RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 WDR19Q8NEZ3 1342 aa16.42■□□□□ 0.22
CIRBP-228ENST00000590347 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.42■□□□□ 0.22
CIRBP-228ENST00000590347 USP46P62068 366 aa16.42■□□□□ 0.22
CIRBP-228ENST00000590347 MCL1Q07820 350 aa16.42■□□□□ 0.22
CIRBP-228ENST00000590347 PEX26Q7Z412 305 aa16.42■□□□□ 0.22
CIRBP-228ENST00000590347 ECHDC2Q86YB7 292 aa16.42■□□□□ 0.22
CIRBP-228ENST00000590347 ATP8B4Q8TF62 1192 aa16.42■□□□□ 0.22
CIRBP-228ENST00000590347 ABTB1Q969K4 478 aaPredicted RBP16.42■□□□□ 0.22
CIRBP-228ENST00000590347 GBP5Q96PP8 586 aa16.42■□□□□ 0.22
CIRBP-228ENST00000590347 KRT23Q9C075 422 aa16.42■□□□□ 0.22
CIRBP-228ENST00000590347 MYLK2Q9H1R3 596 aa16.42■□□□□ 0.22
CIRBP-228ENST00000590347 LRRC42Q9Y546 428 aa16.42■□□□□ 0.22
CIRBP-228ENST00000590347 INF2Q27J81 1249 aa16.42■□□□□ 0.22
CIRBP-228ENST00000590347 TEX9Q8N6V9 391 aa16.42■□□□□ 0.22
CIRBP-228ENST00000590347 SCOCQ9UIL1 159 aa16.42■□□□□ 0.22
CIRBP-228ENST00000590347 TMEM59LQ9UK28 342 aa16.42■□□□□ 0.22
CIRBP-228ENST00000590347 PTPN22Q9Y2R2 807 aa16.42■□□□□ 0.22
CIRBP-228ENST00000590347 CDK17Q00537 523 aa16.41■□□□□ 0.22
CIRBP-228ENST00000590347 ETNK2Q9NVF9 386 aa16.41■□□□□ 0.22
CIRBP-228ENST00000590347 RNF14Q9UBS8 474 aa16.41■□□□□ 0.22
CIRBP-228ENST00000590347 MPP2Q14168 576 aa16.41■□□□□ 0.22
CIRBP-228ENST00000590347 SEPT2Q15019 361 aa16.41■□□□□ 0.22
CIRBP-228ENST00000590347 DBN1Q16643 649 aa16.41■□□□□ 0.22
CIRBP-228ENST00000590347 TSNAXIP1Q2TAA8 658 aa16.41■□□□□ 0.22
CIRBP-228ENST00000590347 ASRGL1Q7L266 308 aa16.41■□□□□ 0.22
CIRBP-228ENST00000590347 ZBTB38Q8NAP3 1195 aaPredicted RBP16.41■□□□□ 0.22
CIRBP-228ENST00000590347 DNAJC1Q96KC8 554 aaKnown RBP16.41■□□□□ 0.22
CIRBP-228ENST00000590347 KIAA1683Q9H0B3 1180 aa16.41■□□□□ 0.22
CIRBP-228ENST00000590347 DENND2DQ9H6A0 471 aaPredicted RBP16.41■□□□□ 0.22
CIRBP-228ENST00000590347 CHORDC1Q9UHD1 332 aaPredicted RBP16.41■□□□□ 0.22
CIRBP-228ENST00000590347 PCDHGA4Q9Y5G9 962 aa16.41■□□□□ 0.22
CIRBP-228ENST00000590347 A0A1W2PQJ5 194 aa16.41■□□□□ 0.22
CIRBP-228ENST00000590347 PFDN1O60925 122 aa16.41■□□□□ 0.22
CIRBP-228ENST00000590347 RHOBTB3O94955 611 aa16.41■□□□□ 0.22
CIRBP-228ENST00000590347 ACBD5Q5T8D3 534 aaPredicted RBP16.41■□□□□ 0.22
CIRBP-228ENST00000590347 OLFML2BQ68BL8 750 aa16.41■□□□□ 0.22
CIRBP-228ENST00000590347 DTHD1Q6ZMT9 781 aa16.41■□□□□ 0.22
CIRBP-228ENST00000590347 BARGINQ6ZT62 677 aa16.41■□□□□ 0.22
CIRBP-228ENST00000590347 EXOC3L1Q86VI1 746 aa16.41■□□□□ 0.22
CIRBP-228ENST00000590347 TTLL11Q8NHH1 800 aa16.41■□□□□ 0.22
CIRBP-228ENST00000590347 CYP39A1Q9NYL5 469 aa16.41■□□□□ 0.22
CIRBP-228ENST00000590347 NVLO15381 856 aaKnown RBP16.4■□□□□ 0.22
CIRBP-228ENST00000590347 OATP04181 439 aa16.4■□□□□ 0.22
CIRBP-228ENST00000590347 ABCD1P33897 745 aa16.4■□□□□ 0.22
CIRBP-228ENST00000590347 ZNF131P52739 623 aa16.4■□□□□ 0.22
CIRBP-228ENST00000590347 BPIFB4P59827 614 aa16.4■□□□□ 0.22
CIRBP-228ENST00000590347 EXOC3L4Q17RC7 722 aa16.4■□□□□ 0.22
CIRBP-228ENST00000590347 P3H1Q32P28 736 aa16.4■□□□□ 0.22
CIRBP-228ENST00000590347 KHDC1Q4VXA5 237 aaKnown RBP16.4■□□□□ 0.22
CIRBP-228ENST00000590347 NELFCDQ8IXH7 590 aa16.4■□□□□ 0.22
CIRBP-228ENST00000590347 ATL2Q8NHH9 583 aa16.4■□□□□ 0.22
CIRBP-228ENST00000590347 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.4■□□□□ 0.224e-8■■□□□ 13.3
CIRBP-228ENST00000590347 CHMP2BQ9UQN3 213 aa16.4■□□□□ 0.22
CIRBP-228ENST00000590347 GSG1L2A8MUP6 293 aa16.4■□□□□ 0.22
CIRBP-228ENST00000590347 LCA5LO95447 670 aa16.4■□□□□ 0.22
CIRBP-228ENST00000590347 GNA14O95837 355 aa16.4■□□□□ 0.22
CIRBP-228ENST00000590347 CYP1A1P04798 512 aaPredicted RBP16.4■□□□□ 0.22
CIRBP-228ENST00000590347 PLCG2P16885 1265 aa16.4■□□□□ 0.22
CIRBP-228ENST00000590347 CGB2Q6NT52 195 aa16.4■□□□□ 0.22
CIRBP-228ENST00000590347 TRIM42Q8IWZ5 723 aa16.4■□□□□ 0.22
CIRBP-228ENST00000590347 ARHGEF2Q92974 986 aaKnown RBP16.4■□□□□ 0.22
CIRBP-228ENST00000590347 TGS1Q96RS0 853 aaKnown RBP16.4■□□□□ 0.22
CIRBP-228ENST00000590347 VCXQ9H320 206 aa16.4■□□□□ 0.22
CIRBP-228ENST00000590347 AFPP02771 609 aaKnown RBP16.39■□□□□ 0.21
CIRBP-228ENST00000590347 ABCB4P21439 1286 aa16.39■□□□□ 0.21
CIRBP-228ENST00000590347 HNRNPH3P31942 346 aaKnown RBP16.39■□□□□ 0.21
CIRBP-228ENST00000590347 INTS8Q75QN2 995 aaKnown RBP16.39■□□□□ 0.21
CIRBP-228ENST00000590347 FAM114A1Q8IWE2 563 aa16.39■□□□□ 0.21
CIRBP-228ENST00000590347 RMI1Q9H9A7 625 aa16.39■□□□□ 0.21
CIRBP-228ENST00000590347 TMOD4Q9NZQ9 345 aa16.39■□□□□ 0.21
CIRBP-228ENST00000590347 ARL2BPQ9Y2Y0 163 aa16.39■□□□□ 0.21
CIRBP-228ENST00000590347 PKD1L3Q7Z443 1732 aa16.39■□□□□ 0.21
CIRBP-228ENST00000590347 WTIPA6NIX2 430 aaPredicted RBP16.39■□□□□ 0.21
CIRBP-228ENST00000590347 RASGRF2O14827 1237 aa16.39■□□□□ 0.21
CIRBP-228ENST00000590347 KRT36O76013 467 aa16.39■□□□□ 0.21
CIRBP-228ENST00000590347 RASA1P20936 1047 aa16.39■□□□□ 0.21
CIRBP-228ENST00000590347 MRRFQ96E11 262 aaKnown RBP16.39■□□□□ 0.21
CIRBP-228ENST00000590347 DHTKD1Q96HY7 919 aaPredicted RBP16.39■□□□□ 0.21
CIRBP-228ENST00000590347 TBC1D10AQ9BXI6 508 aa16.39■□□□□ 0.21
CIRBP-228ENST00000590347 TRIM9Q9C026 710 aa16.39■□□□□ 0.21
CIRBP-228ENST00000590347 OSGEPQ9NPF4 335 aa16.39■□□□□ 0.21
CIRBP-228ENST00000590347 KLHL14Q9P2G3 628 aa16.39■□□□□ 0.21
CIRBP-228ENST00000590347 FAM196BA6NMK8 535 aa16.39■□□□□ 0.21
CIRBP-228ENST00000590347 CRKLP46109 303 aaKnown RBP16.39■□□□□ 0.21
CIRBP-228ENST00000590347 CACNB1Q02641 598 aaPredicted RBP16.39■□□□□ 0.21
CIRBP-228ENST00000590347 PTK2Q05397 1052 aa16.39■□□□□ 0.21
CIRBP-228ENST00000590347 ITPK1Q13572 414 aa16.39■□□□□ 0.21
CIRBP-228ENST00000590347 RCN1Q15293 331 aa16.39■□□□□ 0.21
CIRBP-228ENST00000590347 ZSCAN29Q8IWY8 852 aaPredicted RBP16.39■□□□□ 0.21
CIRBP-228ENST00000590347 SRBD1Q8N5C6 995 aaKnown RBP16.39■□□□□ 0.21
CIRBP-228ENST00000590347 ENAHQ8N8S7 591 aaPredicted RBP16.39■□□□□ 0.21
CIRBP-228ENST00000590347 NRG4Q8WWG1 115 aa16.39■□□□□ 0.21
CIRBP-228ENST00000590347 SCG3Q8WXD2 468 aaKnown RBP16.39■□□□□ 0.21
CIRBP-228ENST00000590347 TNFRSF25Q93038 417 aa16.39■□□□□ 0.21
CIRBP-228ENST00000590347 OPTNQ96CV9 577 aa16.39■□□□□ 0.21
CIRBP-228ENST00000590347 RBM17Q96I25 401 aaKnown RBP16.39■□□□□ 0.21
CIRBP-228ENST00000590347 RNF26Q9BY78 433 aaPredicted RBP16.39■□□□□ 0.21
CIRBP-228ENST00000590347 RXFP1Q9HBX9 757 aa16.39■□□□□ 0.21
CIRBP-228ENST00000590347 SLCO1B3Q9NPD5 702 aa16.39■□□□□ 0.21
CIRBP-228ENST00000590347 AFDNP55196 1824 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms