RNA–Protein interactions for RNA: ENST00000594814.5

LRIT3-202, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRIT3, Length 3,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-202ENST00000594814 IFT43Q96FT9 208 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 HAPLN3Q96S86 360 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 CGREF1Q99674 301 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 TUBB6Q9BUF5 446 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 TIMMDC1Q9NPL8 285 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 ECHDC1Q9NTX5 307 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 DNAAF2Q9NVR5 837 aaKnown RBP4.75□□□□□ -1.65
LRIT3-202ENST00000594814 LIMA1Q9UHB6 759 aaKnown RBP4.75□□□□□ -1.65
LRIT3-202ENST00000594814 PCDHA7Q9UN72 937 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 NIP7Q9Y221 180 aaKnown RBP eCLIP4.75□□□□□ -1.65
LRIT3-202ENST00000594814 LRCH1Q9Y2L9 728 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 TAF6LQ9Y6J9 622 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 A0A1W2PQJ5 194 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 EME2A4GXA9 379 aaPredicted RBP4.75□□□□□ -1.65
LRIT3-202ENST00000594814 GCOM1H8Y6P7 765 aaPredicted RBP4.75□□□□□ -1.65
LRIT3-202ENST00000594814 SART1O43290 800 aaKnown RBP4.75□□□□□ -1.65
LRIT3-202ENST00000594814 CYTH3O43739 400 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 ATP9BO43861 1147 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 CLASP2O75122 1294 aaKnown RBP4.75□□□□□ -1.65
LRIT3-202ENST00000594814 RPS6KA4O75676 772 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 MYZAPP0CAP1 466 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 PYGBP11216 843 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 PIM1P11309 404 aaPredicted RBP4.75□□□□□ -1.65
LRIT3-202ENST00000594814 RPS2P15880 293 aaKnown RBP4.75□□□□□ -1.65
LRIT3-202ENST00000594814 LIFRP42702 1097 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 PAFAH1B1P43034 410 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 SARSP49591 514 aaKnown RBP4.75□□□□□ -1.65
LRIT3-202ENST00000594814 UBXN2AP68543 259 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 TOB2Q14106 344 aaPredicted RBP4.75□□□□□ -1.65
LRIT3-202ENST00000594814 RESP18Q5W5W9 173 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 RASEFQ8IZ41 740 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 NDUFAF2Q8N183 169 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 AGGF1Q8N302 714 aaeCLIP4.75□□□□□ -1.65
LRIT3-202ENST00000594814 ZBTB38Q8NAP3 1195 aaPredicted RBP4.75□□□□□ -1.65
LRIT3-202ENST00000594814 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.75□□□□□ -1.65
LRIT3-202ENST00000594814 SPATA20Q8TB22 786 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 ZFPM2Q8WW38 1151 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 STON2Q8WXE9 905 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 INPP5DQ92835 1189 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 KIFAP3Q92845 792 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 PTPRN2Q92932 1015 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 RBM18Q96H35 190 aaKnown RBP4.75□□□□□ -1.65
LRIT3-202ENST00000594814 DHRS1Q96LJ7 313 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 CATSPER2Q96P56 530 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 GPR101Q96P66 508 aaPredicted RBP4.75□□□□□ -1.65
LRIT3-202ENST00000594814 PPP1R12CQ9BZL4 782 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 ABCG4Q9H172 646 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 MRPL44Q9H9J2 332 aaKnown RBP4.75□□□□□ -1.65
LRIT3-202ENST00000594814 HERC5Q9UII4 1024 aaKnown RBP4.75□□□□□ -1.65
LRIT3-202ENST00000594814 DBNLQ9UJU6 430 aaKnown RBP4.75□□□□□ -1.65
LRIT3-202ENST00000594814 RBM8AQ9Y5S9 174 aaKnown RBP4.75□□□□□ -1.65
LRIT3-202ENST00000594814 PNPLA7Q6ZV29 1317 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 MAGEA13PA6NCF6 341 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 TSPAN6O43657 245 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 RHOXF2BP0C7M4 288 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 NQO1P15559 274 aaKnown RBP4.75□□□□□ -1.65
LRIT3-202ENST00000594814 SERPINB3P29508 390 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 RASSF2P50749 326 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 NEK2P51955 445 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 MCL1Q07820 350 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 MAP2K5Q13163 448 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 TRIM28Q13263 835 aaKnown RBP4.75□□□□□ -1.65
LRIT3-202ENST00000594814 MYBPC3Q14896 1274 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 ENOX2Q16206 610 aaKnown RBP4.75□□□□□ -1.65
LRIT3-202ENST00000594814 CDKAL1Q5VV42 579 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 CFAP161Q6P656 301 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 C3orf62Q6ZUJ4 267 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 KRT26Q7Z3Y9 468 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 PIGWQ7Z7B1 504 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 TXNRD3Q86VQ6 643 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 FAM186BQ8IYM0 893 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 VGLL2Q8N8G2 317 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 PXYLP1Q8TE99 480 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 CELF1Q92879 486 aaKnown RBP4.75□□□□□ -1.65
LRIT3-202ENST00000594814 RHOXF2Q9BQY4 288 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 TMEM109Q9BVC6 243 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 EIF2AQ9BY44 585 aaKnown RBP4.75□□□□□ -1.65
LRIT3-202ENST00000594814 OSBPL2Q9H1P3 480 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 DNAJB4Q9UDY4 337 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 SLC12A6Q9UHW9 1150 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 TAGLN3Q9UI15 199 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 TRMT112Q9UI30 125 aaKnown RBP4.75□□□□□ -1.65
LRIT3-202ENST00000594814 MSRB2Q9Y3D2 182 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 HYOU1Q9Y4L1 999 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 CNTNAP4Q9C0A0 1308 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 BCORQ6W2J9 1755 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 SMIM31A0A1B0GVY4 71 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 PALM3A6NDB9 673 aaPredicted RBP4.74□□□□□ -1.65
LRIT3-202ENST00000594814 BHMG1C9JSJ3 638 aaPredicted RBP4.74□□□□□ -1.65
LRIT3-202ENST00000594814 IRS4O14654 1257 aaPredicted RBP4.74□□□□□ -1.65
LRIT3-202ENST00000594814 SGTAO43765 313 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 PIP5K1CO60331 668 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 LARGE1O95461 756 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 SKIP12755 728 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 ZNF24P17028 368 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 SYKP43405 635 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 PPP2R2AP63151 447 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 OCRLQ01968 901 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 MYO1EQ12965 1108 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 ACVR2BQ13705 512 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms