RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 TM4SF5O14894 197 aa7.07□□□□□ -1.28
VPS25-204ENST00000589577 LAMTOR5O43504 91 aa7.07□□□□□ -1.28
VPS25-204ENST00000589577 ORC4O43929 436 aa7.07□□□□□ -1.28
VPS25-204ENST00000589577 SLC3A2P08195 630 aaKnown RBP7.07□□□□□ -1.28
VPS25-204ENST00000589577 FGRP09769 529 aa7.07□□□□□ -1.28
VPS25-204ENST00000589577 NCLP19338 710 aaKnown RBP7.07□□□□□ -1.28
VPS25-204ENST00000589577 KCNA4P22459 653 aa7.07□□□□□ -1.28
VPS25-204ENST00000589577 HOXA13P31271 388 aaPredicted RBP7.07□□□□□ -1.28
VPS25-204ENST00000589577 PPM1AP35813 382 aa7.07□□□□□ -1.28
VPS25-204ENST00000589577 STARD6P59095 220 aa7.07□□□□□ -1.28
VPS25-204ENST00000589577 IRX6P78412 446 aaPredicted RBP7.07□□□□□ -1.28
VPS25-204ENST00000589577 MRPS9P82933 396 aaKnown RBP7.07□□□□□ -1.28
VPS25-204ENST00000589577 PPFIA1Q13136 1202 aa7.07□□□□□ -1.28
VPS25-204ENST00000589577 LETM2Q2VYF4 491 aa7.07□□□□□ -1.28
VPS25-204ENST00000589577 DCLRE1AQ6PJP8 1040 aa7.07□□□□□ -1.28
VPS25-204ENST00000589577 RSPH3Q86UC2 560 aa7.07□□□□□ -1.28
VPS25-204ENST00000589577 TMEM173Q86WV6 379 aaPredicted RBP7.07□□□□□ -1.28
VPS25-204ENST00000589577 MCF2L2Q86YR7 1114 aa7.07□□□□□ -1.28
VPS25-204ENST00000589577 SIRT2Q8IXJ6 389 aa7.07□□□□□ -1.28
VPS25-204ENST00000589577 ADGRF4Q8IZF3 695 aa7.07□□□□□ -1.28
VPS25-204ENST00000589577 SLC39A11Q8N1S5 342 aa7.07□□□□□ -1.28
VPS25-204ENST00000589577 TMEM40Q8WWA1 233 aa7.07□□□□□ -1.28
VPS25-204ENST00000589577 ATRIPQ8WXE1 791 aa7.07□□□□□ -1.28
VPS25-204ENST00000589577 MAP4K1Q92918 833 aa7.07□□□□□ -1.28
VPS25-204ENST00000589577 ZNF558Q96NG5 402 aa7.07□□□□□ -1.28
VPS25-204ENST00000589577 CASD1Q96PB1 797 aa7.07□□□□□ -1.28
VPS25-204ENST00000589577 MYADMQ96S97 322 aa7.07□□□□□ -1.28
VPS25-204ENST00000589577 DDX23Q9BUQ8 820 aaKnown RBP7.07□□□□□ -1.28
VPS25-204ENST00000589577 FAM49AQ9H0Q0 323 aaPredicted RBP7.07□□□□□ -1.28
VPS25-204ENST00000589577 NAPBQ9H115 298 aa7.07□□□□□ -1.28
VPS25-204ENST00000589577 ZBP1Q9H171 429 aa7.07□□□□□ -1.28
VPS25-204ENST00000589577 SFXN1Q9H9B4 322 aa7.07□□□□□ -1.28
VPS25-204ENST00000589577 RGS18Q9NS28 235 aa7.07□□□□□ -1.28
VPS25-204ENST00000589577 SPATA6Q9NWH7 488 aaPredicted RBP7.07□□□□□ -1.28
VPS25-204ENST00000589577 EPS15L1Q9UBC2 864 aa7.07□□□□□ -1.28
VPS25-204ENST00000589577 TRPV2Q9Y5S1 764 aa7.07□□□□□ -1.28
VPS25-204ENST00000589577 ADAMTS20P59510 1910 aa7.07□□□□□ -1.28
VPS25-204ENST00000589577 KDM3AQ9Y4C1 1321 aa7.06□□□□□ -1.28
VPS25-204ENST00000589577 KALRNO60229 2985 aa7.06□□□□□ -1.28
VPS25-204ENST00000589577 MTCL1Q9Y4B5 1905 aaKnown RBP7.06□□□□□ -1.28
VPS25-204ENST00000589577 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.06□□□□□ -1.28
VPS25-204ENST00000589577 SPATA31C2B4DYI2 1134 aa7.06□□□□□ -1.28
VPS25-204ENST00000589577 TAF4O00268 1085 aa7.06□□□□□ -1.28
VPS25-204ENST00000589577 TBC1D4O60343 1298 aa7.06□□□□□ -1.28
VPS25-204ENST00000589577 PPP1R11O60927 126 aaPredicted RBP7.06□□□□□ -1.28
VPS25-204ENST00000589577 TDGF1P13385 188 aa7.06□□□□□ -1.28
VPS25-204ENST00000589577 MARK3P27448 753 aa7.06□□□□□ -1.28
VPS25-204ENST00000589577 SP4Q02446 784 aa7.06□□□□□ -1.28
VPS25-204ENST00000589577 PTPN14Q15678 1187 aa7.06□□□□□ -1.28
VPS25-204ENST00000589577 LPAL2Q16609 132 aa7.06□□□□□ -1.28
VPS25-204ENST00000589577 IER5Q5VY09 327 aa7.06□□□□□ -1.28
VPS25-204ENST00000589577 PRR23CQ6ZRP0 262 aa7.06□□□□□ -1.28
VPS25-204ENST00000589577 SLC24A5Q71RS6 500 aa7.06□□□□□ -1.28
VPS25-204ENST00000589577 CABP7Q86V35 215 aa7.06□□□□□ -1.28
VPS25-204ENST00000589577 ST13P5Q8NFI4 369 aaPredicted RBP7.06□□□□□ -1.28
VPS25-204ENST00000589577 INPP4AQ96PE3 977 aaPredicted RBP7.06□□□□□ -1.28
VPS25-204ENST00000589577 ADAM2Q99965 735 aa7.06□□□□□ -1.28
VPS25-204ENST00000589577 CELF4Q9BZC1 486 aaKnown RBP7.06□□□□□ -1.28
VPS25-204ENST00000589577 NACAP1Q9BZK3 213 aa7.06□□□□□ -1.28
VPS25-204ENST00000589577 CDHR5Q9HBB8 845 aa7.06□□□□□ -1.28
VPS25-204ENST00000589577 PRMT8Q9NR22 394 aaPredicted RBP7.06□□□□□ -1.28
VPS25-204ENST00000589577 SLC2A4RGQ9NR83 387 aa7.06□□□□□ -1.28
VPS25-204ENST00000589577 SEMA4GQ9NTN9 838 aa7.06□□□□□ -1.28
VPS25-204ENST00000589577 TCP11L1Q9NUJ3 509 aa7.06□□□□□ -1.28
VPS25-204ENST00000589577 TMEM161AQ9NX61 479 aa7.06□□□□□ -1.28
VPS25-204ENST00000589577 SPG21Q9NZD8 308 aa7.06□□□□□ -1.28
VPS25-204ENST00000589577 ANAPC4Q9UJX5 808 aa7.06□□□□□ -1.28
VPS25-204ENST00000589577 GMEB2Q9UKD1 530 aa7.06□□□□□ -1.28
VPS25-204ENST00000589577 LHX6Q9UPM6 363 aa7.06□□□□□ -1.28
VPS25-204ENST00000589577 WASF3Q9UPY6 502 aa7.06□□□□□ -1.28
VPS25-204ENST00000589577 IRAK3Q9Y616 596 aa7.06□□□□□ -1.28
VPS25-204ENST00000589577 FRMPD4Q14CM0 1322 aa7.05□□□□□ -1.28
VPS25-204ENST00000589577 COL4A2P08572 1712 aa7.05□□□□□ -1.28
VPS25-204ENST00000589577 NT5C1B-RDH14C9J2C7 533 aa7.05□□□□□ -1.28
VPS25-204ENST00000589577 ANHXE9PGG2 379 aa7.05□□□□□ -1.28
VPS25-204ENST00000589577 CXCL14O95715 111 aa7.05□□□□□ -1.28
VPS25-204ENST00000589577 CCND2P30279 289 aa7.05□□□□□ -1.28
VPS25-204ENST00000589577 TCF7P36402 384 aaPredicted RBP7.05□□□□□ -1.28
VPS25-204ENST00000589577 IGBP1P78318 339 aa7.05□□□□□ -1.28
VPS25-204ENST00000589577 FAM189BP81408 668 aa7.05□□□□□ -1.28
VPS25-204ENST00000589577 KRT17Q04695 432 aa7.05□□□□□ -1.28
VPS25-204ENST00000589577 NFX1Q12986 1120 aaKnown RBP7.05□□□□□ -1.28
VPS25-204ENST00000589577 HTR4Q13639 388 aa7.05□□□□□ -1.28
VPS25-204ENST00000589577 GPATCH4Q5T3I0 446 aaKnown RBP7.05□□□□□ -1.28
VPS25-204ENST00000589577 C20orf194Q5TEA3 1177 aa7.05□□□□□ -1.28
VPS25-204ENST00000589577 TSHZ3Q63HK5 1081 aa7.05□□□□□ -1.28
VPS25-204ENST00000589577 LAIR1Q6GTX8 287 aa7.05□□□□□ -1.28
VPS25-204ENST00000589577 C15orf39Q6ZRI6 1047 aa7.05□□□□□ -1.28
VPS25-204ENST00000589577 LRRC43Q8N309 656 aa7.05□□□□□ -1.28
VPS25-204ENST00000589577 BCL7CQ8WUZ0 217 aaPredicted RBP7.05□□□□□ -1.28
VPS25-204ENST00000589577 TRAPPC12Q8WVT3 735 aa7.05□□□□□ -1.28
VPS25-204ENST00000589577 VN1R3Q9BXE9 311 aa7.05□□□□□ -1.28
VPS25-204ENST00000589577 TMEM117Q9H0C3 514 aa7.05□□□□□ -1.28
VPS25-204ENST00000589577 JMJD4Q9H9V9 463 aa7.05□□□□□ -1.28
VPS25-204ENST00000589577 C1orf112Q9NSG2 853 aa7.05□□□□□ -1.28
VPS25-204ENST00000589577 MRPL11Q9Y3B7 192 aaKnown RBP7.05□□□□□ -1.28
VPS25-204ENST00000589577 NOC2LQ9Y3T9 749 aaKnown RBP7.05□□□□□ -1.28
VPS25-204ENST00000589577 BAZ2BQ9UIF8 2168 aaKnown RBP7.05□□□□□ -1.28
VPS25-204ENST00000589577 CLUHO75153 1309 aa7.04□□□□□ -1.28
VPS25-204ENST00000589577 TICRRQ7Z2Z1 1910 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms