■□□□□ 0.66
CCDC9-202ENST00000595659 FAM189BP81408 668 aa19.18■□□□□ 0.66
CCDC9-202ENST00000595659 GALNT17Q6IS24 598 aa19.18■□□□□ 0.66
CCDC9-202ENST00000595659 KRT25Q7Z3Z0 450 aa19.18■□□□□ 0.66
CCDC9-202ENST00000595659 RBM23Q86U06 439 aaKnown RBP19.18■□□□□ 0.66
CCDC9-202ENST00000595659 RNF169Q8NCN4 708 aa19.18■□□□□ 0.66
CCDC9-202ENST00000595659 ETNPPLQ8TBG4 499 aa19.18■□□□□ 0.66
CCDC9-202ENST00000595659 OXER1Q8TDS5 423 aa19.18■□□□□ 0.66
CCDC9-202ENST00000595659 TMEM161AQ9NX61 479 aa19.18■□□□□ 0.66
CCDC9-202ENST00000595659 TTC3P53804 2025 aa19.18■□□□□ 0.66
CCDC9-202ENST00000595659 DDX11L8A8MPP1 907 aa19.17■□□□□ 0.66
CCDC9-202ENST00000595659 NCK2O43639 380 aa19.17■□□□□ 0.66
CCDC9-202ENST00000595659 TBX10O75333 385 aa19.17■□□□□ 0.66
CCDC9-202ENST00000595659 CDKL5O76039 1030 aa19.17■□□□□ 0.66
CCDC9-202ENST00000595659 STBD1O95210 358 aa19.17■□□□□ 0.66
CCDC9-202ENST00000595659 GPC3P51654 580 aa19.17■□□□□ 0.66
CCDC9-202ENST00000595659 TARBP2Q15633 366 aaKnown RBP19.17■□□□□ 0.66
CCDC9-202ENST00000595659 NAALADL2Q58DX5 795 aa19.17■□□□□ 0.66
CCDC9-202ENST00000595659 B3GNT9Q6UX72 402 aa19.17■□□□□ 0.66
CCDC9-202ENST00000595659 NECAB1Q8N987 351 aa19.17■□□□□ 0.66
CCDC9-202ENST00000595659 MICAL1Q8TDZ2 1067 aa19.17■□□□□ 0.66
CCDC9-202ENST00000595659 NLRP7Q8WX94 980 aa19.17■□□□□ 0.66
CCDC9-202ENST00000595659 MBOAT7Q96N66 472 aa19.17■□□□□ 0.66
CCDC9-202ENST00000595659 LRFN3Q9BTN0 628 aa19.17■□□□□ 0.66
CCDC9-202ENST00000595659 PHF20Q9BVI0 1012 aa19.17■□□□□ 0.66
CCDC9-202ENST00000595659 PCDHB12Q9Y5F1 795 aa19.17■□□□□ 0.66
CCDC9-202ENST00000595659 CCDC194A0A1B0GVG4 234 aa19.16■□□□□ 0.66
CCDC9-202ENST00000595659 EML1O00423 815 aa19.16■□□□□ 0.66
CCDC9-202ENST00000595659 PFKFB2O60825 505 aa19.16■□□□□ 0.66
CCDC9-202ENST00000595659 CTDNEP1O95476 244 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms