RNA–Protein interactions for RNA: ENST00000595081.5

PNKP-205, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 513 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-205ENST00000595081 SPTLC2O15270 562 aa25.54■■□□□ 1.68
PNKP-205ENST00000595081 YEATS4O95619 227 aa25.54■■□□□ 1.68
PNKP-205ENST00000595081 VTNP04004 478 aa25.54■■□□□ 1.68
PNKP-205ENST00000595081 MUTP22033 750 aa25.54■■□□□ 1.68
PNKP-205ENST00000595081 BMP8BP34820 402 aa25.54■■□□□ 1.68
PNKP-205ENST00000595081 RFC2P35250 354 aa25.54■■□□□ 1.68
PNKP-205ENST00000595081 POLGP54098 1239 aaPredicted RBP25.54■■□□□ 1.68
PNKP-205ENST00000595081 MKRN4PQ13434 485 aaPredicted RBP25.54■■□□□ 1.68
PNKP-205ENST00000595081 CABP7Q86V35 215 aa25.54■■□□□ 1.68
PNKP-205ENST00000595081 PLIN2Q99541 437 aa25.54■■□□□ 1.68
PNKP-205ENST00000595081 DHX33Q9H6R0 707 aaKnown RBP25.54■■□□□ 1.68
PNKP-205ENST00000595081 AKT3Q9Y243 479 aa25.54■■□□□ 1.68
PNKP-205ENST00000595081 MORC2Q9Y6X9 1032 aaPredicted RBP25.54■■□□□ 1.68
PNKP-205ENST00000595081 EVPLQ92817 2033 aa25.54■■□□□ 1.68
PNKP-205ENST00000595081 RPLP2P05387 115 aaKnown RBP25.53■■□□□ 1.68
PNKP-205ENST00000595081 XRCC6P12956 609 aaKnown RBP eCLIP25.53■■□□□ 1.68
PNKP-205ENST00000595081 TMOD1P28289 359 aa25.53■■□□□ 1.68
PNKP-205ENST00000595081 RFC5P40937 340 aa25.53■■□□□ 1.68
PNKP-205ENST00000595081 NUCB2P80303 420 aa25.53■■□□□ 1.68
PNKP-205ENST00000595081 C9orf50Q5SZB4 431 aa25.53■■□□□ 1.68
PNKP-205ENST00000595081 IER5Q5VY09 327 aa25.53■■□□□ 1.68
PNKP-205ENST00000595081 ATL3Q6DD88 541 aa25.53■■□□□ 1.68
PNKP-205ENST00000595081 NME8Q8N427 588 aa25.53■■□□□ 1.68
PNKP-205ENST00000595081 KRI1Q8N9T8 703 aaKnown RBP25.53■■□□□ 1.68
PNKP-205ENST00000595081 SLC7A3Q8WY07 619 aa25.53■■□□□ 1.68
PNKP-205ENST00000595081 PNMA5Q96PV4 448 aa25.53■■□□□ 1.68
PNKP-205ENST00000595081 MAP7D2Q96T17 732 aa25.53■■□□□ 1.68
PNKP-205ENST00000595081 DBR1Q9UK59 544 aaKnown RBP25.53■■□□□ 1.68
PNKP-205ENST00000595081 RBM19Q9Y4C8 960 aaKnown RBP25.53■■□□□ 1.68
PNKP-205ENST00000595081 PPME1Q9Y570 386 aa25.53■■□□□ 1.68
PNKP-205ENST00000595081 TRPV2Q9Y5S1 764 aa25.53■■□□□ 1.68
PNKP-205ENST00000595081 ARID2Q68CP9 1835 aa25.52■■□□□ 1.68
PNKP-205ENST00000595081 UBA7P41226 1012 aa25.52■■□□□ 1.68
PNKP-205ENST00000595081 GRB10Q13322 594 aa25.52■■□□□ 1.68
PNKP-205ENST00000595081 EMC2Q15006 297 aa25.52■■□□□ 1.68
PNKP-205ENST00000595081 USP49Q70CQ1 688 aa25.52■■□□□ 1.68
PNKP-205ENST00000595081 KCNK18Q7Z418 384 aa25.52■■□□□ 1.68
PNKP-205ENST00000595081 RPUSD2Q8IZ73 545 aaKnown RBP25.52■■□□□ 1.68
PNKP-205ENST00000595081 EPSTI1Q96J88 318 aa25.52■■□□□ 1.68
PNKP-205ENST00000595081 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.52■■□□□ 1.68
PNKP-205ENST00000595081 CFAP45Q9UL16 551 aa25.52■■□□□ 1.68
PNKP-205ENST00000595081 GINS2Q9Y248 185 aa25.52■■□□□ 1.68
PNKP-205ENST00000595081 KDM3AQ9Y4C1 1321 aa25.52■■□□□ 1.68
PNKP-205ENST00000595081 E9PMD0 336 aa25.51■■□□□ 1.67
PNKP-205ENST00000595081 M0QZ92 97 aa25.51■■□□□ 1.67
PNKP-205ENST00000595081 PARNO95453 639 aaKnown RBP25.51■■□□□ 1.67
PNKP-205ENST00000595081 NCLP19338 710 aaKnown RBP25.51■■□□□ 1.67
PNKP-205ENST00000595081 SHHQ15465 462 aa25.51■■□□□ 1.67
PNKP-205ENST00000595081 KIZQ2M2Z5 673 aa25.51■■□□□ 1.67
PNKP-205ENST00000595081 TMEM240Q5SV17 173 aa25.51■■□□□ 1.67
PNKP-205ENST00000595081 HYIQ5T013 277 aa25.51■■□□□ 1.67
PNKP-205ENST00000595081 ZNF365Q70YC5 407 aa25.51■■□□□ 1.67
PNKP-205ENST00000595081 TMEM143Q96AN5 459 aa25.51■■□□□ 1.67
PNKP-205ENST00000595081 ZNF668Q96K58 619 aaPredicted RBP25.51■■□□□ 1.67
PNKP-205ENST00000595081 JPH2Q9BR39 696 aaPredicted RBP25.51■■□□□ 1.67
PNKP-205ENST00000595081 CELF4Q9BZC1 486 aaKnown RBP25.51■■□□□ 1.67
PNKP-205ENST00000595081 CDHR5Q9HBB8 845 aa25.51■■□□□ 1.67
PNKP-205ENST00000595081 XPNPEP1Q9NQW7 623 aa25.51■■□□□ 1.67
PNKP-205ENST00000595081 ARHGEF35A5YM69 484 aa25.5■■□□□ 1.67
PNKP-205ENST00000595081 USO1O60763 962 aaKnown RBP25.5■■□□□ 1.67
PNKP-205ENST00000595081 PPP6R2O75170 966 aa25.5■■□□□ 1.67
PNKP-205ENST00000595081 CXCL10P02778 98 aa25.5■■□□□ 1.67
PNKP-205ENST00000595081 GHRP10912 638 aa25.5■■□□□ 1.67
PNKP-205ENST00000595081 KARSQ15046 597 aaKnown RBP25.5■■□□□ 1.67
PNKP-205ENST00000595081 TCTN1Q2MV58 587 aa25.5■■□□□ 1.67
PNKP-205ENST00000595081 PSRC1Q6PGN9 363 aaPredicted RBP25.5■■□□□ 1.67
PNKP-205ENST00000595081 TET1Q8NFU7 2136 aa25.5■■□□□ 1.67
PNKP-205ENST00000595081 SYMPKQ92797 1274 aaKnown RBP25.5■■□□□ 1.67
PNKP-205ENST00000595081 CDK5RAP3Q96JB5 506 aa25.5■■□□□ 1.67
PNKP-205ENST00000595081 BHMT2Q9H2M3 363 aa25.5■■□□□ 1.67
PNKP-205ENST00000595081 SUCLA2Q9P2R7 463 aaPredicted RBP25.5■■□□□ 1.67
PNKP-205ENST00000595081 DNM3Q9UQ16 869 aa25.5■■□□□ 1.67
PNKP-205ENST00000595081 ATP6V1DQ9Y5K8 247 aa25.5■■□□□ 1.67
PNKP-205ENST00000595081 SIP14410 1827 aa25.49■■□□□ 1.67
PNKP-205ENST00000595081 GPR32O75388 356 aa25.49■■□□□ 1.67
PNKP-205ENST00000595081 DGAT1O75907 488 aa25.49■■□□□ 1.67
PNKP-205ENST00000595081 DNM2P50570 870 aa25.49■■□□□ 1.67
PNKP-205ENST00000595081 NLRP11P59045 1033 aaKnown RBP25.49■■□□□ 1.67
PNKP-205ENST00000595081 LPIN1Q14693 890 aa25.49■■□□□ 1.67
PNKP-205ENST00000595081 TMEM119Q4V9L6 283 aa25.49■■□□□ 1.67
PNKP-205ENST00000595081 OTOP2Q7RTS6 562 aa25.49■■□□□ 1.67
PNKP-205ENST00000595081 EXOC8Q8IYI6 725 aa25.49■■□□□ 1.67
PNKP-205ENST00000595081 KCNG4Q8TDN1 519 aa25.49■■□□□ 1.67
PNKP-205ENST00000595081 MTRQ99707 1265 aa25.49■■□□□ 1.67
PNKP-205ENST00000595081 ATP6V0A4Q9HBG4 840 aa25.49■■□□□ 1.67
PNKP-205ENST00000595081 FGBP02675 491 aa25.48■■□□□ 1.67
PNKP-205ENST00000595081 PFKMP08237 780 aa25.48■■□□□ 1.67
PNKP-205ENST00000595081 KRT85P78386 507 aa25.48■■□□□ 1.67
PNKP-205ENST00000595081 FBXO47Q5MNV8 452 aa25.48■■□□□ 1.67
PNKP-205ENST00000595081 PADI6Q6TGC4 694 aa25.48■■□□□ 1.67
PNKP-205ENST00000595081 TDHQ8IZJ6 230 aa25.48■■□□□ 1.67
PNKP-205ENST00000595081 RASSF8Q8NHQ8 419 aa25.48■■□□□ 1.67
PNKP-205ENST00000595081 LRRC15Q8TF66 581 aa25.48■■□□□ 1.67
PNKP-205ENST00000595081 CALML4Q96GE6 196 aa25.48■■□□□ 1.67
PNKP-205ENST00000595081 OSMRQ99650 979 aa25.48■■□□□ 1.67
PNKP-205ENST00000595081 CCSER1Q9C0I3 900 aa25.48■■□□□ 1.67
PNKP-205ENST00000595081 NT5C3AQ9H0P0 336 aa25.48■■□□□ 1.67
PNKP-205ENST00000595081 ADAMTS10Q9H324 1103 aa25.48■■□□□ 1.67
PNKP-205ENST00000595081 RCOR1Q9UKL0 485 aa25.48■■□□□ 1.67
PNKP-205ENST00000595081 SLC26A4O43511 780 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms