RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 MYO1FO00160 1098 aa13.48□□□□□ -0.25
PDE4A-207ENST00000590407 TRAPPC3O43617 180 aa13.48□□□□□ -0.25
PDE4A-207ENST00000590407 PPP1R12BO60237 982 aaPredicted RBP13.48□□□□□ -0.25
PDE4A-207ENST00000590407 PPFIA2O75334 1257 aa13.48□□□□□ -0.25
PDE4A-207ENST00000590407 TBCAO75347 108 aaKnown RBP13.48□□□□□ -0.25
PDE4A-207ENST00000590407 RFX1P22670 979 aa13.48□□□□□ -0.25
PDE4A-207ENST00000590407 HNRNPH1P31943 449 aaKnown RBP13.48□□□□□ -0.25
PDE4A-207ENST00000590407 CTNNA1P35221 906 aaKnown RBP13.48□□□□□ -0.25
PDE4A-207ENST00000590407 PSMC2P35998 433 aaKnown RBP13.48□□□□□ -0.25
PDE4A-207ENST00000590407 DRG2P55039 364 aaKnown RBP13.48□□□□□ -0.25
PDE4A-207ENST00000590407 PSMC6P62333 389 aa13.48□□□□□ -0.25
PDE4A-207ENST00000590407 PRR16Q569H4 304 aa13.48□□□□□ -0.25
PDE4A-207ENST00000590407 SLFN13Q68D06 897 aa13.48□□□□□ -0.25
PDE4A-207ENST00000590407 CDC42EP5Q6NZY7 148 aa13.48□□□□□ -0.25
PDE4A-207ENST00000590407 TMC3Q7Z5M5 1100 aa13.48□□□□□ -0.25
PDE4A-207ENST00000590407 GMCL1P1Q8NEA9 526 aa13.48□□□□□ -0.25
PDE4A-207ENST00000590407 P3H4Q92791 437 aa13.48□□□□□ -0.25
PDE4A-207ENST00000590407 VTI1AQ96AJ9 217 aa13.48□□□□□ -0.25
PDE4A-207ENST00000590407 GMCL1Q96IK5 515 aa13.48□□□□□ -0.25
PDE4A-207ENST00000590407 RAB17Q9H0T7 212 aa13.48□□□□□ -0.25
PDE4A-207ENST00000590407 CARD9Q9H257 536 aa13.48□□□□□ -0.25
PDE4A-207ENST00000590407 ZHX3Q9H4I2 956 aa13.48□□□□□ -0.25
PDE4A-207ENST00000590407 TUFT1Q9NNX1 390 aa13.48□□□□□ -0.25
PDE4A-207ENST00000590407 A1CFQ9NQ94 594 aaKnown RBP13.48□□□□□ -0.25
PDE4A-207ENST00000590407 SYNPO2Q9UMS6 1093 aa13.48□□□□□ -0.25
PDE4A-207ENST00000590407 FRMPD4Q14CM0 1322 aa13.47□□□□□ -0.25
PDE4A-207ENST00000590407 UBR3Q6ZT12 1888 aa13.47□□□□□ -0.25
PDE4A-207ENST00000590407 LTBP4Q8N2S1 1624 aa13.47□□□□□ -0.25
PDE4A-207ENST00000590407 GMNCA6NCL1 334 aa13.47□□□□□ -0.25
PDE4A-207ENST00000590407 FAM187AA6NFU0 413 aa13.47□□□□□ -0.25
PDE4A-207ENST00000590407 C6orf229H3BNL8 230 aa13.47□□□□□ -0.25
PDE4A-207ENST00000590407 PIK3CDO00329 1044 aa13.47□□□□□ -0.25
PDE4A-207ENST00000590407 TGFB1I1O43294 461 aa13.47□□□□□ -0.25
PDE4A-207ENST00000590407 GYS1P13807 737 aa13.47□□□□□ -0.25
PDE4A-207ENST00000590407 GALCP54803 685 aa13.47□□□□□ -0.25
PDE4A-207ENST00000590407 RNASE9P60153 205 aaKnown RBP13.47□□□□□ -0.25
PDE4A-207ENST00000590407 PTENP60484 403 aa13.47□□□□□ -0.25
PDE4A-207ENST00000590407 DDR1Q08345 913 aa13.47□□□□□ -0.25
PDE4A-207ENST00000590407 MYBPC2Q14324 1141 aa13.47□□□□□ -0.25
PDE4A-207ENST00000590407 PPP2R5AQ15172 486 aa13.47□□□□□ -0.25
PDE4A-207ENST00000590407 ENOX2Q16206 610 aaKnown RBP13.47□□□□□ -0.25
PDE4A-207ENST00000590407 SKIDA1Q1XH10 827 aa13.47□□□□□ -0.25
PDE4A-207ENST00000590407 APOBEC3HQ6NTF7 200 aaKnown RBP13.47□□□□□ -0.25
PDE4A-207ENST00000590407 TAX1BP1Q86VP1 789 aa13.47□□□□□ -0.25
PDE4A-207ENST00000590407 CENPTQ96BT3 561 aa13.47□□□□□ -0.25
PDE4A-207ENST00000590407 CNOT10Q9H9A5 744 aaKnown RBP13.47□□□□□ -0.25
PDE4A-207ENST00000590407 ACTR5Q9H9F9 607 aaPredicted RBP13.47□□□□□ -0.25
PDE4A-207ENST00000590407 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.47□□□□□ -0.25
PDE4A-207ENST00000590407 AJAP1Q9UKB5 411 aaPredicted RBP13.47□□□□□ -0.25
PDE4A-207ENST00000590407 UTP11Q9Y3A2 253 aaKnown RBP13.47□□□□□ -0.25
PDE4A-207ENST00000590407 SIPA1L1O43166 1804 aa13.46□□□□□ -0.25
PDE4A-207ENST00000590407 TMCO5BA8MYB1 307 aa13.46□□□□□ -0.25
PDE4A-207ENST00000590407 F8VZ95 297 aa13.46□□□□□ -0.25
PDE4A-207ENST00000590407 DDX3YO15523 660 aaKnown RBP13.46□□□□□ -0.25
PDE4A-207ENST00000590407 EVI5O60447 810 aa13.46□□□□□ -0.25
PDE4A-207ENST00000590407 HSPA6P17066 643 aa13.46□□□□□ -0.25
PDE4A-207ENST00000590407 PPP2R2AP63151 447 aa13.46□□□□□ -0.25
PDE4A-207ENST00000590407 DCAF17Q5H9S7 520 aaPredicted RBP13.46□□□□□ -0.25
PDE4A-207ENST00000590407 BTNL9Q6UXG8 535 aa13.46□□□□□ -0.25
PDE4A-207ENST00000590407 DAAM2Q86T65 1068 aa13.46□□□□□ -0.25
PDE4A-207ENST00000590407 LNX1Q8TBB1 728 aaPredicted RBP13.46□□□□□ -0.25
PDE4A-207ENST00000590407 TEKT1Q969V4 418 aa13.46□□□□□ -0.25
PDE4A-207ENST00000590407 CYFIP2Q96F07 1278 aa13.46□□□□□ -0.25
PDE4A-207ENST00000590407 P2RX7Q99572 595 aaKnown RBP13.46□□□□□ -0.25
PDE4A-207ENST00000590407 RUSC1Q9BVN2 902 aa13.46□□□□□ -0.25
PDE4A-207ENST00000590407 AP1M1Q9BXS5 423 aa13.46□□□□□ -0.25
PDE4A-207ENST00000590407 DDX47Q9H0S4 455 aaKnown RBP13.46□□□□□ -0.25
PDE4A-207ENST00000590407 NEUROG2Q9H2A3 272 aa13.46□□□□□ -0.25
PDE4A-207ENST00000590407 DNAJC18Q9H819 358 aa13.46□□□□□ -0.25
PDE4A-207ENST00000590407 VCPKMTQ9H867 229 aa13.46□□□□□ -0.25
PDE4A-207ENST00000590407 DMAC2Q9NW81 257 aa13.46□□□□□ -0.25
PDE4A-207ENST00000590407 KCND2Q9NZV8 630 aa13.46□□□□□ -0.25
PDE4A-207ENST00000590407 RABGAP1Q9Y3P9 1069 aa13.46□□□□□ -0.25
PDE4A-207ENST00000590407 ZMYM2Q9UBW7 1377 aa13.45□□□□□ -0.26
PDE4A-207ENST00000590407 SPDYE3A6NKU9 549 aa13.45□□□□□ -0.26
PDE4A-207ENST00000590407 FAM86B1E9PN63 330 aa13.45□□□□□ -0.26
PDE4A-207ENST00000590407 MPHOSPH10O00566 681 aaKnown RBP13.45□□□□□ -0.26
PDE4A-207ENST00000590407 MSH4O15457 936 aa13.45□□□□□ -0.26
PDE4A-207ENST00000590407 GCNT3O95395 438 aa13.45□□□□□ -0.26
PDE4A-207ENST00000590407 NUDT17P0C025 328 aa13.45□□□□□ -0.26
PDE4A-207ENST00000590407 FAM86B2P0C5J1 330 aa13.45□□□□□ -0.26
PDE4A-207ENST00000590407 EEF2P13639 858 aaKnown RBP13.45□□□□□ -0.26
PDE4A-207ENST00000590407 GBP1P32455 592 aa13.45□□□□□ -0.26
PDE4A-207ENST00000590407 CASP4P49662 377 aa13.45□□□□□ -0.26
PDE4A-207ENST00000590407 ZNF131P52739 623 aa13.45□□□□□ -0.26
PDE4A-207ENST00000590407 SMTNP53814 917 aa13.45□□□□□ -0.26
PDE4A-207ENST00000590407 HDLBPQ00341 1268 aaKnown RBP13.45□□□□□ -0.26
PDE4A-207ENST00000590407 ACTN3Q08043 901 aaPredicted RBP13.45□□□□□ -0.26
PDE4A-207ENST00000590407 TRAF1Q13077 416 aa13.45□□□□□ -0.26
PDE4A-207ENST00000590407 RINT1Q6NUQ1 792 aa13.45□□□□□ -0.26
PDE4A-207ENST00000590407 KCNV1Q6PIU1 500 aa13.45□□□□□ -0.26
PDE4A-207ENST00000590407 STXBP4Q6ZWJ1 553 aa13.45□□□□□ -0.26
PDE4A-207ENST00000590407 SLC9A9Q8IVB4 645 aa13.45□□□□□ -0.26
PDE4A-207ENST00000590407 FAM186BQ8IYM0 893 aa13.45□□□□□ -0.26
PDE4A-207ENST00000590407 U2AF1L4Q8WU68 220 aaKnown RBP13.45□□□□□ -0.26
PDE4A-207ENST00000590407 TMEM174Q8WUU8 243 aa13.45□□□□□ -0.26
PDE4A-207ENST00000590407 TLCD1Q96CP7 247 aa13.45□□□□□ -0.26
PDE4A-207ENST00000590407 CABS1Q96KC9 395 aa13.45□□□□□ -0.26
PDE4A-207ENST00000590407 ZDHHC15Q96MV8 337 aa13.45□□□□□ -0.26
PDE4A-207ENST00000590407 EIF2AK1Q9BQI3 630 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms