RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 EFHBQ8N7U6 833 aa27.08■■□□□ 1.93
LSM4-202ENST00000593564 PPP1R16BQ96T49 567 aa27.08■■□□□ 1.93
LSM4-202ENST00000593564 POP1Q99575 1024 aaKnown RBP27.08■■□□□ 1.93
LSM4-202ENST00000593564 PCDHB12Q9Y5F1 795 aa27.08■■□□□ 1.93
LSM4-202ENST00000593564 EVPLQ92817 2033 aa27.07■■□□□ 1.92
LSM4-202ENST00000593564 C5orf42Q9H799 3197 aa27.07■■□□□ 1.92
LSM4-202ENST00000593564 TBKBP1A7MCY6 615 aa27.07■■□□□ 1.92
LSM4-202ENST00000593564 WDR64B1ANS9 1081 aa27.07■■□□□ 1.92
LSM4-202ENST00000593564 MAGEB2O15479 319 aa27.07■■□□□ 1.92
LSM4-202ENST00000593564 VTNP04004 478 aa27.07■■□□□ 1.92
LSM4-202ENST00000593564 IFNAR1P17181 557 aa27.07■■□□□ 1.92
LSM4-202ENST00000593564 NDUFV1P49821 464 aa27.07■■□□□ 1.92
LSM4-202ENST00000593564 FAM189BP81408 668 aa27.07■■□□□ 1.92
LSM4-202ENST00000593564 UBE3AQ05086 875 aa27.07■■□□□ 1.92
LSM4-202ENST00000593564 FAM102BQ5T8I3 360 aa27.07■■□□□ 1.92
LSM4-202ENST00000593564 TRMT1LQ7Z2T5 733 aaKnown RBP27.07■■□□□ 1.92
LSM4-202ENST00000593564 MSLNLQ96KJ4 702 aa27.07■■□□□ 1.92
LSM4-202ENST00000593564 SLC26A6Q9BXS9 759 aa27.07■■□□□ 1.92
LSM4-202ENST00000593564 UPF3BQ9BZI7 483 aaKnown RBP27.07■■□□□ 1.92
LSM4-202ENST00000593564 AAASQ9NRG9 546 aa27.07■■□□□ 1.92
LSM4-202ENST00000593564 SAMM50Q9Y512 469 aa27.07■■□□□ 1.92
LSM4-202ENST00000593564 EYA4O95677 639 aa27.06■■□□□ 1.92
LSM4-202ENST00000593564 PSMA5P28066 241 aa27.06■■□□□ 1.92
LSM4-202ENST00000593564 EVCP57679 992 aa27.06■■□□□ 1.92
LSM4-202ENST00000593564 ELAC1Q9H777 363 aaKnown RBP27.06■■□□□ 1.92
LSM4-202ENST00000593564 TMEM161AQ9NX61 479 aa27.06■■□□□ 1.92
LSM4-202ENST00000593564 MYH9P35579 1960 aaKnown RBP27.06■■□□□ 1.92
LSM4-202ENST00000593564 EDIL3O43854 480 aa27.05■■□□□ 1.92
LSM4-202ENST00000593564 PPFIA3O75145 1194 aa27.05■■□□□ 1.92
LSM4-202ENST00000593564 CLCN3P51790 818 aa27.05■■□□□ 1.92
LSM4-202ENST00000593564 DSC3Q14574 896 aa27.05■■□□□ 1.92
LSM4-202ENST00000593564 SPOUT1Q5T280 376 aaKnown RBP27.05■■□□□ 1.92
LSM4-202ENST00000593564 ZNF710Q8N1W2 664 aa27.05■■□□□ 1.92
LSM4-202ENST00000593564 LINC01465Q8N7H1 131 aa27.05■■□□□ 1.92
LSM4-202ENST00000593564 ATP6V0A4Q9HBG4 840 aa27.05■■□□□ 1.92
LSM4-202ENST00000593564 SH3GLB2Q9NR46 395 aa27.05■■□□□ 1.92
LSM4-202ENST00000593564 DISC1Q9NRI5 854 aa27.05■■□□□ 1.92
LSM4-202ENST00000593564 CLEC1BQ9P126 229 aa27.05■■□□□ 1.92
LSM4-202ENST00000593564 VPS54Q9P1Q0 977 aa27.05■■□□□ 1.92
LSM4-202ENST00000593564 MSH4O15457 936 aa27.04■■□□□ 1.92
LSM4-202ENST00000593564 REC8O95072 547 aa27.04■■□□□ 1.92
LSM4-202ENST00000593564 OATP04181 439 aa27.04■■□□□ 1.92
LSM4-202ENST00000593564 PDIA3P30101 505 aaKnown RBP27.04■■□□□ 1.92
LSM4-202ENST00000593564 NRIP1P48552 1158 aa27.04■■□□□ 1.92
LSM4-202ENST00000593564 USP11P51784 963 aa27.04■■□□□ 1.92
LSM4-202ENST00000593564 CSPP1Q1MSJ5 1256 aa27.04■■□□□ 1.92
LSM4-202ENST00000593564 CCDC136Q96JN2 1154 aa27.04■■□□□ 1.92
LSM4-202ENST00000593564 MAP7D2Q96T17 732 aa27.04■■□□□ 1.92
LSM4-202ENST00000593564 RIT2Q99578 217 aa27.04■■□□□ 1.92
LSM4-202ENST00000593564 FNDC1Q4ZHG4 1894 aaPredicted RBP27.04■■□□□ 1.92
LSM4-202ENST00000593564 ZNF862O60290 1169 aa27.03■■□□□ 1.92
LSM4-202ENST00000593564 TMOD1P28289 359 aa27.03■■□□□ 1.92
LSM4-202ENST00000593564 HOXD11P31277 338 aaPredicted RBP27.03■■□□□ 1.92
LSM4-202ENST00000593564 COASYQ13057 564 aa27.03■■□□□ 1.92
LSM4-202ENST00000593564 EFCAB12Q6NXP0 572 aa27.03■■□□□ 1.92
LSM4-202ENST00000593564 MUC6Q6W4X9 2439 aa27.03■■□□□ 1.92
LSM4-202ENST00000593564 SMRP1Q8NCR6 262 aa27.03■■□□□ 1.92
LSM4-202ENST00000593564 ADAMTS10Q9H324 1103 aa27.03■■□□□ 1.92
LSM4-202ENST00000593564 NCOA5Q9HCD5 579 aaKnown RBP27.03■■□□□ 1.92
LSM4-202ENST00000593564 NRBP2Q9NSY0 501 aa27.03■■□□□ 1.92
LSM4-202ENST00000593564 TYW1Q9NV66 732 aaKnown RBP27.03■■□□□ 1.92
LSM4-202ENST00000593564 AKT3Q9Y243 479 aa27.03■■□□□ 1.92
LSM4-202ENST00000593564 PCDHGC5Q9Y5F6 944 aa27.03■■□□□ 1.92
LSM4-202ENST00000593564 FGF18O76093 207 aa27.02■■□□□ 1.92
LSM4-202ENST00000593564 FGFR1P11362 822 aa27.02■■□□□ 1.92
LSM4-202ENST00000593564 SFNP31947 248 aa27.02■■□□□ 1.92
LSM4-202ENST00000593564 NLRP11P59045 1033 aaKnown RBP27.02■■□□□ 1.92
LSM4-202ENST00000593564 CCT2P78371 535 aaKnown RBP27.02■■□□□ 1.92
LSM4-202ENST00000593564 PRKCEQ02156 737 aa27.02■■□□□ 1.92
LSM4-202ENST00000593564 RBM23Q86U06 439 aaKnown RBP27.02■■□□□ 1.92
LSM4-202ENST00000593564 COLGALT1Q8NBJ5 622 aa27.02■■□□□ 1.92
LSM4-202ENST00000593564 SLC5A5Q92911 643 aa27.02■■□□□ 1.92
LSM4-202ENST00000593564 CWH43Q9H720 699 aa27.02■■□□□ 1.92
LSM4-202ENST00000593564 TLR9Q9NR96 1032 aa27.02■■□□□ 1.92
LSM4-202ENST00000593564 HCSTQ9UBK5 93 aa27.02■■□□□ 1.92
LSM4-202ENST00000593564 GAS7O60861 476 aa27.01■■□□□ 1.91
LSM4-202ENST00000593564 GLP2RO95838 553 aa27.01■■□□□ 1.91
LSM4-202ENST00000593564 LAG3P18627 525 aa27.01■■□□□ 1.91
LSM4-202ENST00000593564 EIF4BP23588 611 aaKnown RBP27.01■■□□□ 1.91
LSM4-202ENST00000593564 THNSL1Q8IYQ7 743 aa27.01■■□□□ 1.91
LSM4-202ENST00000593564 LRRC71Q8N4P6 559 aa27.01■■□□□ 1.91
LSM4-202ENST00000593564 MICAL1Q8TDZ2 1067 aa27.01■■□□□ 1.91
LSM4-202ENST00000593564 TMEM117Q9H0C3 514 aa27.01■■□□□ 1.91
LSM4-202ENST00000593564 TLE6Q9H808 572 aa27.01■■□□□ 1.91
LSM4-202ENST00000593564 PLXNA4Q9HCM2 1894 aa27.01■■□□□ 1.91
LSM4-202ENST00000593564 HOXA2O43364 376 aa27■■□□□ 1.91
LSM4-202ENST00000593564 JAK3P52333 1124 aa27■■□□□ 1.91
LSM4-202ENST00000593564 NLRP5P59047 1200 aa27■■□□□ 1.91
LSM4-202ENST00000593564 LRCH2Q5VUJ6 765 aa27■■□□□ 1.91
LSM4-202ENST00000593564 TEKT3Q9BXF9 490 aa27■■□□□ 1.91
LSM4-202ENST00000593564 C22orf23Q9BZE7 217 aa27■■□□□ 1.91
LSM4-202ENST00000593564 FSD2A1L4K1 749 aa26.99■■□□□ 1.91
LSM4-202ENST00000593564 CHMP2AO43633 222 aa26.99■■□□□ 1.91
LSM4-202ENST00000593564 UGCGQ16739 394 aa26.99■■□□□ 1.91
LSM4-202ENST00000593564 HERC4Q5GLZ8 1057 aaPredicted RBP26.99■■□□□ 1.91
LSM4-202ENST00000593564 PDE12Q6L8Q7 609 aaKnown RBP26.99■■□□□ 1.91
LSM4-202ENST00000593564 RUFY3Q7L099 469 aa26.99■■□□□ 1.91
LSM4-202ENST00000593564 RNF135Q8IUD6 432 aa26.99■■□□□ 1.91
LSM4-202ENST00000593564 TRIM22Q8IYM9 498 aa26.99■■□□□ 1.91
LSM4-202ENST00000593564 TBCKQ8TEA7 893 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms