RNA–Protein interactions for RNA: ENST00000594399.1

USE1-204, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-204ENST00000594399 SLC7A3Q8WY07 619 aa12.05□□□□□ -0.48
USE1-204ENST00000594399 DDX12PQ92771 950 aa12.05□□□□□ -0.48
USE1-204ENST00000594399 C7orf25Q9BPX7 421 aa12.05□□□□□ -0.48
USE1-204ENST00000594399 JPH2Q9BR39 696 aaPredicted RBP12.05□□□□□ -0.48
USE1-204ENST00000594399 TIPINQ9BVW5 301 aa12.05□□□□□ -0.48
USE1-204ENST00000594399 TRIM9Q9C026 710 aa12.05□□□□□ -0.48
USE1-204ENST00000594399 ATP6V0A4Q9HBG4 840 aa12.05□□□□□ -0.48
USE1-204ENST00000594399 STARD7Q9NQZ5 370 aa12.05□□□□□ -0.48
USE1-204ENST00000594399 BMP2KQ9NSY1 1161 aaPredicted RBP12.05□□□□□ -0.48
USE1-204ENST00000594399 MKI67P46013 3256 aaKnown RBP12.05□□□□□ -0.48
USE1-204ENST00000594399 A0A0U1RQG5 324 aaPredicted RBP12.04□□□□□ -0.48
USE1-204ENST00000594399 C17orf102A2RUQ5 167 aa12.04□□□□□ -0.48
USE1-204ENST00000594399 MYMKA6NI61 221 aa12.04□□□□□ -0.48
USE1-204ENST00000594399 GAS2O43903 313 aaKnown RBP12.04□□□□□ -0.48
USE1-204ENST00000594399 TBCAO75347 108 aaKnown RBP12.04□□□□□ -0.48
USE1-204ENST00000594399 C22orf31O95567 290 aa12.04□□□□□ -0.48
USE1-204ENST00000594399 GNAT1P11488 350 aa12.04□□□□□ -0.48
USE1-204ENST00000594399 ASIC1P78348 528 aa12.04□□□□□ -0.48
USE1-204ENST00000594399 MDM2Q00987 491 aaPredicted RBP12.04□□□□□ -0.48
USE1-204ENST00000594399 DPYDQ12882 1025 aa12.04□□□□□ -0.48
USE1-204ENST00000594399 PNOCQ13519 176 aa12.04□□□□□ -0.48
USE1-204ENST00000594399 CUL4BQ13620 913 aa12.04□□□□□ -0.48
USE1-204ENST00000594399 NBPF20Q3BBV1 942 aa12.04□□□□□ -0.48
USE1-204ENST00000594399 ARSHQ5FYA8 562 aa12.04□□□□□ -0.48
USE1-204ENST00000594399 CNNM4Q6P4Q7 775 aa12.04□□□□□ -0.48
USE1-204ENST00000594399 NFRKBQ6P4R8 1299 aa12.04□□□□□ -0.48
USE1-204ENST00000594399 SESTD1Q86VW0 696 aa12.04□□□□□ -0.48
USE1-204ENST00000594399 ANKLE1Q8NAG6 615 aa12.04□□□□□ -0.48
USE1-204ENST00000594399 TRAPPC12Q8WVT3 735 aa12.04□□□□□ -0.48
USE1-204ENST00000594399 VTI1AQ96AJ9 217 aa12.04□□□□□ -0.48
USE1-204ENST00000594399 CEP89Q96ST8 783 aa12.04□□□□□ -0.48
USE1-204ENST00000594399 REEP2Q9BRK0 252 aa12.04□□□□□ -0.48
USE1-204ENST00000594399 BLZF1Q9H2G9 400 aa12.04□□□□□ -0.48
USE1-204ENST00000594399 DHX33Q9H6R0 707 aaKnown RBP12.04□□□□□ -0.48
USE1-204ENST00000594399 SETD4Q9NVD3 440 aa12.04□□□□□ -0.48
USE1-204ENST00000594399 TMEM63CQ9P1W3 806 aa12.04□□□□□ -0.48
USE1-204ENST00000594399 HDAC6Q9UBN7 1215 aa12.04□□□□□ -0.48
USE1-204ENST00000594399 ODF2LQ9ULJ1 636 aa12.04□□□□□ -0.48
USE1-204ENST00000594399 NPHP3-ACAD11A0A0J9YXS1 232 aa12.03□□□□□ -0.48
USE1-204ENST00000594399 MAGEB2O15479 319 aa12.03□□□□□ -0.48
USE1-204ENST00000594399 MAFO75444 373 aaPredicted RBP12.03□□□□□ -0.48
USE1-204ENST00000594399 SMC2O95347 1197 aa12.03□□□□□ -0.48
USE1-204ENST00000594399 CASP1P29466 404 aa12.03□□□□□ -0.48
USE1-204ENST00000594399 HOXC8P31273 242 aa12.03□□□□□ -0.48
USE1-204ENST00000594399 RAD51AP2Q09MP3 1159 aa12.03□□□□□ -0.48
USE1-204ENST00000594399 ITGA7Q13683 1181 aa12.03□□□□□ -0.48
USE1-204ENST00000594399 FAM47CQ5HY64 1035 aa12.03□□□□□ -0.48
USE1-204ENST00000594399 DYMQ7RTS9 669 aa12.03□□□□□ -0.48
USE1-204ENST00000594399 CCDC65Q8IXS2 484 aa12.03□□□□□ -0.48
USE1-204ENST00000594399 RETREG2Q8NC44 543 aa12.03□□□□□ -0.48
USE1-204ENST00000594399 PPP1R13LQ8WUF5 828 aa12.03□□□□□ -0.48
USE1-204ENST00000594399 SMARCE1Q969G3 411 aa12.03□□□□□ -0.48
USE1-204ENST00000594399 DNAJC19Q96DA6 116 aa12.03□□□□□ -0.48
USE1-204ENST00000594399 HTATIP2Q9BUP3 242 aa12.03□□□□□ -0.48
USE1-204ENST00000594399 XPNPEP1Q9NQW7 623 aa12.03□□□□□ -0.48
USE1-204ENST00000594399 PDLIM7Q9NR12 457 aa12.03□□□□□ -0.48
USE1-204ENST00000594399 GTF2IRD1Q9UHL9 959 aa12.03□□□□□ -0.48
USE1-204ENST00000594399 TUBE1Q9UJT0 475 aa12.03□□□□□ -0.48
USE1-204ENST00000594399 MBLAC1A4D2B0 266 aaPredicted RBP12.02□□□□□ -0.49
USE1-204ENST00000594399 HIP1RO75146 1068 aa12.02□□□□□ -0.49
USE1-204ENST00000594399 FAM13AO94988 1023 aa12.02□□□□□ -0.49
USE1-204ENST00000594399 IDEP14735 1019 aa12.02□□□□□ -0.49
USE1-204ENST00000594399 KLRC1P26715 233 aa12.02□□□□□ -0.49
USE1-204ENST00000594399 MNX1P50219 401 aaPredicted RBP12.02□□□□□ -0.49
USE1-204ENST00000594399 CACNB1Q02641 598 aaPredicted RBP12.02□□□□□ -0.49
USE1-204ENST00000594399 PTPN11Q06124 597 aaPredicted RBP12.02□□□□□ -0.49
USE1-204ENST00000594399 GIT2Q14161 759 aa12.02□□□□□ -0.49
USE1-204ENST00000594399 MARCH8Q5T0T0 291 aa12.02□□□□□ -0.49
USE1-204ENST00000594399 FAM102BQ5T8I3 360 aa12.02□□□□□ -0.49
USE1-204ENST00000594399 MTHFD1LQ6UB35 978 aa12.02□□□□□ -0.49
USE1-204ENST00000594399 UNC13DQ70J99 1090 aa12.02□□□□□ -0.49
USE1-204ENST00000594399 MAEAQ7L5Y9 396 aa12.02□□□□□ -0.49
USE1-204ENST00000594399 TCP11Q8WWU5 503 aa12.02□□□□□ -0.49
USE1-204ENST00000594399 KIFAP3Q92845 792 aa12.02□□□□□ -0.49
USE1-204ENST00000594399 ERCC4Q92889 916 aaPredicted RBP12.02□□□□□ -0.49
USE1-204ENST00000594399 CCDC47Q96A33 483 aaKnown RBP12.02□□□□□ -0.49
USE1-204ENST00000594399 DRC1Q96MC2 740 aa12.02□□□□□ -0.49
USE1-204ENST00000594399 SEZ6LQ9BYH1 1024 aa12.02□□□□□ -0.49
USE1-204ENST00000594399 POLR3FQ9H1D9 316 aaPredicted RBP12.02□□□□□ -0.49
USE1-204ENST00000594399 GPRC5CQ9NQ84 441 aa12.02□□□□□ -0.49
USE1-204ENST00000594399 EXOC1Q9NV70 894 aa12.02□□□□□ -0.49
USE1-204ENST00000594399 KIAA1468Q9P260 1216 aa12.02□□□□□ -0.49
USE1-204ENST00000594399 GRIN2DO15399 1336 aa12.02□□□□□ -0.49
USE1-204ENST00000594399 IGKV6-21A0A0C4DH24 114 aa12.01□□□□□ -0.49
USE1-204ENST00000594399 PVALEFA0A1B0GWK0 134 aa12.01□□□□□ -0.49
USE1-204ENST00000594399 FRMD3A2A2Y4 597 aa12.01□□□□□ -0.49
USE1-204ENST00000594399 RSPH10B2B2RC85 870 aa12.01□□□□□ -0.49
USE1-204ENST00000594399 ARVCFO00192 962 aa12.01□□□□□ -0.49
USE1-204ENST00000594399 RPN1P04843 607 aaKnown RBP12.01□□□□□ -0.49
USE1-204ENST00000594399 RSPH10BP0C881 870 aa12.01□□□□□ -0.49
USE1-204ENST00000594399 GAP43P17677 238 aa12.01□□□□□ -0.49
USE1-204ENST00000594399 TMOD1P28289 359 aa12.01□□□□□ -0.49
USE1-204ENST00000594399 DNM2P50570 870 aa12.01□□□□□ -0.49
USE1-204ENST00000594399 CLCN3P51790 818 aa12.01□□□□□ -0.49
USE1-204ENST00000594399 ADAM17P78536 824 aa12.01□□□□□ -0.49
USE1-204ENST00000594399 COASYQ13057 564 aa12.01□□□□□ -0.49
USE1-204ENST00000594399 MAPK7Q13164 816 aa12.01□□□□□ -0.49
USE1-204ENST00000594399 NT5DC1Q5TFE4 455 aa12.01□□□□□ -0.49
USE1-204ENST00000594399 GDF6Q6KF10 455 aaPredicted RBP12.01□□□□□ -0.49
USE1-204ENST00000594399 EFCAB12Q6NXP0 572 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms