RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-226ENST00000590171 TMEM192Q8IY95 271 aa23.16■■□□□ 1.3
CIRBP-226ENST00000590171 FIBCD1Q8N539 461 aa23.16■■□□□ 1.3
CIRBP-226ENST00000590171 BANK1Q8NDB2 785 aa23.16■■□□□ 1.3
CIRBP-226ENST00000590171 MAP7D2Q96T17 732 aa23.16■■□□□ 1.3
CIRBP-226ENST00000590171 AKT3Q9Y243 479 aa23.16■■□□□ 1.3
CIRBP-226ENST00000590171 PRRC2BQ5JSZ5 2229 aaKnown RBP23.15■■□□□ 1.3
CIRBP-226ENST00000590171 BTBD18B2RXH4 712 aa23.15■■□□□ 1.3
CIRBP-226ENST00000590171 TBX3O15119 743 aa23.15■■□□□ 1.3
CIRBP-226ENST00000590171 LINC00271P0C7V0 271 aa23.15■■□□□ 1.3
CIRBP-226ENST00000590171 TMOD1P28289 359 aa23.15■■□□□ 1.3
CIRBP-226ENST00000590171 TBC1D8BQ0IIM8 1120 aa23.15■■□□□ 1.3
CIRBP-226ENST00000590171 MTERF2Q49AM1 385 aa23.15■■□□□ 1.3
CIRBP-226ENST00000590171 FAM228AQ86W67 206 aa23.15■■□□□ 1.3
CIRBP-226ENST00000590171 NPAS4Q8IUM7 802 aa23.15■■□□□ 1.3
CIRBP-226ENST00000590171 CCDC83Q8IWF9 413 aa23.15■■□□□ 1.3
CIRBP-226ENST00000590171 DIS3L2Q8IYB7 885 aaKnown RBP23.15■■□□□ 1.3
CIRBP-226ENST00000590171 CEP89Q96ST8 783 aa23.15■■□□□ 1.3
CIRBP-226ENST00000590171 SH2D3AQ9BRG2 576 aa23.15■■□□□ 1.3
CIRBP-226ENST00000590171 NIFKQ9BYG3 293 aaKnown RBP23.15■■□□□ 1.3
CIRBP-226ENST00000590171 ST3GAL5Q9UNP4 418 aa23.15■■□□□ 1.3
CIRBP-226ENST00000590171 WDR81Q562E7 1941 aa23.14■■□□□ 1.3
CIRBP-226ENST00000590171 GPR182O15218 404 aa23.14■■□□□ 1.29
CIRBP-226ENST00000590171 NLRP11P59045 1033 aaKnown RBP23.14■■□□□ 1.29
CIRBP-226ENST00000590171 TRIM29Q14134 588 aa23.14■■□□□ 1.29
CIRBP-226ENST00000590171 ASB2Q96Q27 587 aa23.14■■□□□ 1.29
CIRBP-226ENST00000590171 ADAMTS10Q9H324 1103 aa23.14■■□□□ 1.29
CIRBP-226ENST00000590171 H3BNC9 293 aa23.13■■□□□ 1.29
CIRBP-226ENST00000590171 PSMC5P62195 406 aa23.13■■□□□ 1.29
CIRBP-226ENST00000590171 MRPS5P82675 430 aaKnown RBP23.13■■□□□ 1.29
CIRBP-226ENST00000590171 BTG3Q14201 252 aaPredicted RBP23.13■■□□□ 1.29
CIRBP-226ENST00000590171 ODR4Q5SWX8 454 aa23.13■■□□□ 1.29
CIRBP-226ENST00000590171 ZNF668Q96K58 619 aaPredicted RBP23.13■■□□□ 1.29
CIRBP-226ENST00000590171 LOXHD1Q8IVV2 1947 aa23.13■■□□□ 1.29
CIRBP-226ENST00000590171 TTC3P53804 2025 aa23.13■■□□□ 1.29
CIRBP-226ENST00000590171 DDX11L8A8MPP1 907 aa23.12■■□□□ 1.29
CIRBP-226ENST00000590171 WNT7AO00755 349 aa23.12■■□□□ 1.29
CIRBP-226ENST00000590171 STAG3L1P0CL83 205 aa23.12■■□□□ 1.29
CIRBP-226ENST00000590171 VCANP13611 3396 aa23.12■■□□□ 1.29
CIRBP-226ENST00000590171 CTNNB1P35222 781 aa23.12■■□□□ 1.29
CIRBP-226ENST00000590171 SARSP49591 514 aaKnown RBP23.12■■□□□ 1.29
CIRBP-226ENST00000590171 GPC3P51654 580 aa23.12■■□□□ 1.29
CIRBP-226ENST00000590171 TFF2Q03403 129 aa23.12■■□□□ 1.29
CIRBP-226ENST00000590171 SPIRE1Q08AE8 756 aa23.12■■□□□ 1.29
CIRBP-226ENST00000590171 DRP2Q13474 957 aa23.12■■□□□ 1.29
CIRBP-226ENST00000590171 GPM6BQ13491 265 aa23.12■■□□□ 1.29
CIRBP-226ENST00000590171 FAM43BQ6ZT52 329 aaPredicted RBP23.12■■□□□ 1.29
CIRBP-226ENST00000590171 ANO5Q75V66 913 aa23.12■■□□□ 1.29
CIRBP-226ENST00000590171 SYMPKQ92797 1274 aaKnown RBP23.12■■□□□ 1.29
CIRBP-226ENST00000590171 ADAM2Q99965 735 aa23.12■■□□□ 1.29
CIRBP-226ENST00000590171 RGS18Q9NS28 235 aa23.12■■□□□ 1.29
CIRBP-226ENST00000590171 WRAP73Q9P2S5 460 aaPredicted RBP23.12■■□□□ 1.29
CIRBP-226ENST00000590171 EVPLQ92817 2033 aa23.11■■□□□ 1.29
CIRBP-226ENST00000590171 IGKV6-21A0A0C4DH24 114 aa23.11■■□□□ 1.29
CIRBP-226ENST00000590171 DENND3A2RUS2 1198 aa23.11■■□□□ 1.29
CIRBP-226ENST00000590171 MARCH6O60337 910 aa23.11■■□□□ 1.29
CIRBP-226ENST00000590171 IBSPP21815 317 aaPredicted RBP23.11■■□□□ 1.29
CIRBP-226ENST00000590171 QARSP47897 775 aaKnown RBP23.11■■□□□ 1.29
CIRBP-226ENST00000590171 RBM25P49756 843 aaKnown RBP23.11■■□□□ 1.29
CIRBP-226ENST00000590171 GUCY1B3Q02153 619 aa23.11■■□□□ 1.29
CIRBP-226ENST00000590171 PLA2G4FQ68DD2 849 aa23.11■■□□□ 1.29
CIRBP-226ENST00000590171 SLFN12Q8IYM2 578 aa23.11■■□□□ 1.29
CIRBP-226ENST00000590171 CLP1Q92989 425 aaKnown RBP23.11■■□□□ 1.29
CIRBP-226ENST00000590171 LLPHQ9BRT6 129 aaKnown RBP23.11■■□□□ 1.29
CIRBP-226ENST00000590171 C9IYK1 514 aa23.1■■□□□ 1.29
CIRBP-226ENST00000590171 C5orf67F2Z3F1 127 aa23.1■■□□□ 1.29
CIRBP-226ENST00000590171 BMPR1AP36894 532 aa23.1■■□□□ 1.29
CIRBP-226ENST00000590171 GATMP50440 423 aa23.1■■□□□ 1.29
CIRBP-226ENST00000590171 DSC3Q14574 896 aa23.1■■□□□ 1.29
CIRBP-226ENST00000590171 EPHA7Q15375 998 aa23.1■■□□□ 1.29
CIRBP-226ENST00000590171 NCAPH2Q6IBW4 605 aa23.1■■□□□ 1.29
CIRBP-226ENST00000590171 CMTR2Q8IYT2 770 aaKnown RBP23.1■■□□□ 1.29
CIRBP-226ENST00000590171 ZNF710Q8N1W2 664 aa23.1■■□□□ 1.29
CIRBP-226ENST00000590171 MRPL38Q96DV4 380 aaKnown RBP23.1■■□□□ 1.29
CIRBP-226ENST00000590171 ZSCAN31Q96LW9 406 aaPredicted RBP23.1■■□□□ 1.29
CIRBP-226ENST00000590171 C1orf112Q9NSG2 853 aa23.1■■□□□ 1.29
CIRBP-226ENST00000590171 LRFN2Q9ULH4 789 aa23.1■■□□□ 1.29
CIRBP-226ENST00000590171 RWDD3Q9Y3V2 267 aa23.1■■□□□ 1.29
CIRBP-226ENST00000590171 MRPL42Q9Y6G3 142 aaKnown RBP23.1■■□□□ 1.29
CIRBP-226ENST00000590171 REV3LO60673 3130 aa23.1■■□□□ 1.29
CIRBP-226ENST00000590171 RALGAPA2Q2PPJ7 1873 aa23.09■■□□□ 1.29
CIRBP-226ENST00000590171 SPTBN5Q9NRC6 3674 aaKnown RBP23.09■■□□□ 1.29
CIRBP-226ENST00000590171 MAFO75444 373 aaPredicted RBP23.09■■□□□ 1.29
CIRBP-226ENST00000590171 BAG4O95429 457 aaKnown RBP23.09■■□□□ 1.29
CIRBP-226ENST00000590171 P4HBP07237 508 aaKnown RBP23.09■■□□□ 1.29
CIRBP-226ENST00000590171 EIF4BP23588 611 aaKnown RBP23.09■■□□□ 1.29
CIRBP-226ENST00000590171 PAN2Q504Q3 1202 aaKnown RBP23.09■■□□□ 1.29
CIRBP-226ENST00000590171 SLC24A5Q71RS6 500 aa23.09■■□□□ 1.29
CIRBP-226ENST00000590171 LXNQ9BS40 222 aa23.09■■□□□ 1.29
CIRBP-226ENST00000590171 COG5Q9UP83 839 aa23.09■■□□□ 1.29
CIRBP-226ENST00000590171 NLRC5Q86WI3 1866 aa23.09■■□□□ 1.29
CIRBP-226ENST00000590171 DKC1O60832 514 aaKnown RBP eCLIP23.08■■□□□ 1.29
CIRBP-226ENST00000590171 RB1P06400 928 aa23.08■■□□□ 1.29
CIRBP-226ENST00000590171 DARSP14868 501 aaKnown RBP23.08■■□□□ 1.29
CIRBP-226ENST00000590171 NPEPPSP55786 919 aa23.08■■□□□ 1.29
CIRBP-226ENST00000590171 CALCRLQ16602 461 aa23.08■■□□□ 1.29
CIRBP-226ENST00000590171 PTPROQ16827 1216 aa23.08■■□□□ 1.29
CIRBP-226ENST00000590171 NLRP7Q8WX94 980 aa23.08■■□□□ 1.29
CIRBP-226ENST00000590171 HLA-CQ95604 372 aa23.08■■□□□ 1.29
CIRBP-226ENST00000590171 DYDC2Q96IM9 177 aa23.08■■□□□ 1.29
CIRBP-226ENST00000590171 C8orf76Q96K31 380 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms