RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 POTEGQ6S5H5 508 aa14.4□□□□□ -0.1
VRK3-209ENST00000594948 POTEEQ6S8J3 1075 aa14.4□□□□□ -0.1
VRK3-209ENST00000594948 CNBD1Q8NA66 436 aa14.4□□□□□ -0.1
VRK3-209ENST00000594948 OR2W6PQ8NHA6 318 aa14.4□□□□□ -0.1
VRK3-209ENST00000594948 OLIG1Q8TAK6 271 aa14.4□□□□□ -0.1
VRK3-209ENST00000594948 DCAF4Q8WV16 495 aa14.4□□□□□ -0.1
VRK3-209ENST00000594948 GJA10Q969M2 543 aa14.4□□□□□ -0.1
VRK3-209ENST00000594948 BORCS6Q96GS4 357 aa14.4□□□□□ -0.1
VRK3-209ENST00000594948 CCDC17Q96LX7 622 aa14.4□□□□□ -0.1
VRK3-209ENST00000594948 GPR101Q96P66 508 aaPredicted RBP14.4□□□□□ -0.1
VRK3-209ENST00000594948 REEP2Q9BRK0 252 aa14.4□□□□□ -0.1
VRK3-209ENST00000594948 CENPHQ9H3R5 247 aa14.4□□□□□ -0.1
VRK3-209ENST00000594948 GCNT4Q9P109 453 aa14.4□□□□□ -0.1
VRK3-209ENST00000594948 NOVA2Q9UNW9 492 aaKnown RBP14.4□□□□□ -0.1
VRK3-209ENST00000594948 SIPA1L1O43166 1804 aa14.4□□□□□ -0.1
VRK3-209ENST00000594948 RBBP6Q7Z6E9 1792 aaKnown RBP14.4□□□□□ -0.1
VRK3-209ENST00000594948 GOLGA6L10A0A0M3HER8 536 aa14.39□□□□□ -0.11
VRK3-209ENST00000594948 DDX3YO15523 660 aaKnown RBP14.39□□□□□ -0.11
VRK3-209ENST00000594948 TTI1O43156 1089 aa14.39□□□□□ -0.11
VRK3-209ENST00000594948 SPATA31C1P0DKV0 1188 aa14.39□□□□□ -0.11
VRK3-209ENST00000594948 ITGA4P13612 1032 aa14.39□□□□□ -0.11
VRK3-209ENST00000594948 HSPA6P17066 643 aa14.39□□□□□ -0.11
VRK3-209ENST00000594948 SHMT1P34896 483 aa14.39□□□□□ -0.11
VRK3-209ENST00000594948 SOX5P35711 763 aa14.39□□□□□ -0.11
VRK3-209ENST00000594948 HADHBP55084 474 aaKnown RBP14.39□□□□□ -0.11
VRK3-209ENST00000594948 DHX9Q08211 1270 aaKnown RBP14.39□□□□□ -0.11
VRK3-209ENST00000594948 ODF2Q5BJF6 829 aa14.39□□□□□ -0.11
VRK3-209ENST00000594948 ANKRD20A8PQ5CZ79 823 aa14.39□□□□□ -0.11
VRK3-209ENST00000594948 DCAF17Q5H9S7 520 aaPredicted RBP14.39□□□□□ -0.11
VRK3-209ENST00000594948 GKAP1Q5VSY0 366 aaPredicted RBP14.39□□□□□ -0.11
VRK3-209ENST00000594948 SMIM5Q71RC9 77 aa14.39□□□□□ -0.11
VRK3-209ENST00000594948 LNX1Q8TBB1 728 aaPredicted RBP14.39□□□□□ -0.11
VRK3-209ENST00000594948 ATP8B4Q8TF62 1192 aa14.39□□□□□ -0.11
VRK3-209ENST00000594948 U2AF1L4Q8WU68 220 aaKnown RBP14.39□□□□□ -0.11
VRK3-209ENST00000594948 RPGRQ92834 1020 aaKnown RBP14.39□□□□□ -0.11
VRK3-209ENST00000594948 FMO2Q99518 471 aa14.39□□□□□ -0.11
VRK3-209ENST00000594948 SYT11Q9BT88 431 aa14.39□□□□□ -0.11
VRK3-209ENST00000594948 POLR3CQ9BUI4 534 aaPredicted RBP14.39□□□□□ -0.11
VRK3-209ENST00000594948 STK33Q9BYT3 514 aa14.39□□□□□ -0.11
VRK3-209ENST00000594948 KDM4CQ9H3R0 1056 aa14.39□□□□□ -0.11
VRK3-209ENST00000594948 GOLPH3Q9H4A6 298 aa14.39□□□□□ -0.11
VRK3-209ENST00000594948 ZHX3Q9H4I2 956 aa14.39□□□□□ -0.11
VRK3-209ENST00000594948 SLC40A1Q9NP59 571 aa14.39□□□□□ -0.11
VRK3-209ENST00000594948 CNOT8Q9UFF9 292 aaKnown RBP14.39□□□□□ -0.11
VRK3-209ENST00000594948 PPP1R12BO60237 982 aaPredicted RBP14.38□□□□□ -0.11
VRK3-209ENST00000594948 EYA4O95677 639 aa14.38□□□□□ -0.11
VRK3-209ENST00000594948 FOSP01100 380 aaPredicted RBP14.38□□□□□ -0.11
VRK3-209ENST00000594948 FLT3P36888 993 aa14.38□□□□□ -0.11
VRK3-209ENST00000594948 KCNQ4P56696 695 aa14.38□□□□□ -0.11
VRK3-209ENST00000594948 PDE4CQ08493 712 aa14.38□□□□□ -0.11
VRK3-209ENST00000594948 IFFO1Q0D2I5 559 aa14.38□□□□□ -0.11
VRK3-209ENST00000594948 BYSLQ13895 437 aaKnown RBP14.38□□□□□ -0.11
VRK3-209ENST00000594948 TCEAL1Q15170 157 aa14.38□□□□□ -0.11
VRK3-209ENST00000594948 QRICH1Q2TAL8 776 aa14.38□□□□□ -0.11
VRK3-209ENST00000594948 KRT71Q3SY84 523 aa14.38□□□□□ -0.11
VRK3-209ENST00000594948 DUPD1Q68J44 220 aa14.38□□□□□ -0.11
VRK3-209ENST00000594948 MKL1Q969V6 931 aa14.38□□□□□ -0.11
VRK3-209ENST00000594948 PGM2Q96G03 612 aa14.38□□□□□ -0.11
VRK3-209ENST00000594948 CCDC114Q96M63 670 aa14.38□□□□□ -0.11
VRK3-209ENST00000594948 OSBPL7Q9BZF2 842 aa14.38□□□□□ -0.11
VRK3-209ENST00000594948 POLD4Q9HCU8 107 aa14.38□□□□□ -0.11
VRK3-209ENST00000594948 AJAP1Q9UKB5 411 aaPredicted RBP14.38□□□□□ -0.11
VRK3-209ENST00000594948 MYH11P35749 1972 aa14.38□□□□□ -0.11
VRK3-209ENST00000594948 TBCAO75347 108 aaKnown RBP14.38□□□□□ -0.11
VRK3-209ENST00000594948 DNAJC8O75937 253 aaPredicted RBP14.38□□□□□ -0.11
VRK3-209ENST00000594948 DRD4P21917 467 aa14.38□□□□□ -0.11
VRK3-209ENST00000594948 RFX1P22670 979 aa14.38□□□□□ -0.11
VRK3-209ENST00000594948 CIITAP33076 1130 aa14.38□□□□□ -0.11
VRK3-209ENST00000594948 RFC4P35249 363 aa14.38□□□□□ -0.11
VRK3-209ENST00000594948 STAT3P40763 770 aa14.38□□□□□ -0.11
VRK3-209ENST00000594948 MMP14P50281 582 aa14.38□□□□□ -0.11
VRK3-209ENST00000594948 EIF6P56537 245 aaKnown RBP14.38□□□□□ -0.11
VRK3-209ENST00000594948 MAGOHP61326 146 aaKnown RBP14.38□□□□□ -0.11
VRK3-209ENST00000594948 ARHGAP4P98171 946 aa14.38□□□□□ -0.11
VRK3-209ENST00000594948 PLS1Q14651 629 aa14.38□□□□□ -0.11
VRK3-209ENST00000594948 ERMARDQ5T6L9 678 aa14.38□□□□□ -0.11
VRK3-209ENST00000594948 TEX2Q8IWB9 1127 aa14.38□□□□□ -0.11
VRK3-209ENST00000594948 MAGOHBQ96A72 148 aaKnown RBP14.38□□□□□ -0.11
VRK3-209ENST00000594948 VTI1AQ96AJ9 217 aa14.38□□□□□ -0.11
VRK3-209ENST00000594948 FAM129AQ9BZQ8 928 aa14.38□□□□□ -0.11
VRK3-209ENST00000594948 ZDHHC18Q9NUE0 388 aa14.38□□□□□ -0.11
VRK3-209ENST00000594948 BCCIPQ9P287 314 aaKnown RBP eCLIP14.38□□□□□ -0.11
VRK3-209ENST00000594948 FRMPD4Q14CM0 1322 aa14.37□□□□□ -0.11
VRK3-209ENST00000594948 USP17L15C9J2P7 530 aa14.37□□□□□ -0.11
VRK3-209ENST00000594948 USP17L13C9JLJ4 530 aa14.37□□□□□ -0.11
VRK3-209ENST00000594948 USP17L11C9JVI0 530 aa14.37□□□□□ -0.11
VRK3-209ENST00000594948 USP17L18D6R9N7 530 aa14.37□□□□□ -0.11
VRK3-209ENST00000594948 USP17L22D6RA61 530 aa14.37□□□□□ -0.11
VRK3-209ENST00000594948 USP17L17D6RBQ6 530 aa14.37□□□□□ -0.11
VRK3-209ENST00000594948 USP17L19D6RCP7 530 aa14.37□□□□□ -0.11
VRK3-209ENST00000594948 USP17L20D6RJB6 530 aa14.37□□□□□ -0.11
VRK3-209ENST00000594948 MEIS2O14770 477 aa14.37□□□□□ -0.11
VRK3-209ENST00000594948 EVI5O60447 810 aa14.37□□□□□ -0.11
VRK3-209ENST00000594948 BUB1BO60566 1050 aaPredicted RBP14.37□□□□□ -0.11
VRK3-209ENST00000594948 BBOX1O75936 387 aa14.37□□□□□ -0.11
VRK3-209ENST00000594948 FGGP02679 453 aa14.37□□□□□ -0.11
VRK3-209ENST00000594948 TMOD1P28289 359 aa14.37□□□□□ -0.11
VRK3-209ENST00000594948 RDXP35241 583 aaKnown RBP14.37□□□□□ -0.11
VRK3-209ENST00000594948 PSMC2P35998 433 aaKnown RBP14.37□□□□□ -0.11
VRK3-209ENST00000594948 SLC16A2P36021 539 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms