RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 TMEM87BQ96K49 555 aa14.57□□□□□ -0.08
SCAF1-202ENST00000595242 LRRC2Q9BYS8 371 aa14.57□□□□□ -0.08
SCAF1-202ENST00000595242 CNNM2Q9H8M5 875 aa14.57□□□□□ -0.08
SCAF1-202ENST00000595242 DLL3Q9NYJ7 618 aa14.57□□□□□ -0.08
SCAF1-202ENST00000595242 PADI3Q9ULW8 664 aa14.57□□□□□ -0.08
SCAF1-202ENST00000595242 BAHCC1Q9P281 2608 aa14.57□□□□□ -0.08
SCAF1-202ENST00000595242 CACNA1IQ9P0X4 2223 aa14.56□□□□□ -0.08
SCAF1-202ENST00000595242 SPATA31C2B4DYI2 1134 aa14.56□□□□□ -0.08
SCAF1-202ENST00000595242 SH2B2O14492 632 aaPredicted RBP14.56□□□□□ -0.08
SCAF1-202ENST00000595242 PRPF40AO75400 957 aaKnown RBP14.56□□□□□ -0.08
SCAF1-202ENST00000595242 CTDNEP1O95476 244 aa14.56□□□□□ -0.08
SCAF1-202ENST00000595242 NPR3P17342 541 aa14.56□□□□□ -0.08
SCAF1-202ENST00000595242 SP4Q02446 784 aa14.56□□□□□ -0.08
SCAF1-202ENST00000595242 ITIH3Q06033 890 aa14.56□□□□□ -0.08
SCAF1-202ENST00000595242 STK3Q13188 491 aa14.56□□□□□ -0.08
SCAF1-202ENST00000595242 TPRNQ4KMQ1 711 aa14.56□□□□□ -0.08
SCAF1-202ENST00000595242 L1TD1Q5T7N2 865 aaKnown RBP14.56□□□□□ -0.08
SCAF1-202ENST00000595242 FOXD4L5Q5VV16 416 aaPredicted RBP14.56□□□□□ -0.08
SCAF1-202ENST00000595242 IER5Q5VY09 327 aa14.56□□□□□ -0.08
SCAF1-202ENST00000595242 FCHSD1Q86WN1 690 aa14.56□□□□□ -0.08
SCAF1-202ENST00000595242 SAMD3Q8N6K7 520 aa14.56□□□□□ -0.08
SCAF1-202ENST00000595242 FOXD4L4Q8WXT5 416 aaPredicted RBP14.56□□□□□ -0.08
SCAF1-202ENST00000595242 TCF25Q9BQ70 676 aa14.56□□□□□ -0.08
SCAF1-202ENST00000595242 HINFPQ9BQA5 517 aa14.56□□□□□ -0.08
SCAF1-202ENST00000595242 ADAM7Q9H2U9 754 aa14.56□□□□□ -0.08
SCAF1-202ENST00000595242 KIF3AQ9Y496 699 aa14.56□□□□□ -0.08
SCAF1-202ENST00000595242 PCDHB7Q9Y5E2 793 aa14.56□□□□□ -0.08
SCAF1-202ENST00000595242 PCDHA1Q9Y5I3 950 aa14.56□□□□□ -0.08
SCAF1-202ENST00000595242 SQORQ9Y6N5 450 aa14.56□□□□□ -0.08
SCAF1-202ENST00000595242 NEDD4P46934 1319 aa14.56□□□□□ -0.08
SCAF1-202ENST00000595242 C2orf16Q68DN1 1984 aa14.56□□□□□ -0.08
SCAF1-202ENST00000595242 CHD6Q8TD26 2715 aa14.56□□□□□ -0.08
SCAF1-202ENST00000595242 MBLAC1A4D2B0 266 aaPredicted RBP14.55□□□□□ -0.08
SCAF1-202ENST00000595242 TBKBP1A7MCY6 615 aa14.55□□□□□ -0.08
SCAF1-202ENST00000595242 HIDE1A8MVS5 230 aa14.55□□□□□ -0.08
SCAF1-202ENST00000595242 PARP1P09874 1014 aaKnown RBP14.55□□□□□ -0.08
SCAF1-202ENST00000595242 PCP11498 1178 aaKnown RBP14.55□□□□□ -0.08
SCAF1-202ENST00000595242 ZNF445P59923 1031 aa14.55□□□□□ -0.08
SCAF1-202ENST00000595242 MRPS9P82933 396 aaKnown RBP14.55□□□□□ -0.08
SCAF1-202ENST00000595242 PAK2Q13177 524 aa14.55□□□□□ -0.08
SCAF1-202ENST00000595242 SEMA3FQ13275 785 aa14.55□□□□□ -0.08
SCAF1-202ENST00000595242 GRIK4Q16099 956 aa14.55□□□□□ -0.08
SCAF1-202ENST00000595242 MARCH8Q5T0T0 291 aa14.55□□□□□ -0.08
SCAF1-202ENST00000595242 SGMS1Q86VZ5 419 aa14.55□□□□□ -0.08
SCAF1-202ENST00000595242 ZDHHC14Q8IZN3 488 aa14.55□□□□□ -0.08
SCAF1-202ENST00000595242 TDRD5Q8NAT2 981 aaKnown RBP14.55□□□□□ -0.08
SCAF1-202ENST00000595242 COLGALT1Q8NBJ5 622 aa14.55□□□□□ -0.08
SCAF1-202ENST00000595242 CYP2W1Q8TAV3 490 aa14.55□□□□□ -0.08
SCAF1-202ENST00000595242 GPT2Q8TD30 523 aa14.55□□□□□ -0.08
SCAF1-202ENST00000595242 ESR2Q92731 530 aa14.55□□□□□ -0.08
SCAF1-202ENST00000595242 CASP10Q92851 521 aa14.55□□□□□ -0.08
SCAF1-202ENST00000595242 RTP3Q9BQQ7 232 aa14.55□□□□□ -0.08
SCAF1-202ENST00000595242 KRT23Q9C075 422 aa14.55□□□□□ -0.08
SCAF1-202ENST00000595242 FAM49AQ9H0Q0 323 aaPredicted RBP14.55□□□□□ -0.08
SCAF1-202ENST00000595242 KAT14Q9H8E8 782 aa14.55□□□□□ -0.08
SCAF1-202ENST00000595242 ENTPD7Q9NQZ7 604 aa14.55□□□□□ -0.08
SCAF1-202ENST00000595242 RTEL1Q9NZ71 1219 aa14.55□□□□□ -0.08
SCAF1-202ENST00000595242 LZTS1Q9Y250 596 aa14.55□□□□□ -0.08
SCAF1-202ENST00000595242 JAK2O60674 1132 aa14.54□□□□□ -0.08
SCAF1-202ENST00000595242 PPP1R11O60927 126 aaPredicted RBP14.54□□□□□ -0.08
SCAF1-202ENST00000595242 STAM2O75886 525 aa14.54□□□□□ -0.08
SCAF1-202ENST00000595242 TCF7P36402 384 aaPredicted RBP14.54□□□□□ -0.08
SCAF1-202ENST00000595242 MTHFRP42898 656 aa14.54□□□□□ -0.08
SCAF1-202ENST00000595242 SARSP49591 514 aaKnown RBP14.54□□□□□ -0.08
SCAF1-202ENST00000595242 TMEM62Q0P6H9 643 aa14.54□□□□□ -0.08
SCAF1-202ENST00000595242 FAM102BQ5T8I3 360 aa14.54□□□□□ -0.08
SCAF1-202ENST00000595242 CYB5R4Q7L1T6 521 aa14.54□□□□□ -0.08
SCAF1-202ENST00000595242 PLCD3Q8N3E9 789 aa14.54□□□□□ -0.08
SCAF1-202ENST00000595242 MRPS27Q92552 414 aaKnown RBP14.54□□□□□ -0.08
SCAF1-202ENST00000595242 ZBTB10Q96DT7 871 aa14.54□□□□□ -0.08
SCAF1-202ENST00000595242 CHAMP1Q96JM3 812 aa14.54□□□□□ -0.08
SCAF1-202ENST00000595242 INPP4AQ96PE3 977 aaPredicted RBP14.54□□□□□ -0.08
SCAF1-202ENST00000595242 TMX1Q9H3N1 280 aa14.54□□□□□ -0.08
SCAF1-202ENST00000595242 RNF41Q9H4P4 317 aaPredicted RBP14.54□□□□□ -0.08
SCAF1-202ENST00000595242 NGRNQ9NPE2 291 aaKnown RBP14.54□□□□□ -0.08
SCAF1-202ENST00000595242 TYW1Q9NV66 732 aaKnown RBP14.54□□□□□ -0.08
SCAF1-202ENST00000595242 HCSTQ9UBK5 93 aa14.54□□□□□ -0.08
SCAF1-202ENST00000595242 PUF60Q9UHX1 559 aaKnown RBP14.54□□□□□ -0.08
SCAF1-202ENST00000595242 BRPF3Q9ULD4 1205 aa14.54□□□□□ -0.08
SCAF1-202ENST00000595242 R4GN57 208 aa14.54□□□□□ -0.08
SCAF1-202ENST00000595242 IGSF9BQ9UPX0 1349 aa14.54□□□□□ -0.08
SCAF1-202ENST00000595242 VPS37CA5D8V6 355 aaPredicted RBP14.53□□□□□ -0.08
SCAF1-202ENST00000595242 GOLGA6L3A6NEY3 463 aa14.53□□□□□ -0.08
SCAF1-202ENST00000595242 GCOM1H8Y6P7 765 aaPredicted RBP14.53□□□□□ -0.08
SCAF1-202ENST00000595242 M0QZ92 97 aa14.53□□□□□ -0.08
SCAF1-202ENST00000595242 FIBPO43427 364 aa14.53□□□□□ -0.08
SCAF1-202ENST00000595242 RPLP2P05387 115 aaKnown RBP14.53□□□□□ -0.08
SCAF1-202ENST00000595242 WEE2P0C1S8 567 aa14.53□□□□□ -0.08
SCAF1-202ENST00000595242 POLR2MP0CAP2 368 aa14.53□□□□□ -0.08
SCAF1-202ENST00000595242 MARK3P27448 753 aa14.53□□□□□ -0.08
SCAF1-202ENST00000595242 LIFRP42702 1097 aa14.53□□□□□ -0.08
SCAF1-202ENST00000595242 RCAN1P53805 252 aa14.53□□□□□ -0.08
SCAF1-202ENST00000595242 IGBP1P78318 339 aa14.53□□□□□ -0.08
SCAF1-202ENST00000595242 PLCB3Q01970 1234 aa14.53□□□□□ -0.08
SCAF1-202ENST00000595242 GZF1Q9H116 711 aaPredicted RBP14.53□□□□□ -0.08
SCAF1-202ENST00000595242 ERAP1Q9NZ08 941 aa14.53□□□□□ -0.08
SCAF1-202ENST00000595242 TRPV2Q9Y5S1 764 aa14.53□□□□□ -0.08
SCAF1-202ENST00000595242 HCFC2Q9Y5Z7 792 aa14.53□□□□□ -0.08
SCAF1-202ENST00000595242 CHD8Q9HCK8 2581 aa14.52□□□□□ -0.08
SCAF1-202ENST00000595242 KLF18A0A0U1RQI7 1052 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms