RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 FAM184BQ9ULE4 1060 aa7.25□□□□□ -1.25
VPS4B-205ENST00000591383 NOL7Q9UMY1 257 aaKnown RBP7.25□□□□□ -1.25
VPS4B-205ENST00000591383 KBTBD13C9JR72 458 aa7.24□□□□□ -1.25
VPS4B-205ENST00000591383 DDX39AO00148 427 aaKnown RBP7.24□□□□□ -1.25
VPS4B-205ENST00000591383 MEN1O00255 615 aa7.24□□□□□ -1.25
VPS4B-205ENST00000591383 NOP56O00567 594 aaKnown RBP7.24□□□□□ -1.25
VPS4B-205ENST00000591383 NEMFO60524 1076 aa7.24□□□□□ -1.25
VPS4B-205ENST00000591383 CCNT1O60563 726 aaKnown RBP7.24□□□□□ -1.25
VPS4B-205ENST00000591383 MSCO60682 206 aa7.24□□□□□ -1.25
VPS4B-205ENST00000591383 STAM2O75886 525 aa7.24□□□□□ -1.25
VPS4B-205ENST00000591383 GGPS1O95749 300 aa7.24□□□□□ -1.25
VPS4B-205ENST00000591383 PGK1P00558 417 aa7.24□□□□□ -1.25
VPS4B-205ENST00000591383 GH1P01241 217 aa7.24□□□□□ -1.25
VPS4B-205ENST00000591383 C6orf222P0C671 652 aaPredicted RBP7.24□□□□□ -1.25
VPS4B-205ENST00000591383 SMPD1P17405 629 aa7.24□□□□□ -1.25
VPS4B-205ENST00000591383 SYT1P21579 422 aa7.24□□□□□ -1.25
VPS4B-205ENST00000591383 GNA15P30679 374 aa7.24□□□□□ -1.25
VPS4B-205ENST00000591383 LY6KQ17RY6 165 aa7.24□□□□□ -1.25
VPS4B-205ENST00000591383 CEP55Q53EZ4 464 aa7.24□□□□□ -1.25
VPS4B-205ENST00000591383 TMEM63BQ5T3F8 832 aa7.24□□□□□ -1.25
VPS4B-205ENST00000591383 C1orf53Q5VUE5 145 aa7.24□□□□□ -1.25
VPS4B-205ENST00000591383 TAPT1Q6NXT6 567 aa7.24□□□□□ -1.25
VPS4B-205ENST00000591383 VSIG10LQ86VR7 867 aa7.24□□□□□ -1.25
VPS4B-205ENST00000591383 PLA2G4DQ86XP0 818 aa7.24□□□□□ -1.25
VPS4B-205ENST00000591383 TREML1Q86YW5 311 aa7.24□□□□□ -1.25
VPS4B-205ENST00000591383 GPR152Q8TDT2 470 aa7.24□□□□□ -1.25
VPS4B-205ENST00000591383 U2AF1L4Q8WU68 220 aaKnown RBP7.24□□□□□ -1.25
VPS4B-205ENST00000591383 GPRASP2Q96D09 838 aa7.24□□□□□ -1.25
VPS4B-205ENST00000591383 CDHR1Q96JP9 859 aa7.24□□□□□ -1.25
VPS4B-205ENST00000591383 INPP4AQ96PE3 977 aaPredicted RBP7.24□□□□□ -1.25
VPS4B-205ENST00000591383 FOXP1Q9H334 677 aaPredicted RBP7.24□□□□□ -1.25
VPS4B-205ENST00000591383 SPC25Q9HBM1 224 aa7.24□□□□□ -1.25
VPS4B-205ENST00000591383 DDX25Q9UHL0 483 aaKnown RBP7.24□□□□□ -1.25
VPS4B-205ENST00000591383 DNAH12Q6ZR08 3092 aa7.24□□□□□ -1.25
VPS4B-205ENST00000591383 MYADML2A6NDP7 307 aa7.23□□□□□ -1.25
VPS4B-205ENST00000591383 FAM86B1E9PN63 330 aa7.23□□□□□ -1.25
VPS4B-205ENST00000591383 CHMP2AO43633 222 aa7.23□□□□□ -1.25
VPS4B-205ENST00000591383 STX6O43752 255 aa7.23□□□□□ -1.25
VPS4B-205ENST00000591383 SLC37A4O43826 429 aa7.23□□□□□ -1.25
VPS4B-205ENST00000591383 MARCH6O60337 910 aa7.23□□□□□ -1.25
VPS4B-205ENST00000591383 RGS20O76081 388 aa7.23□□□□□ -1.25
VPS4B-205ENST00000591383 FARP2O94887 1054 aaPredicted RBP7.23□□□□□ -1.25
VPS4B-205ENST00000591383 TFRCP02786 760 aaKnown RBP7.23□□□□□ -1.25
VPS4B-205ENST00000591383 MYL3P08590 195 aa7.23□□□□□ -1.25
VPS4B-205ENST00000591383 FAM86B2P0C5J1 330 aa7.23□□□□□ -1.25
VPS4B-205ENST00000591383 ZNF286BP0CG31 522 aa7.23□□□□□ -1.25
VPS4B-205ENST00000591383 GCFC2P16383 781 aaKnown RBP7.23□□□□□ -1.25
VPS4B-205ENST00000591383 ITGB5P18084 799 aa7.23□□□□□ -1.25
VPS4B-205ENST00000591383 TXLNAP40222 546 aa7.23□□□□□ -1.25
VPS4B-205ENST00000591383 SLC19A1P41440 591 aa7.23□□□□□ -1.25
VPS4B-205ENST00000591383 CHMP4BP1P59074 171 aa7.23□□□□□ -1.25
VPS4B-205ENST00000591383 BEX3Q00994 111 aa7.23□□□□□ -1.25
VPS4B-205ENST00000591383 ARHGAP1Q07960 439 aa7.23□□□□□ -1.25
VPS4B-205ENST00000591383 ORC1Q13415 861 aa7.23□□□□□ -1.25
VPS4B-205ENST00000591383 FSCN1Q16658 493 aaKnown RBP7.23□□□□□ -1.25
VPS4B-205ENST00000591383 FOXD4L6Q3SYB3 417 aaPredicted RBP7.23□□□□□ -1.25
VPS4B-205ENST00000591383 TTC38Q5R3I4 469 aa7.23□□□□□ -1.25
VPS4B-205ENST00000591383 FOXD4L3Q6VB84 417 aaPredicted RBP7.23□□□□□ -1.25
VPS4B-205ENST00000591383 DHX37Q8IY37 1157 aaKnown RBP7.23□□□□□ -1.25
VPS4B-205ENST00000591383 CYP2W1Q8TAV3 490 aa7.23□□□□□ -1.25
VPS4B-205ENST00000591383 FBF1Q8TES7 1133 aa7.23□□□□□ -1.25
VPS4B-205ENST00000591383 ITPKCQ96DU7 683 aa7.23□□□□□ -1.25
VPS4B-205ENST00000591383 NAP1L4Q99733 375 aaKnown RBP7.23□□□□□ -1.25
VPS4B-205ENST00000591383 MXRA8Q9BRK3 442 aa7.23□□□□□ -1.25
VPS4B-205ENST00000591383 SDF4Q9BRK5 362 aa7.23□□□□□ -1.25
VPS4B-205ENST00000591383 ZNF577Q9BSK1 485 aa7.23□□□□□ -1.25
VPS4B-205ENST00000591383 KLF16Q9BXK1 252 aaPredicted RBP7.23□□□□□ -1.25
VPS4B-205ENST00000591383 MLXIPQ9HAP2 919 aa7.23□□□□□ -1.25
VPS4B-205ENST00000591383 JADE2Q9NQC1 790 aa7.23□□□□□ -1.25
VPS4B-205ENST00000591383 KCNH7Q9NS40 1196 aa7.23□□□□□ -1.25
VPS4B-205ENST00000591383 MTMR6Q9Y217 621 aa7.23□□□□□ -1.25
VPS4B-205ENST00000591383 UBIAD1Q9Y5Z9 338 aa7.23□□□□□ -1.25
VPS4B-205ENST00000591383 WASF2Q9Y6W5 498 aa7.23□□□□□ -1.25
VPS4B-205ENST00000591383 IGLV3-22A0A075B6J6 115 aa7.22□□□□□ -1.25
VPS4B-205ENST00000591383 SPATA31C2B4DYI2 1134 aa7.22□□□□□ -1.25
VPS4B-205ENST00000591383 IPO5O00410 1097 aaKnown RBP7.22□□□□□ -1.25
VPS4B-205ENST00000591383 EIF1AYO14602 144 aaKnown RBP7.22□□□□□ -1.25
VPS4B-205ENST00000591383 NKRFO15226 690 aaKnown RBP eCLIP7.22□□□□□ -1.25
VPS4B-205ENST00000591383 DYNC1LI2O43237 492 aaPredicted RBP7.22□□□□□ -1.25
VPS4B-205ENST00000591383 GAS7O60861 476 aa7.22□□□□□ -1.25
VPS4B-205ENST00000591383 DUSP11O75319 330 aaKnown RBP7.22□□□□□ -1.25
VPS4B-205ENST00000591383 GJB1P08034 283 aa7.22□□□□□ -1.25
VPS4B-205ENST00000591383 CYP3A4P08684 503 aa7.22□□□□□ -1.25
VPS4B-205ENST00000591383 ARP10275 920 aa7.22□□□□□ -1.25
VPS4B-205ENST00000591383 KCNA2P16389 499 aa7.22□□□□□ -1.25
VPS4B-205ENST00000591383 PCSK2P16519 638 aa7.22□□□□□ -1.25
VPS4B-205ENST00000591383 MCM7P33993 719 aa7.22□□□□□ -1.25
VPS4B-205ENST00000591383 CPT1AP50416 773 aa7.22□□□□□ -1.25
VPS4B-205ENST00000591383 RESTQ13127 1097 aa7.22□□□□□ -1.25
VPS4B-205ENST00000591383 ITGB3BPQ13352 177 aaPredicted RBP7.22□□□□□ -1.25
VPS4B-205ENST00000591383 PKP1Q13835 747 aa7.22□□□□□ -1.25
VPS4B-205ENST00000591383 CALCRLQ16602 461 aa7.22□□□□□ -1.25
VPS4B-205ENST00000591383 DUSP28Q4G0W2 176 aa7.22□□□□□ -1.25
VPS4B-205ENST00000591383 BRDTQ58F21 947 aaPredicted RBP7.22□□□□□ -1.25
VPS4B-205ENST00000591383 LRCH2Q5VUJ6 765 aa7.22□□□□□ -1.25
VPS4B-205ENST00000591383 IQSEC1Q6DN90 963 aa7.22□□□□□ -1.25
VPS4B-205ENST00000591383 TMEM214Q6NUQ4 689 aaKnown RBP7.22□□□□□ -1.25
VPS4B-205ENST00000591383 KCNV1Q6PIU1 500 aa7.22□□□□□ -1.25
VPS4B-205ENST00000591383 CYFIP1Q7L576 1253 aa7.22□□□□□ -1.25
VPS4B-205ENST00000591383 NIPA1Q7RTP0 329 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms