RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 TMEM260Q9NX78 707 aa4.17□□□□□ -1.74
ZNF540-207ENST00000589285 PARD3Q8TEW0 1356 aa4.17□□□□□ -1.74
ZNF540-207ENST00000589285 RASSF10A6NK89 507 aa4.17□□□□□ -1.74
ZNF540-207ENST00000589285 SCDO00767 359 aa4.17□□□□□ -1.74
ZNF540-207ENST00000589285 CKMP06732 381 aa4.17□□□□□ -1.74
ZNF540-207ENST00000589285 C8BP07358 591 aa4.17□□□□□ -1.74
ZNF540-207ENST00000589285 TMEM253P0C7T8 217 aa4.17□□□□□ -1.74
ZNF540-207ENST00000589285 ID4P47928 161 aa4.17□□□□□ -1.74
ZNF540-207ENST00000589285 LINC00310P59036 64 aa4.17□□□□□ -1.74
ZNF540-207ENST00000589285 SLC39A6Q13433 755 aa4.17□□□□□ -1.74
ZNF540-207ENST00000589285 KCNA10Q16322 511 aa4.17□□□□□ -1.74
ZNF540-207ENST00000589285 PIK3R6Q5UE93 754 aa4.17□□□□□ -1.74
ZNF540-207ENST00000589285 FAM129CQ86XR2 697 aa4.17□□□□□ -1.74
ZNF540-207ENST00000589285 FBXO15Q8NCQ5 510 aaPredicted RBP4.17□□□□□ -1.74
ZNF540-207ENST00000589285 ADAM7Q9H2U9 754 aa4.17□□□□□ -1.74
ZNF540-207ENST00000589285 AFF2P51816 1311 aa4.17□□□□□ -1.74
ZNF540-207ENST00000589285 CCER2I3L3R5 266 aa4.17□□□□□ -1.74
ZNF540-207ENST00000589285 M0R2C6 588 aa4.17□□□□□ -1.74
ZNF540-207ENST00000589285 CDC45O75419 566 aa4.17□□□□□ -1.74
ZNF540-207ENST00000589285 DGKIO75912 1065 aa4.17□□□□□ -1.74
ZNF540-207ENST00000589285 FARP2O94887 1054 aaPredicted RBP4.17□□□□□ -1.74
ZNF540-207ENST00000589285 ANXA1P04083 346 aa4.17□□□□□ -1.74
ZNF540-207ENST00000589285 PAK1Q13153 545 aa4.17□□□□□ -1.74
ZNF540-207ENST00000589285 SNX17Q15036 470 aa4.17□□□□□ -1.74
ZNF540-207ENST00000589285 CR1LQ2VPA4 569 aa4.17□□□□□ -1.74
ZNF540-207ENST00000589285 SMIM5Q71RC9 77 aa4.17□□□□□ -1.74
ZNF540-207ENST00000589285 TMEFF1Q8IYR6 380 aa4.17□□□□□ -1.74
ZNF540-207ENST00000589285 JMYQ8N9B5 988 aa4.17□□□□□ -1.74
ZNF540-207ENST00000589285 YIPF4Q9BSR8 244 aa4.17□□□□□ -1.74
ZNF540-207ENST00000589285 CRTAC1Q9NQ79 661 aa4.17□□□□□ -1.74
ZNF540-207ENST00000589285 DSEQ9UL01 958 aa4.17□□□□□ -1.74
ZNF540-207ENST00000589285 SPATA31A3Q5VYP0 1347 aa4.17□□□□□ -1.74
ZNF540-207ENST00000589285 EDC4Q6P2E9 1401 aaKnown RBP4.17□□□□□ -1.74
ZNF540-207ENST00000589285 MAN2B1O00754 1011 aa4.16□□□□□ -1.74
ZNF540-207ENST00000589285 EIF2S2P20042 333 aaKnown RBP4.16□□□□□ -1.74
ZNF540-207ENST00000589285 SUMO1P63165 101 aaKnown RBP4.16□□□□□ -1.74
ZNF540-207ENST00000589285 E4F1Q66K89 784 aaPredicted RBP4.16□□□□□ -1.74
ZNF540-207ENST00000589285 NRAPQ86VF7 1730 aa4.16□□□□□ -1.74
ZNF540-207ENST00000589285 IFNL3Q8IZI9 196 aa4.16□□□□□ -1.74
ZNF540-207ENST00000589285 ZSWIM2Q8NEG5 633 aa4.16□□□□□ -1.74
ZNF540-207ENST00000589285 RAPGEF4Q8WZA2 1011 aa4.16□□□□□ -1.74
ZNF540-207ENST00000589285 MAGEB10Q96LZ2 347 aaPredicted RBP4.16□□□□□ -1.74
ZNF540-207ENST00000589285 UCKL1Q9NWZ5 548 aa4.16□□□□□ -1.74
ZNF540-207ENST00000589285 FMN2Q9NZ56 1722 aa4.16□□□□□ -1.74
ZNF540-207ENST00000589285 FAN1Q9Y2M0 1017 aa4.16□□□□□ -1.74
ZNF540-207ENST00000589285 IRAK3Q9Y616 596 aa4.16□□□□□ -1.74
ZNF540-207ENST00000589285 LRP6O75581 1613 aa4.16□□□□□ -1.74
ZNF540-207ENST00000589285 HGSO14964 777 aaPredicted RBP4.16□□□□□ -1.74
ZNF540-207ENST00000589285 N4BP3O15049 544 aa4.16□□□□□ -1.74
ZNF540-207ENST00000589285 CANXP27824 592 aaKnown RBP4.16□□□□□ -1.74
ZNF540-207ENST00000589285 GPR85P60893 370 aa4.16□□□□□ -1.74
ZNF540-207ENST00000589285 YBX1P67809 324 aaKnown RBP4.16□□□□□ -1.74
ZNF540-207ENST00000589285 MTHFSDQ2M296 383 aaKnown RBP4.16□□□□□ -1.74
ZNF540-207ENST00000589285 ZNF530Q6P9A1 599 aaPredicted RBP4.16□□□□□ -1.74
ZNF540-207ENST00000589285 LIPIQ6XZB0 460 aa4.16□□□□□ -1.74
ZNF540-207ENST00000589285 OTOP3Q7RTS5 596 aa4.16□□□□□ -1.74
ZNF540-207ENST00000589285 STRA8Q7Z7C7 330 aa4.16□□□□□ -1.74
ZNF540-207ENST00000589285 UBE2Q2Q8WVN8 375 aa4.16□□□□□ -1.74
ZNF540-207ENST00000589285 ALG1Q9BT22 464 aa4.16□□□□□ -1.74
ZNF540-207ENST00000589285 TRPC5Q9UL62 973 aaPredicted RBP4.16□□□□□ -1.74
ZNF540-207ENST00000589285 CNOT6Q9ULM6 557 aaKnown RBP4.16□□□□□ -1.74
ZNF540-207ENST00000589285 RREB1Q92766 1687 aa4.16□□□□□ -1.74
ZNF540-207ENST00000589285 CPSF1Q10570 1443 aaKnown RBP4.15□□□□□ -1.74
ZNF540-207ENST00000589285 PNPLA6Q8IY17 1366 aa4.15□□□□□ -1.74
ZNF540-207ENST00000589285 NUAK1O60285 661 aa4.15□□□□□ -1.74
ZNF540-207ENST00000589285 SLC9A1P19634 815 aa4.15□□□□□ -1.74
ZNF540-207ENST00000589285 CFPP27918 469 aa4.15□□□□□ -1.74
ZNF540-207ENST00000589285 TMEM132BQ14DG7 1078 aa4.15□□□□□ -1.74
ZNF540-207ENST00000589285 ACAP1Q15027 740 aa4.15□□□□□ -1.74
ZNF540-207ENST00000589285 KIZQ2M2Z5 673 aa4.15□□□□□ -1.74
ZNF540-207ENST00000589285 ACBD5Q5T8D3 534 aaPredicted RBP4.15□□□□□ -1.74
ZNF540-207ENST00000589285 PKN3Q6P5Z2 889 aa4.15□□□□□ -1.74
ZNF540-207ENST00000589285 LHFPL2Q6ZUX7 228 aa4.15□□□□□ -1.74
ZNF540-207ENST00000589285 ARHGEF25Q86VW2 580 aa4.15□□□□□ -1.74
ZNF540-207ENST00000589285 GSTCDQ8NEC7 633 aa4.15□□□□□ -1.74
ZNF540-207ENST00000589285 SAMD15Q9P1V8 674 aa4.15□□□□□ -1.74
ZNF540-207ENST00000589285 X6R8D5 127 aa4.15□□□□□ -1.74
ZNF540-207ENST00000589285 RGPD1P0DJD0 1748 aa4.15□□□□□ -1.74
ZNF540-207ENST00000589285 MYOM1P52179 1685 aa4.15□□□□□ -1.74
ZNF540-207ENST00000589285 PLCH1Q4KWH8 1693 aa4.15□□□□□ -1.74
ZNF540-207ENST00000589285 DISP2A7MBM2 1401 aa4.15□□□□□ -1.74
ZNF540-207ENST00000589285 MYCLP1P12525 358 aaPredicted RBP4.15□□□□□ -1.75
ZNF540-207ENST00000589285 IL13P35225 146 aa4.15□□□□□ -1.75
ZNF540-207ENST00000589285 MAPKAPK2P49137 400 aa4.15□□□□□ -1.75
ZNF540-207ENST00000589285 GYS2P54840 703 aa4.15□□□□□ -1.75
ZNF540-207ENST00000589285 ST5P78524 1137 aa4.15□□□□□ -1.75
ZNF540-207ENST00000589285 LRRTM3Q86VH5 581 aa4.15□□□□□ -1.75
ZNF540-207ENST00000589285 CILP2Q8IUL8 1156 aa4.15□□□□□ -1.75
ZNF540-207ENST00000589285 FNIP1Q8TF40 1166 aa4.15□□□□□ -1.75
ZNF540-207ENST00000589285 LEO1Q8WVC0 666 aaPredicted RBP4.15□□□□□ -1.75
ZNF540-207ENST00000589285 RTF1Q92541 710 aaKnown RBP4.15□□□□□ -1.75
ZNF540-207ENST00000589285 TNNQ9UQP3 1299 aa4.15□□□□□ -1.75
ZNF540-207ENST00000589285 COA3Q9Y2R0 106 aaPredicted RBP4.15□□□□□ -1.75
ZNF540-207ENST00000589285 PCDHB4Q9Y5E5 795 aa4.15□□□□□ -1.75
ZNF540-207ENST00000589285 PRAMEF22A3QJZ6 481 aa4.15□□□□□ -1.75
ZNF540-207ENST00000589285 ARVCFO00192 962 aa4.15□□□□□ -1.75
ZNF540-207ENST00000589285 KCNQ3O43525 872 aa4.15□□□□□ -1.75
ZNF540-207ENST00000589285 BCAR3O75815 825 aa4.15□□□□□ -1.75
ZNF540-207ENST00000589285 LRG1P02750 347 aa4.15□□□□□ -1.75
ZNF540-207ENST00000589285 ADCY8P40145 1251 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms