RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 MKRN4PQ13434 485 aaPredicted RBP25.1■■□□□ 1.61
SNRNP70-204ENST00000595231 MCM6Q14566 821 aa25.1■■□□□ 1.61
SNRNP70-204ENST00000595231 EFCAB12Q6NXP0 572 aa25.1■■□□□ 1.61
SNRNP70-204ENST00000595231 PADI6Q6TGC4 694 aa25.1■■□□□ 1.61
SNRNP70-204ENST00000595231 LARP4BQ92615 738 aaKnown RBP25.1■■□□□ 1.61
SNRNP70-204ENST00000595231 XPNPEP1Q9NQW7 623 aa25.1■■□□□ 1.61
SNRNP70-204ENST00000595231 NOD1Q9Y239 953 aa25.1■■□□□ 1.61
SNRNP70-204ENST00000595231 DGAT1O75907 488 aa25.1■■□□□ 1.61
SNRNP70-204ENST00000595231 POLGP54098 1239 aaPredicted RBP25.1■■□□□ 1.61
SNRNP70-204ENST00000595231 KIAA0319LQ8IZA0 1049 aa25.1■■□□□ 1.61
SNRNP70-204ENST00000595231 LRRC71Q8N4P6 559 aa25.1■■□□□ 1.61
SNRNP70-204ENST00000595231 SLC7A3Q8WY07 619 aa25.1■■□□□ 1.61
SNRNP70-204ENST00000595231 DHX58Q96C10 678 aa25.1■■□□□ 1.61
SNRNP70-204ENST00000595231 CCDC43Q96MW1 224 aaKnown RBP25.1■■□□□ 1.61
SNRNP70-204ENST00000595231 BMP2KQ9NSY1 1161 aaPredicted RBP25.1■■□□□ 1.61
SNRNP70-204ENST00000595231 RGS19P49795 217 aa25.09■■□□□ 1.61
SNRNP70-204ENST00000595231 DRP2Q13474 957 aa25.09■■□□□ 1.61
SNRNP70-204ENST00000595231 TRIM71Q2Q1W2 868 aaKnown RBP25.09■■□□□ 1.61
SNRNP70-204ENST00000595231 RINT1Q6NUQ1 792 aa25.09■■□□□ 1.61
SNRNP70-204ENST00000595231 TAF2Q6P1X5 1199 aa25.09■■□□□ 1.61
SNRNP70-204ENST00000595231 C1orf186Q6ZWK4 172 aa25.09■■□□□ 1.61
SNRNP70-204ENST00000595231 METTL13Q8N6R0 699 aa25.09■■□□□ 1.61
SNRNP70-204ENST00000595231 IQUBQ8NA54 791 aa25.09■■□□□ 1.61
SNRNP70-204ENST00000595231 SUGCTQ9HAC7 445 aa25.09■■□□□ 1.61
SNRNP70-204ENST00000595231 TBX21Q9UL17 535 aa25.09■■□□□ 1.61
SNRNP70-204ENST00000595231 USO1O60763 962 aaKnown RBP25.08■■□□□ 1.61
SNRNP70-204ENST00000595231 CLTBP09497 229 aa25.08■■□□□ 1.61
SNRNP70-204ENST00000595231 CLCN3P51790 818 aa25.08■■□□□ 1.61
SNRNP70-204ENST00000595231 EMC2Q15006 297 aa25.08■■□□□ 1.61
SNRNP70-204ENST00000595231 ARSHQ5FYA8 562 aa25.08■■□□□ 1.61
SNRNP70-204ENST00000595231 SH3RF1Q7Z6J0 888 aa25.08■■□□□ 1.61
SNRNP70-204ENST00000595231 RPAINQ86UA6 219 aa25.08■■□□□ 1.61
SNRNP70-204ENST00000595231 EXOC8Q8IYI6 725 aa25.08■■□□□ 1.61
SNRNP70-204ENST00000595231 RETREG2Q8NC44 543 aa25.08■■□□□ 1.61
SNRNP70-204ENST00000595231 DNAJB3Q8WWF6 145 aa25.08■■□□□ 1.61
SNRNP70-204ENST00000595231 RUSC1Q9BVN2 902 aa25.08■■□□□ 1.61
SNRNP70-204ENST00000595231 SSBP05455 408 aaKnown RBP eCLIP25.07■■□□□ 1.62e-8■□□□□ 9.6
SNRNP70-204ENST00000595231 CYP11B2P19099 503 aa25.07■■□□□ 1.6
SNRNP70-204ENST00000595231 DHX8Q14562 1220 aaKnown RBP25.07■■□□□ 1.6
SNRNP70-204ENST00000595231 ENGASEQ8NFI3 743 aa25.07■■□□□ 1.6
SNRNP70-204ENST00000595231 JPH2Q9BR39 696 aaPredicted RBP25.07■■□□□ 1.6
SNRNP70-204ENST00000595231 ATP6V0A4Q9HBG4 840 aa25.07■■□□□ 1.6
SNRNP70-204ENST00000595231 LMBRD1Q9NUN5 540 aa25.07■■□□□ 1.6
SNRNP70-204ENST00000595231 CAPN15O75808 1086 aa25.07■■□□□ 1.6
SNRNP70-204ENST00000595231 SYKP43405 635 aa25.07■■□□□ 1.6
SNRNP70-204ENST00000595231 UBE2HP62256 183 aa25.07■■□□□ 1.6
SNRNP70-204ENST00000595231 SNW1Q13573 536 aaKnown RBP25.07■■□□□ 1.6
SNRNP70-204ENST00000595231 LONRF3Q496Y0 759 aa25.07■■□□□ 1.6
SNRNP70-204ENST00000595231 MTRQ99707 1265 aa25.07■■□□□ 1.6
SNRNP70-204ENST00000595231 FAM49AQ9H0Q0 323 aaPredicted RBP25.07■■□□□ 1.6
SNRNP70-204ENST00000595231 CUEDC2Q9H467 287 aa25.07■■□□□ 1.6
SNRNP70-204ENST00000595231 TMEM39AQ9NV64 488 aa25.07■■□□□ 1.6
SNRNP70-204ENST00000595231 TRIM43BA6NCK2 446 aa25.06■■□□□ 1.6
SNRNP70-204ENST00000595231 ACTN4O43707 911 aaKnown RBP25.06■■□□□ 1.6
SNRNP70-204ENST00000595231 RBL2Q08999 1139 aa25.06■■□□□ 1.6
SNRNP70-204ENST00000595231 FMR1NBQ8N0W7 255 aaPredicted RBP25.06■■□□□ 1.6
SNRNP70-204ENST00000595231 TMEM143Q96AN5 459 aa25.06■■□□□ 1.6
SNRNP70-204ENST00000595231 TRIM43Q96BQ3 446 aaPredicted RBP25.06■■□□□ 1.6
SNRNP70-204ENST00000595231 PYM1Q9BRP8 204 aaKnown RBP25.06■■□□□ 1.6
SNRNP70-204ENST00000595231 NOC4LQ9BVI4 516 aaKnown RBP25.06■■□□□ 1.6
SNRNP70-204ENST00000595231 KBTBD4Q9NVX7 518 aa25.06■■□□□ 1.6
SNRNP70-204ENST00000595231 SERTAD1Q9UHV2 236 aa25.06■■□□□ 1.6
SNRNP70-204ENST00000595231 GAS2O43903 313 aaKnown RBP25.05■■□□□ 1.6
SNRNP70-204ENST00000595231 EVI5O60447 810 aa25.05■■□□□ 1.6
SNRNP70-204ENST00000595231 ZNF202O95125 648 aa25.05■■□□□ 1.6
SNRNP70-204ENST00000595231 TMOD1P28289 359 aa25.05■■□□□ 1.6
SNRNP70-204ENST00000595231 SV2BQ7L1I2 683 aa25.05■■□□□ 1.6
SNRNP70-204ENST00000595231 KCND2Q9NZV8 630 aa25.05■■□□□ 1.6
SNRNP70-204ENST00000595231 KIAA0355O15063 1070 aa25.04■■□□□ 1.6
SNRNP70-204ENST00000595231 SLFN14P0C7P3 912 aa25.04■■□□□ 1.6
SNRNP70-204ENST00000595231 CKBP12277 381 aa25.04■■□□□ 1.6
SNRNP70-204ENST00000595231 LIG1P18858 919 aa25.04■■□□□ 1.6
SNRNP70-204ENST00000595231 GUCY2CP25092 1073 aa25.04■■□□□ 1.6
SNRNP70-204ENST00000595231 MAEAQ7L5Y9 396 aa25.04■■□□□ 1.6
SNRNP70-204ENST00000595231 GPBP1Q86WP2 473 aa25.04■■□□□ 1.6
SNRNP70-204ENST00000595231 C7orf61Q8IZ16 206 aa25.04■■□□□ 1.6
SNRNP70-204ENST00000595231 NME8Q8N427 588 aa25.04■■□□□ 1.6
SNRNP70-204ENST00000595231 MCPH1Q8NEM0 835 aa25.04■■□□□ 1.6
SNRNP70-204ENST00000595231 CAGE1Q8TC20 777 aa25.04■■□□□ 1.6
SNRNP70-204ENST00000595231 DPF3Q92784 378 aa25.04■■□□□ 1.6
SNRNP70-204ENST00000595231 POLD4Q9HCU8 107 aa25.04■■□□□ 1.6
SNRNP70-204ENST00000595231 GPRC5CQ9NQ84 441 aa25.04■■□□□ 1.6
SNRNP70-204ENST00000595231 UMODL1Q5DID0 1318 aa25.04■■□□□ 1.6
SNRNP70-204ENST00000595231 ITGB8P26012 769 aa25.04■■□□□ 1.6
SNRNP70-204ENST00000595231 ARL2P36404 184 aa25.04■■□□□ 1.6
SNRNP70-204ENST00000595231 THPOP40225 353 aa25.04■■□□□ 1.6
SNRNP70-204ENST00000595231 DNM2P50570 870 aa25.04■■□□□ 1.6
SNRNP70-204ENST00000595231 FAM160A1Q05DH4 1040 aa25.04■■□□□ 1.6
SNRNP70-204ENST00000595231 IER5Q5VY09 327 aa25.04■■□□□ 1.6
SNRNP70-204ENST00000595231 TRAF7Q6Q0C0 670 aa25.04■■□□□ 1.6
SNRNP70-204ENST00000595231 STAMQ92783 540 aa25.04■■□□□ 1.6
SNRNP70-204ENST00000595231 HIPK3Q9H422 1215 aa25.04■■□□□ 1.6
SNRNP70-204ENST00000595231 SUCLA2Q9P2R7 463 aaPredicted RBP25.04■■□□□ 1.6
SNRNP70-204ENST00000595231 TNRC18O15417 2968 aaPredicted RBP25.03■■□□□ 1.6
SNRNP70-204ENST00000595231 NPHP3-ACAD11A0A0J9YXS1 232 aa25.03■■□□□ 1.6
SNRNP70-204ENST00000595231 MYMKA6NI61 221 aa25.03■■□□□ 1.6
SNRNP70-204ENST00000595231 PITPNM1O00562 1244 aa25.03■■□□□ 1.6
SNRNP70-204ENST00000595231 NR1I2O75469 434 aa25.03■■□□□ 1.6
SNRNP70-204ENST00000595231 VTNP04004 478 aa25.03■■□□□ 1.6
SNRNP70-204ENST00000595231 ZNF618Q5T7W0 954 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms