RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 LRFN2Q9ULH4 789 aa26.45■■□□□ 1.82
LSM4-204ENST00000594828 AKT3Q9Y243 479 aa26.45■■□□□ 1.82
LSM4-204ENST00000594828 C5orf67F2Z3F1 127 aa26.44■■□□□ 1.82
LSM4-204ENST00000594828 LINC00271P0C7V0 271 aa26.44■■□□□ 1.82
LSM4-204ENST00000594828 LRRC71Q8N4P6 559 aa26.44■■□□□ 1.82
LSM4-204ENST00000594828 OXER1Q8TDS5 423 aa26.44■■□□□ 1.82
LSM4-204ENST00000594828 DENND3A2RUS2 1198 aa26.43■■□□□ 1.82
LSM4-204ENST00000594828 SLC37A4O43826 429 aa26.43■■□□□ 1.82
LSM4-204ENST00000594828 MGEA5O60502 916 aa26.43■■□□□ 1.82
LSM4-204ENST00000594828 SEC24BO95487 1268 aa26.43■■□□□ 1.82
LSM4-204ENST00000594828 FDPSP14324 419 aaKnown RBP26.43■■□□□ 1.82
LSM4-204ENST00000594828 SARSP49591 514 aaKnown RBP26.43■■□□□ 1.82
LSM4-204ENST00000594828 NLRP11P59045 1033 aaKnown RBP26.43■■□□□ 1.82
LSM4-204ENST00000594828 PPP4R3AQ6IN85 833 aa26.43■■□□□ 1.82
LSM4-204ENST00000594828 PIK3AP1Q6ZUJ8 805 aa26.43■■□□□ 1.82
LSM4-204ENST00000594828 CMTR2Q8IYT2 770 aaKnown RBP26.43■■□□□ 1.82
LSM4-204ENST00000594828 ZNF710Q8N1W2 664 aa26.43■■□□□ 1.82
LSM4-204ENST00000594828 LINC01465Q8N7H1 131 aa26.43■■□□□ 1.82
LSM4-204ENST00000594828 GTF3C6Q969F1 213 aa26.43■■□□□ 1.82
LSM4-204ENST00000594828 ADAM2Q99965 735 aa26.43■■□□□ 1.82
LSM4-204ENST00000594828 C11orf84Q9BUA3 381 aaPredicted RBP26.43■■□□□ 1.82
LSM4-204ENST00000594828 RGS18Q9NS28 235 aa26.43■■□□□ 1.82
LSM4-204ENST00000594828 PCDHB7Q9Y5E2 793 aa26.43■■□□□ 1.82
LSM4-204ENST00000594828 NLRC5Q86WI3 1866 aa26.42■■□□□ 1.82
LSM4-204ENST00000594828 WDR81Q562E7 1941 aa26.42■■□□□ 1.82
LSM4-204ENST00000594828 LARGE1O95461 756 aa26.42■■□□□ 1.82
LSM4-204ENST00000594828 GCFC2P16383 781 aaKnown RBP26.42■■□□□ 1.82
LSM4-204ENST00000594828 IBSPP21815 317 aaPredicted RBP26.42■■□□□ 1.82
LSM4-204ENST00000594828 TBC1D8BQ0IIM8 1120 aa26.42■■□□□ 1.82
LSM4-204ENST00000594828 TIGD5Q53EQ6 642 aa26.42■■□□□ 1.82
LSM4-204ENST00000594828 XKR3Q5GH77 459 aa26.42■■□□□ 1.82
LSM4-204ENST00000594828 FAM228AQ86W67 206 aa26.42■■□□□ 1.82
LSM4-204ENST00000594828 BANK1Q8NDB2 785 aa26.42■■□□□ 1.82
LSM4-204ENST00000594828 FAM20AQ96MK3 541 aa26.42■■□□□ 1.82
LSM4-204ENST00000594828 NIFKQ9BYG3 293 aaKnown RBP26.42■■□□□ 1.82
LSM4-204ENST00000594828 C1orf112Q9NSG2 853 aa26.42■■□□□ 1.82
LSM4-204ENST00000594828 RNF216Q9NWF9 866 aaPredicted RBP26.42■■□□□ 1.82
LSM4-204ENST00000594828 SEPT9Q9UHD8 586 aaPredicted RBP26.42■■□□□ 1.82
LSM4-204ENST00000594828 RALGAPA2Q2PPJ7 1873 aa26.42■■□□□ 1.82
LSM4-204ENST00000594828 CCNT1O60563 726 aaKnown RBP26.41■■□□□ 1.82
LSM4-204ENST00000594828 TARBP2Q15633 366 aaKnown RBP26.41■■□□□ 1.82
LSM4-204ENST00000594828 PAN2Q504Q3 1202 aaKnown RBP26.41■■□□□ 1.82
LSM4-204ENST00000594828 SLC24A5Q71RS6 500 aa26.41■■□□□ 1.82
LSM4-204ENST00000594828 NAP1L4Q99733 375 aaKnown RBP26.41■■□□□ 1.82
LSM4-204ENST00000594828 PLVAPQ9BX97 442 aa26.41■■□□□ 1.82
LSM4-204ENST00000594828 ADAMTS10Q9H324 1103 aa26.41■■□□□ 1.82
LSM4-204ENST00000594828 KCNMB3Q9NPA1 279 aa26.41■■□□□ 1.82
LSM4-204ENST00000594828 MRPL42Q9Y6G3 142 aaKnown RBP26.41■■□□□ 1.82
LSM4-204ENST00000594828 SPTBN5Q9NRC6 3674 aaKnown RBP26.4■■□□□ 1.82
LSM4-204ENST00000594828 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP26.4■■□□□ 1.82
LSM4-204ENST00000594828 MTERF2Q49AM1 385 aa26.4■■□□□ 1.82
LSM4-204ENST00000594828 UBE2ZQ9H832 354 aaPredicted RBP26.4■■□□□ 1.82
LSM4-204ENST00000594828 BRMS1Q9HCU9 246 aa26.4■■□□□ 1.82
LSM4-204ENST00000594828 STBD1O95210 358 aa26.39■■□□□ 1.82
LSM4-204ENST00000594828 KRT2P35908 639 aa26.39■■□□□ 1.82
LSM4-204ENST00000594828 PPP2R5CQ13362 524 aa26.39■■□□□ 1.82
LSM4-204ENST00000594828 NSUN7Q8NE18 718 aaKnown RBP26.39■■□□□ 1.82
LSM4-204ENST00000594828 LMAN2LQ9H0V9 348 aa26.39■■□□□ 1.82
LSM4-204ENST00000594828 TCF20Q9UGU0 1960 aaKnown RBP26.38■■□□□ 1.81
LSM4-204ENST00000594828 DDX11L8A8MPP1 907 aa26.38■■□□□ 1.81
LSM4-204ENST00000594828 C9IYK1 514 aa26.38■■□□□ 1.81
LSM4-204ENST00000594828 EML1O00423 815 aa26.38■■□□□ 1.81
LSM4-204ENST00000594828 TBX3O15119 743 aa26.38■■□□□ 1.81
LSM4-204ENST00000594828 GRM6O15303 877 aa26.38■■□□□ 1.81
LSM4-204ENST00000594828 MARCH6O60337 910 aa26.38■■□□□ 1.81
LSM4-204ENST00000594828 EIF4BP23588 611 aaKnown RBP26.38■■□□□ 1.81
LSM4-204ENST00000594828 GATMP50440 423 aa26.38■■□□□ 1.81
LSM4-204ENST00000594828 PSMC5P62195 406 aa26.38■■□□□ 1.81
LSM4-204ENST00000594828 NR5A1Q13285 461 aa26.38■■□□□ 1.81
LSM4-204ENST00000594828 EARS2Q5JPH6 523 aaKnown RBP26.38■■□□□ 1.81
LSM4-204ENST00000594828 ZNF668Q96K58 619 aaPredicted RBP26.38■■□□□ 1.81
LSM4-204ENST00000594828 NECAB3Q96P71 396 aaPredicted RBP26.38■■□□□ 1.81
LSM4-204ENST00000594828 NSUN3Q9H649 340 aaKnown RBP26.38■■□□□ 1.81
LSM4-204ENST00000594828 VAV3Q9UKW4 847 aa26.38■■□□□ 1.81
LSM4-204ENST00000594828 TMEM150BA6NC51 233 aa26.37■■□□□ 1.81
LSM4-204ENST00000594828 GPC3P51654 580 aa26.37■■□□□ 1.81
LSM4-204ENST00000594828 FAM189BP81408 668 aa26.37■■□□□ 1.81
LSM4-204ENST00000594828 DSC3Q14574 896 aa26.37■■□□□ 1.81
LSM4-204ENST00000594828 TCEAL5Q5H9L2 206 aa26.37■■□□□ 1.81
LSM4-204ENST00000594828 P2RX5Q93086 422 aa26.37■■□□□ 1.81
LSM4-204ENST00000594828 SCLT1Q96NL6 688 aa26.37■■□□□ 1.81
LSM4-204ENST00000594828 SH2D3AQ9BRG2 576 aa26.37■■□□□ 1.81
LSM4-204ENST00000594828 XIRP2A4UGR9 3374 aa26.37■■□□□ 1.81
LSM4-204ENST00000594828 KCNA5P22460 613 aa26.36■■□□□ 1.81
LSM4-204ENST00000594828 DNM2P50570 870 aa26.36■■□□□ 1.81
LSM4-204ENST00000594828 CDC42EP1Q00587 391 aa26.36■■□□□ 1.81
LSM4-204ENST00000594828 NAALADL2Q58DX5 795 aa26.36■■□□□ 1.81
LSM4-204ENST00000594828 HAS1Q92839 578 aa26.36■■□□□ 1.81
LSM4-204ENST00000594828 CEP89Q96ST8 783 aa26.36■■□□□ 1.81
LSM4-204ENST00000594828 ALG13Q9NP73 1137 aaKnown RBP26.36■■□□□ 1.81
LSM4-204ENST00000594828 PLAGL2Q9UPG8 496 aa26.36■■□□□ 1.81
LSM4-204ENST00000594828 FAM205CA6NFA0 338 aa26.35■■□□□ 1.81
LSM4-204ENST00000594828 JAK2O60674 1132 aa26.35■■□□□ 1.81
LSM4-204ENST00000594828 DKC1O60832 514 aaKnown RBP eCLIP26.35■■□□□ 1.81
LSM4-204ENST00000594828 DARSP14868 501 aaKnown RBP26.35■■□□□ 1.81
LSM4-204ENST00000594828 ZSCAN20P17040 1043 aaPredicted RBP26.35■■□□□ 1.81
LSM4-204ENST00000594828 QARSP47897 775 aaKnown RBP26.35■■□□□ 1.81
LSM4-204ENST00000594828 DRP2Q13474 957 aa26.35■■□□□ 1.81
LSM4-204ENST00000594828 FAM102BQ5T8I3 360 aa26.35■■□□□ 1.81
LSM4-204ENST00000594828 ANO5Q75V66 913 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms