RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 ID4P47928 161 aa9.44□□□□□ -0.9
ATG4D-210ENST00000588972 TMPRSS15P98073 1019 aa9.44□□□□□ -0.9
ATG4D-210ENST00000588972 POU4F1Q01851 419 aa9.44□□□□□ -0.9
ATG4D-210ENST00000588972 GUCY1A3Q02108 690 aa9.44□□□□□ -0.9
ATG4D-210ENST00000588972 NMIQ13287 307 aaPredicted RBP9.44□□□□□ -0.9
ATG4D-210ENST00000588972 SKOR2Q2VWA4 1001 aaPredicted RBP9.44□□□□□ -0.9
ATG4D-210ENST00000588972 HSP90AB3PQ58FF7 597 aa9.44□□□□□ -0.9
ATG4D-210ENST00000588972 CERS3Q8IU89 383 aa9.44□□□□□ -0.9
ATG4D-210ENST00000588972 PPIL6Q8IXY8 311 aa9.44□□□□□ -0.9
ATG4D-210ENST00000588972 C2orf69Q8N8R5 385 aa9.44□□□□□ -0.9
ATG4D-210ENST00000588972 NPLOC4Q8TAT6 608 aa9.44□□□□□ -0.9
ATG4D-210ENST00000588972 FRS2Q8WU20 508 aa9.44□□□□□ -0.9
ATG4D-210ENST00000588972 COX4I2Q96KJ9 171 aa9.44□□□□□ -0.9
ATG4D-210ENST00000588972 PUS7LQ9H0K6 701 aaKnown RBP9.44□□□□□ -0.9
ATG4D-210ENST00000588972 KCNH3Q9ULD8 1083 aa9.44□□□□□ -0.9
ATG4D-210ENST00000588972 ST14Q9Y5Y6 855 aa9.44□□□□□ -0.9
ATG4D-210ENST00000588972 BRCA2P51587 3418 aa9.44□□□□□ -0.9
ATG4D-210ENST00000588972 HTTP42858 3142 aa9.43□□□□□ -0.9
ATG4D-210ENST00000588972 TAF1P21675 1872 aa9.43□□□□□ -0.9
ATG4D-210ENST00000588972 SH3TC1Q8TE82 1336 aa9.43□□□□□ -0.9
ATG4D-210ENST00000588972 ADM5C9JUS6 153 aa9.43□□□□□ -0.9
ATG4D-210ENST00000588972 STXBP3O00186 592 aa9.43□□□□□ -0.9
ATG4D-210ENST00000588972 PSMD14O00487 310 aa9.43□□□□□ -0.9
ATG4D-210ENST00000588972 ZEB2O60315 1214 aa9.43□□□□□ -0.9
ATG4D-210ENST00000588972 LEFTY1O75610 366 aa9.43□□□□□ -0.9
ATG4D-210ENST00000588972 CTSKP43235 329 aa9.43□□□□□ -0.9
ATG4D-210ENST00000588972 RAB27AP51159 221 aa9.43□□□□□ -0.9
ATG4D-210ENST00000588972 KIF23Q02241 960 aaPredicted RBP9.43□□□□□ -0.9
ATG4D-210ENST00000588972 TBC1D10BQ4KMP7 808 aaPredicted RBP9.43□□□□□ -0.9
ATG4D-210ENST00000588972 CTU1Q7Z7A3 348 aaKnown RBP9.43□□□□□ -0.9
ATG4D-210ENST00000588972 NLRP10Q86W26 655 aa9.43□□□□□ -0.9
ATG4D-210ENST00000588972 TRMT2AQ8IZ69 625 aaKnown RBP9.43□□□□□ -0.9
ATG4D-210ENST00000588972 PLBD2Q8NHP8 589 aa9.43□□□□□ -0.9
ATG4D-210ENST00000588972 DCPSQ96C86 337 aaKnown RBP9.43□□□□□ -0.9
ATG4D-210ENST00000588972 PHF20Q9BVI0 1012 aa9.43□□□□□ -0.9
ATG4D-210ENST00000588972 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.43□□□□□ -0.9
ATG4D-210ENST00000588972 RNF186Q9NXI6 227 aa9.43□□□□□ -0.9
ATG4D-210ENST00000588972 NOP53Q9NZM5 478 aaKnown RBP9.43□□□□□ -0.9
ATG4D-210ENST00000588972 SAMD15Q9P1V8 674 aa9.43□□□□□ -0.9
ATG4D-210ENST00000588972 APOBEC2Q9Y235 224 aaKnown RBP9.43□□□□□ -0.9
ATG4D-210ENST00000588972 NPFFR2Q9Y5X5 522 aa9.43□□□□□ -0.9
ATG4D-210ENST00000588972 CENPFP49454 3210 aa9.43□□□□□ -0.9
ATG4D-210ENST00000588972 PAPPA2Q9BXP8 1791 aa9.42□□□□□ -0.9
ATG4D-210ENST00000588972 ARNTLO00327 626 aa9.42□□□□□ -0.9
ATG4D-210ENST00000588972 AURKAO14965 403 aa9.42□□□□□ -0.9
ATG4D-210ENST00000588972 AKAP10O43572 662 aa9.42□□□□□ -0.9
ATG4D-210ENST00000588972 SCGB1D2O95969 90 aa9.42□□□□□ -0.9
ATG4D-210ENST00000588972 GSNP06396 782 aa9.42□□□□□ -0.9
ATG4D-210ENST00000588972 CD3EP07766 207 aa9.42□□□□□ -0.9
ATG4D-210ENST00000588972 NAT1P18440 290 aa9.42□□□□□ -0.9
ATG4D-210ENST00000588972 NOS3P29474 1203 aa9.42□□□□□ -0.9
ATG4D-210ENST00000588972 TCIRG1Q13488 830 aa9.42□□□□□ -0.9
ATG4D-210ENST00000588972 TESK1Q15569 626 aa9.42□□□□□ -0.9
ATG4D-210ENST00000588972 ACBD5Q5T8D3 534 aaPredicted RBP9.42□□□□□ -0.9
ATG4D-210ENST00000588972 RSPO2Q6UXX9 243 aaPredicted RBP9.42□□□□□ -0.9
ATG4D-210ENST00000588972 DLK2Q6UY11 383 aa9.42□□□□□ -0.9
ATG4D-210ENST00000588972 DDX53Q86TM3 631 aaKnown RBP9.42□□□□□ -0.9
ATG4D-210ENST00000588972 MTDHQ86UE4 582 aaKnown RBP9.42□□□□□ -0.9
ATG4D-210ENST00000588972 KIF18BQ86Y91 864 aa9.42□□□□□ -0.9
ATG4D-210ENST00000588972 COG1Q8WTW3 980 aa9.42□□□□□ -0.9
ATG4D-210ENST00000588972 MYD88Q99836 296 aa9.42□□□□□ -0.9
ATG4D-210ENST00000588972 ZFYVE21Q9BQ24 234 aa9.42□□□□□ -0.9
ATG4D-210ENST00000588972 DBNDD1Q9H9R9 158 aa9.42□□□□□ -0.9
ATG4D-210ENST00000588972 CRTAC1Q9NQ79 661 aa9.42□□□□□ -0.9
ATG4D-210ENST00000588972 GPRC5CQ9NQ84 441 aa9.42□□□□□ -0.9
ATG4D-210ENST00000588972 TRMT112Q9UI30 125 aaKnown RBP9.42□□□□□ -0.9
ATG4D-210ENST00000588972 RNF112Q9ULX5 631 aa9.42□□□□□ -0.9
ATG4D-210ENST00000588972 MAP3K2Q9Y2U5 619 aa9.42□□□□□ -0.9
ATG4D-210ENST00000588972 PCDHA8Q9Y5H6 950 aa9.42□□□□□ -0.9
ATG4D-210ENST00000588972 BACE2Q9Y5Z0 518 aa9.42□□□□□ -0.9
ATG4D-210ENST00000588972 POLR2AP24928 1970 aaKnown RBP9.42□□□□□ -0.9
ATG4D-210ENST00000588972 ZNF609O15014 1411 aa9.41□□□□□ -0.9
ATG4D-210ENST00000588972 RTL9Q8NET4 1388 aa9.41□□□□□ -0.9
ATG4D-210ENST00000588972 ZBED9Q6R2W3 1325 aa9.41□□□□□ -0.9
ATG4D-210ENST00000588972 FAM95CA0A1B0GW59 222 aa9.41□□□□□ -0.9
ATG4D-210ENST00000588972 SHISA3A0PJX4 238 aa9.41□□□□□ -0.9
ATG4D-210ENST00000588972 PI4KAP2A4QPH2 592 aa9.41□□□□□ -0.9
ATG4D-210ENST00000588972 ZNF891A8MT65 544 aaPredicted RBP9.41□□□□□ -0.9
ATG4D-210ENST00000588972 ARVCFO00192 962 aa9.41□□□□□ -0.9
ATG4D-210ENST00000588972 GLRX3O76003 335 aaKnown RBP9.41□□□□□ -0.9
ATG4D-210ENST00000588972 CBX7O95931 251 aa9.41□□□□□ -0.9
ATG4D-210ENST00000588972 BMP3P12645 472 aa9.41□□□□□ -0.9
ATG4D-210ENST00000588972 MAP4P27816 1152 aaKnown RBP9.41□□□□□ -0.9
ATG4D-210ENST00000588972 KIR3DL1P43629 444 aa9.41□□□□□ -0.9
ATG4D-210ENST00000588972 SCNN1BP51168 640 aa9.41□□□□□ -0.9
ATG4D-210ENST00000588972 GPR85P60893 370 aa9.41□□□□□ -0.9
ATG4D-210ENST00000588972 UVSSAQ2YD98 709 aa9.41□□□□□ -0.9
ATG4D-210ENST00000588972 SFRP5Q5T4F7 317 aa9.41□□□□□ -0.9
ATG4D-210ENST00000588972 CWF19L1Q69YN2 538 aaKnown RBP9.41□□□□□ -0.9
ATG4D-210ENST00000588972 CRTC3Q6UUV7 619 aa9.41□□□□□ -0.9
ATG4D-210ENST00000588972 FAM214BQ7L5A3 538 aa9.41□□□□□ -0.9
ATG4D-210ENST00000588972 IFNL3Q8IZI9 196 aa9.41□□□□□ -0.9
ATG4D-210ENST00000588972 CNTD1Q8N815 330 aa9.41□□□□□ -0.9
ATG4D-210ENST00000588972 PI4KAP1Q8N8J0 262 aa9.41□□□□□ -0.9
ATG4D-210ENST00000588972 WFDC12Q8WWY7 111 aa9.41□□□□□ -0.9
ATG4D-210ENST00000588972 MYRFLQ96LU7 910 aa9.41□□□□□ -0.9
ATG4D-210ENST00000588972 YIPF4Q9BSR8 244 aa9.41□□□□□ -0.9
ATG4D-210ENST00000588972 ASCC2Q9H1I8 757 aaPredicted RBP9.41□□□□□ -0.9
ATG4D-210ENST00000588972 PRDM5Q9NQX1 630 aaPredicted RBP9.41□□□□□ -0.9
ATG4D-210ENST00000588972 GGA3Q9NZ52 723 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms