RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 CATSPERZQ9NTU4 200 aa4.97□□□□□ -1.61
SMAD4-207ENST00000589076 FAM184BQ9ULE4 1060 aa4.97□□□□□ -1.61
SMAD4-207ENST00000589076 PRKAB1Q9Y478 270 aa4.97□□□□□ -1.61
SMAD4-207ENST00000589076 AQP7O14520 342 aa4.96□□□□□ -1.62
SMAD4-207ENST00000589076 ADCY8P40145 1251 aa4.96□□□□□ -1.62
SMAD4-207ENST00000589076 ST5P78524 1137 aa4.96□□□□□ -1.62
SMAD4-207ENST00000589076 EIF4HQ15056 248 aaKnown RBP4.96□□□□□ -1.62
SMAD4-207ENST00000589076 DPY19L2P1Q6NXN4 242 aa4.96□□□□□ -1.62
SMAD4-207ENST00000589076 ARHGAP36Q6ZRI8 547 aa4.96□□□□□ -1.62
SMAD4-207ENST00000589076 FILIP1Q7Z7B0 1213 aa4.96□□□□□ -1.62
SMAD4-207ENST00000589076 MTDHQ86UE4 582 aaKnown RBP4.96□□□□□ -1.62
SMAD4-207ENST00000589076 LDLRAD3Q86YD5 345 aa4.96□□□□□ -1.62
SMAD4-207ENST00000589076 LARP4BQ92615 738 aaKnown RBP4.96□□□□□ -1.62
SMAD4-207ENST00000589076 CLIP3Q96DZ5 547 aa4.96□□□□□ -1.62
SMAD4-207ENST00000589076 MPHOSPH9Q99550 1183 aa4.96□□□□□ -1.62
SMAD4-207ENST00000589076 MRPL4Q9BYD3 311 aaKnown RBP4.96□□□□□ -1.62
SMAD4-207ENST00000589076 KIAA1683Q9H0B3 1180 aa4.96□□□□□ -1.62
SMAD4-207ENST00000589076 NCOA5Q9HCD5 579 aaKnown RBP4.96□□□□□ -1.62
SMAD4-207ENST00000589076 SRPK3Q9UPE1 567 aa4.96□□□□□ -1.62
SMAD4-207ENST00000589076 PLAAQ9Y263 795 aa4.96□□□□□ -1.62
SMAD4-207ENST00000589076 A0A0G2JNJ9 132 aa4.95□□□□□ -1.62
SMAD4-207ENST00000589076 PRAMEF25A6NGN4 478 aa4.95□□□□□ -1.62
SMAD4-207ENST00000589076 MATN2O00339 956 aa4.95□□□□□ -1.62
SMAD4-207ENST00000589076 KCNQ2O43526 872 aa4.95□□□□□ -1.62
SMAD4-207ENST00000589076 MRE11P49959 708 aa4.95□□□□□ -1.62
SMAD4-207ENST00000589076 GABREP78334 506 aa4.95□□□□□ -1.62
SMAD4-207ENST00000589076 IL13RA1P78552 427 aa4.95□□□□□ -1.62
SMAD4-207ENST00000589076 DUSP8Q13202 625 aa4.95□□□□□ -1.62
SMAD4-207ENST00000589076 PCOLCEQ15113 449 aa4.95□□□□□ -1.62
SMAD4-207ENST00000589076 TKFCQ3LXA3 575 aa4.95□□□□□ -1.62
SMAD4-207ENST00000589076 DALRD3Q5D0E6 543 aaKnown RBP4.95□□□□□ -1.62
SMAD4-207ENST00000589076 FIGNQ5HY92 759 aa4.95□□□□□ -1.62
SMAD4-207ENST00000589076 ANKRD35Q8N283 1001 aa4.95□□□□□ -1.62
SMAD4-207ENST00000589076 FBXW5Q969U6 566 aa4.95□□□□□ -1.62
SMAD4-207ENST00000589076 WNK4Q96J92 1243 aa4.95□□□□□ -1.62
SMAD4-207ENST00000589076 BTBD2Q9BX70 525 aa4.95□□□□□ -1.62
SMAD4-207ENST00000589076 Q9UFV3 132 aa4.95□□□□□ -1.62
SMAD4-207ENST00000589076 CDC42EP3Q9UKI2 254 aa4.95□□□□□ -1.62
SMAD4-207ENST00000589076 PMS2P1A4D2B8 440 aa4.94□□□□□ -1.62
SMAD4-207ENST00000589076 SLC26A4O43511 780 aa4.94□□□□□ -1.62
SMAD4-207ENST00000589076 EFCAB14O75071 495 aa4.94□□□□□ -1.62
SMAD4-207ENST00000589076 HERVK_113P62684 666 aa4.94□□□□□ -1.62
SMAD4-207ENST00000589076 PABPC4Q13310 644 aaKnown RBP eCLIP4.94□□□□□ -1.62
SMAD4-207ENST00000589076 CNGB1Q14028 1251 aaPredicted RBP4.94□□□□□ -1.62
SMAD4-207ENST00000589076 CRY1Q16526 586 aa4.94□□□□□ -1.62
SMAD4-207ENST00000589076 TRIM61Q5EBN2 209 aa4.94□□□□□ -1.62
SMAD4-207ENST00000589076 FAM47CQ5HY64 1035 aa4.94□□□□□ -1.62
SMAD4-207ENST00000589076 TMPRSS6Q8IU80 811 aa4.94□□□□□ -1.62
SMAD4-207ENST00000589076 SHCBP1Q8NEM2 672 aa4.94□□□□□ -1.62
SMAD4-207ENST00000589076 PTPRN2Q92932 1015 aa4.94□□□□□ -1.62
SMAD4-207ENST00000589076 NINJ1Q92982 152 aa4.94□□□□□ -1.62
SMAD4-207ENST00000589076 TMEM176AQ96HP8 235 aa4.94□□□□□ -1.62
SMAD4-207ENST00000589076 PUS7Q96PZ0 661 aaKnown RBP4.94□□□□□ -1.62
SMAD4-207ENST00000589076 SPC25Q9HBM1 224 aa4.94□□□□□ -1.62
SMAD4-207ENST00000589076 CD2APQ9Y5K6 639 aa4.94□□□□□ -1.62
SMAD4-207ENST00000589076 DMRT1Q9Y5R6 373 aa4.94□□□□□ -1.62
SMAD4-207ENST00000589076 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.93□□□□□ -1.62
SMAD4-207ENST00000589076 FAM90A27PA6NNH2 459 aa4.93□□□□□ -1.62
SMAD4-207ENST00000589076 DNAJC6O75061 913 aa4.93□□□□□ -1.62
SMAD4-207ENST00000589076 RAPGEF3O95398 923 aa4.93□□□□□ -1.62
SMAD4-207ENST00000589076 C6orf222P0C671 652 aaPredicted RBP4.93□□□□□ -1.62
SMAD4-207ENST00000589076 PDE6AP16499 860 aa4.93□□□□□ -1.62
SMAD4-207ENST00000589076 KRT15P19012 456 aa4.93□□□□□ -1.62
SMAD4-207ENST00000589076 ECE1P42892 770 aa4.93□□□□□ -1.62
SMAD4-207ENST00000589076 MAP3K12Q12852 859 aa4.93□□□□□ -1.62
SMAD4-207ENST00000589076 STILQ15468 1287 aa4.93□□□□□ -1.62
SMAD4-207ENST00000589076 NTRK3Q16288 839 aa4.93□□□□□ -1.62
SMAD4-207ENST00000589076 TBR1Q16650 682 aa4.93□□□□□ -1.62
SMAD4-207ENST00000589076 FNDC7Q5VTL7 733 aa4.93□□□□□ -1.62
SMAD4-207ENST00000589076 TRIM68Q6AZZ1 485 aa4.93□□□□□ -1.62
SMAD4-207ENST00000589076 LARP4Q71RC2 724 aaKnown RBP eCLIP4.93□□□□□ -1.62
SMAD4-207ENST00000589076 MAMDC2Q7Z304 686 aaPredicted RBP4.93□□□□□ -1.62
SMAD4-207ENST00000589076 ULK2Q8IYT8 1036 aa4.93□□□□□ -1.62
SMAD4-207ENST00000589076 OR14K1Q8NGZ2 314 aa4.93□□□□□ -1.62
SMAD4-207ENST00000589076 SH3RF2Q8TEC5 729 aa4.93□□□□□ -1.62
SMAD4-207ENST00000589076 TTPALQ9BTX7 342 aa4.93□□□□□ -1.62
SMAD4-207ENST00000589076 KRTAP23-1A1A580 65 aa4.92□□□□□ -1.62
SMAD4-207ENST00000589076 BLACEA4D250 179 aa4.92□□□□□ -1.62
SMAD4-207ENST00000589076 AOAHP28039 575 aa4.92□□□□□ -1.62
SMAD4-207ENST00000589076 PTGS2P35354 604 aa4.92□□□□□ -1.62
SMAD4-207ENST00000589076 MASP1P48740 699 aa4.92□□□□□ -1.62
SMAD4-207ENST00000589076 C21orf62-AS1Q17RA5 79 aa4.92□□□□□ -1.62
SMAD4-207ENST00000589076 KRTAP15-1Q3LI76 137 aa4.92□□□□□ -1.62
SMAD4-207ENST00000589076 GRAMD4Q6IC98 578 aa4.92□□□□□ -1.62
SMAD4-207ENST00000589076 PTRH1Q86Y79 214 aaKnown RBP4.92□□□□□ -1.62
SMAD4-207ENST00000589076 NIM1KQ8IY84 436 aa4.92□□□□□ -1.62
SMAD4-207ENST00000589076 GSPT2Q8IYD1 628 aaKnown RBP4.92□□□□□ -1.62
SMAD4-207ENST00000589076 CALML6Q8TD86 181 aa4.92□□□□□ -1.62
SMAD4-207ENST00000589076 CFHR4Q92496 578 aa4.92□□□□□ -1.62
SMAD4-207ENST00000589076 LPPQ93052 612 aa4.92□□□□□ -1.62
SMAD4-207ENST00000589076 CLUHP3Q96NS8 147 aa4.92□□□□□ -1.62
SMAD4-207ENST00000589076 OR10A5Q9H207 317 aa4.92□□□□□ -1.62
SMAD4-207ENST00000589076 SLC2A4RGQ9NR83 387 aa4.92□□□□□ -1.62
SMAD4-207ENST00000589076 INTS7Q9NVH2 962 aaKnown RBP4.92□□□□□ -1.62
SMAD4-207ENST00000589076 IFT57Q9NWB7 429 aa4.92□□□□□ -1.62
SMAD4-207ENST00000589076 A0A1W2PRX2 142 aa4.91□□□□□ -1.62
SMAD4-207ENST00000589076 RHOBTB3O94955 611 aa4.91□□□□□ -1.62
SMAD4-207ENST00000589076 IBSPP21815 317 aaPredicted RBP4.91□□□□□ -1.62
SMAD4-207ENST00000589076 SESN2P58004 480 aaPredicted RBP4.91□□□□□ -1.62
SMAD4-207ENST00000589076 CD83Q01151 205 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms