RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 ACTN4O43707 911 aaKnown RBP13.42□□□□□ -0.26
APOC1-206ENST00000590334 B4GALT4O60513 344 aa13.42□□□□□ -0.26
APOC1-206ENST00000590334 ZNF202O95125 648 aa13.42□□□□□ -0.26
APOC1-206ENST00000590334 SLFN14P0C7P3 912 aa13.42□□□□□ -0.26
APOC1-206ENST00000590334 ATN1P54259 1190 aaPredicted RBP13.42□□□□□ -0.26
APOC1-206ENST00000590334 IGBP1P78318 339 aa13.42□□□□□ -0.26
APOC1-206ENST00000590334 ZNF200P98182 395 aaPredicted RBP13.42□□□□□ -0.26
APOC1-206ENST00000590334 TBC1D8BQ0IIM8 1120 aa13.42□□□□□ -0.26
APOC1-206ENST00000590334 PTK7Q13308 1070 aa13.42□□□□□ -0.26
APOC1-206ENST00000590334 MCM6Q14566 821 aa13.42□□□□□ -0.26
APOC1-206ENST00000590334 PTGISQ16647 500 aa13.42□□□□□ -0.26
APOC1-206ENST00000590334 LONRF3Q496Y0 759 aa13.42□□□□□ -0.26
APOC1-206ENST00000590334 ARSHQ5FYA8 562 aa13.42□□□□□ -0.26
APOC1-206ENST00000590334 RINT1Q6NUQ1 792 aa13.42□□□□□ -0.26
APOC1-206ENST00000590334 PADI6Q6TGC4 694 aa13.42□□□□□ -0.26
APOC1-206ENST00000590334 C1orf186Q6ZWK4 172 aa13.42□□□□□ -0.26
APOC1-206ENST00000590334 RPAINQ86UA6 219 aa13.42□□□□□ -0.26
APOC1-206ENST00000590334 RETREG2Q8NC44 543 aa13.42□□□□□ -0.26
APOC1-206ENST00000590334 SLC7A3Q8WY07 619 aa13.42□□□□□ -0.26
APOC1-206ENST00000590334 DHX58Q96C10 678 aa13.42□□□□□ -0.26
APOC1-206ENST00000590334 CCDC43Q96MW1 224 aaKnown RBP13.42□□□□□ -0.26
APOC1-206ENST00000590334 TIPINQ9BVW5 301 aa13.42□□□□□ -0.26
APOC1-206ENST00000590334 TNMDQ9H2S6 317 aa13.42□□□□□ -0.26
APOC1-206ENST00000590334 LTBP2Q14767 1821 aa13.41□□□□□ -0.26
APOC1-206ENST00000590334 TLR3O15455 904 aaKnown RBP13.41□□□□□ -0.26
APOC1-206ENST00000590334 RPLP2P05387 115 aaKnown RBP13.41□□□□□ -0.26
APOC1-206ENST00000590334 LIG1P18858 919 aa13.41□□□□□ -0.26
APOC1-206ENST00000590334 CYP11B2P19099 503 aa13.41□□□□□ -0.26
APOC1-206ENST00000590334 GUCY2CP25092 1073 aa13.41□□□□□ -0.26
APOC1-206ENST00000590334 MCM4P33991 863 aa13.41□□□□□ -0.26
APOC1-206ENST00000590334 POLGP54098 1239 aaPredicted RBP13.41□□□□□ -0.26
APOC1-206ENST00000590334 RTP1P59025 263 aa13.41□□□□□ -0.26
APOC1-206ENST00000590334 TRIM60Q495X7 471 aa13.41□□□□□ -0.26
APOC1-206ENST00000590334 EFCAB12Q6NXP0 572 aa13.41□□□□□ -0.26
APOC1-206ENST00000590334 TAF2Q6P1X5 1199 aa13.41□□□□□ -0.26
APOC1-206ENST00000590334 CNNM4Q6P4Q7 775 aa13.41□□□□□ -0.26
APOC1-206ENST00000590334 SV2BQ7L1I2 683 aa13.41□□□□□ -0.26
APOC1-206ENST00000590334 MCPH1Q8NEM0 835 aa13.41□□□□□ -0.26
APOC1-206ENST00000590334 TIGD1Q96MW7 591 aa13.41□□□□□ -0.26
APOC1-206ENST00000590334 TRPV6Q9H1D0 765 aa13.41□□□□□ -0.26
APOC1-206ENST00000590334 ATP6V0A4Q9HBG4 840 aa13.41□□□□□ -0.26
APOC1-206ENST00000590334 XPNPEP1Q9NQW7 623 aa13.41□□□□□ -0.26
APOC1-206ENST00000590334 TRMT13Q9NUP7 481 aaKnown RBP13.41□□□□□ -0.26
APOC1-206ENST00000590334 SERTAD1Q9UHV2 236 aa13.41□□□□□ -0.26
APOC1-206ENST00000590334 DCDC2CA8MYV0 355 aa13.4□□□□□ -0.26
APOC1-206ENST00000590334 USO1O60763 962 aaKnown RBP13.4□□□□□ -0.26
APOC1-206ENST00000590334 NR1I2O75469 434 aa13.4□□□□□ -0.26
APOC1-206ENST00000590334 CYP2C9P11712 490 aa13.4□□□□□ -0.26
APOC1-206ENST00000590334 TLE2Q04725 743 aa13.4□□□□□ -0.26
APOC1-206ENST00000590334 RBL2Q08999 1139 aa13.4□□□□□ -0.26
APOC1-206ENST00000590334 FAAP100Q0VG06 881 aa13.4□□□□□ -0.26
APOC1-206ENST00000590334 MKRN4PQ13434 485 aaPredicted RBP13.4□□□□□ -0.26
APOC1-206ENST00000590334 EMC2Q15006 297 aa13.4□□□□□ -0.26
APOC1-206ENST00000590334 TRIM71Q2Q1W2 868 aaKnown RBP13.4□□□□□ -0.26
APOC1-206ENST00000590334 RUFY4Q6ZNE9 571 aa13.4□□□□□ -0.26
APOC1-206ENST00000590334 KRBA2Q6ZNG9 492 aa13.4□□□□□ -0.26
APOC1-206ENST00000590334 SH3RF1Q7Z6J0 888 aa13.4□□□□□ -0.26
APOC1-206ENST00000590334 ELOA2Q8IYF1 753 aaPredicted RBP13.4□□□□□ -0.26
APOC1-206ENST00000590334 CEP57L1Q8IYX8 460 aa13.4□□□□□ -0.26
APOC1-206ENST00000590334 KIAA0319LQ8IZA0 1049 aa13.4□□□□□ -0.26
APOC1-206ENST00000590334 ZBTB10Q96DT7 871 aa13.4□□□□□ -0.26
APOC1-206ENST00000590334 MTRQ99707 1265 aa13.4□□□□□ -0.26
APOC1-206ENST00000590334 RUSC1Q9BVN2 902 aa13.4□□□□□ -0.26
APOC1-206ENST00000590334 LRRC27Q9C0I9 530 aa13.4□□□□□ -0.26
APOC1-206ENST00000590334 MYMKA6NI61 221 aa13.39□□□□□ -0.27
APOC1-206ENST00000590334 PQBP1O60828 265 aaKnown RBP13.39□□□□□ -0.27
APOC1-206ENST00000590334 CAND2O75155 1236 aa13.39□□□□□ -0.27
APOC1-206ENST00000590334 SSBP05455 408 aaKnown RBP eCLIP13.39□□□□□ -0.27
APOC1-206ENST00000590334 TMOD1P28289 359 aa13.39□□□□□ -0.27
APOC1-206ENST00000590334 ARL2P36404 184 aa13.39□□□□□ -0.27
APOC1-206ENST00000590334 DNM2P50570 870 aa13.39□□□□□ -0.27
APOC1-206ENST00000590334 AMPD3Q01432 767 aa13.39□□□□□ -0.27
APOC1-206ENST00000590334 TPRNQ4KMQ1 711 aa13.39□□□□□ -0.27
APOC1-206ENST00000590334 IER5Q5VY09 327 aa13.39□□□□□ -0.27
APOC1-206ENST00000590334 KANK3Q6NY19 840 aa13.39□□□□□ -0.27
APOC1-206ENST00000590334 GPBP1Q86WP2 473 aa13.39□□□□□ -0.27
APOC1-206ENST00000590334 ZNF710Q8N1W2 664 aa13.39□□□□□ -0.27
APOC1-206ENST00000590334 NME8Q8N427 588 aa13.39□□□□□ -0.27
APOC1-206ENST00000590334 TCP11Q8WWU5 503 aa13.39□□□□□ -0.27
APOC1-206ENST00000590334 DHX38Q92620 1227 aaKnown RBP13.39□□□□□ -0.27
APOC1-206ENST00000590334 WNT8BQ93098 351 aa13.39□□□□□ -0.27
APOC1-206ENST00000590334 C7orf25Q9BPX7 421 aa13.39□□□□□ -0.27
APOC1-206ENST00000590334 ODF2LQ9ULJ1 636 aa13.39□□□□□ -0.27
APOC1-206ENST00000590334 ATP11BQ9Y2G3 1177 aa13.39□□□□□ -0.27
APOC1-206ENST00000590334 PITPNM1O00562 1244 aa13.38□□□□□ -0.27
APOC1-206ENST00000590334 MYL1P05976 194 aa13.38□□□□□ -0.27
APOC1-206ENST00000590334 CLCN3P51790 818 aa13.38□□□□□ -0.27
APOC1-206ENST00000590334 MDM2Q00987 491 aaPredicted RBP13.38□□□□□ -0.27
APOC1-206ENST00000590334 MAPK7Q13164 816 aa13.38□□□□□ -0.27
APOC1-206ENST00000590334 DRP2Q13474 957 aa13.38□□□□□ -0.27
APOC1-206ENST00000590334 GIT2Q14161 759 aa13.38□□□□□ -0.27
APOC1-206ENST00000590334 DHX8Q14562 1220 aaKnown RBP13.38□□□□□ -0.27
APOC1-206ENST00000590334 DAW1Q8N136 415 aa13.38□□□□□ -0.27
APOC1-206ENST00000590334 LRRC71Q8N4P6 559 aa13.38□□□□□ -0.27
APOC1-206ENST00000590334 METTL13Q8N6R0 699 aa13.38□□□□□ -0.27
APOC1-206ENST00000590334 CNNM3Q8NE01 707 aa13.38□□□□□ -0.27
APOC1-206ENST00000590334 CAGE1Q8TC20 777 aa13.38□□□□□ -0.27
APOC1-206ENST00000590334 DNAJB3Q8WWF6 145 aa13.38□□□□□ -0.27
APOC1-206ENST00000590334 DDX12PQ92771 950 aa13.38□□□□□ -0.27
APOC1-206ENST00000590334 KIFAP3Q92845 792 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms